Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03673

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
4,104,808	+		MIT1002_03671	0.69	-0.7
4,104,846	-		MIT1002_03671	0.73	+2.3
4,104,887	-		MIT1002_03671	0.78	+0.4
4,104,944	+		MIT1002_03671	0.84	+1.1
4,104,968	+		MIT1002_03671	0.87	-1.1
4,105,070	+				+0.1
4,105,093	-				-2.1
4,105,196	+				+0.6
4,105,231	-		MIT1002_03672	0.13	-0.3
4,105,233	+		MIT1002_03672	0.13	+0.3
4,105,235	+		MIT1002_03672	0.13	+0.1
4,105,236	-		MIT1002_03672	0.13	+0.6
4,105,241	-		MIT1002_03672	0.14	-0.1
4,105,294	+		MIT1002_03672	0.23	-0.7
4,105,302	-		MIT1002_03672	0.24	-0.5
4,105,307	-		MIT1002_03672	0.25	-0.8
4,105,373	+		MIT1002_03672	0.35	-1.2
4,105,373	+		MIT1002_03672	0.35	-1.9
4,105,457	-		MIT1002_03672	0.48	-1.4
4,105,484	-		MIT1002_03672	0.52	+0.4
4,105,484	-		MIT1002_03672	0.52	-0.4
4,105,484	-		MIT1002_03672	0.52	+0.6
4,105,492	-		MIT1002_03672	0.54	+0.3
4,105,503	-		MIT1002_03672	0.55	+0.1
4,105,503	-		MIT1002_03672	0.55	-3.2
4,105,503	-		MIT1002_03672	0.55	-0.5
4,105,534	+		MIT1002_03672	0.60	+0.4
4,105,632	+		MIT1002_03672	0.75	+0.5
4,105,700	+		MIT1002_03672	0.86	-0.0
4,105,731	-				+0.6
4,105,757	-				-0.1
4,105,798	-				+2.1
4,105,801	+				-0.3
4,105,892	+		MIT1002_03673	0.44	+1.6
4,105,900	-		MIT1002_03673	0.47	-0.3
4,105,902	-		MIT1002_03673	0.48	-0.8
4,105,937	+		MIT1002_03673	0.63	-1.1
4,105,939	+		MIT1002_03673	0.63	-0.2
4,105,959	+		MIT1002_03673	0.72	-0.8
4,105,959	+		MIT1002_03673	0.72	-1.1
4,106,092	-				+1.6
4,106,319	+		MIT1002_03674	0.11	-1.2
4,106,322	-		MIT1002_03674	0.11	+3.0
4,106,329	-		MIT1002_03674	0.12	+0.3
4,106,351	-		MIT1002_03674	0.14	+0.2
4,106,354	+		MIT1002_03674	0.14	+1.2
4,106,362	-		MIT1002_03674	0.15	+1.2
4,106,409	+		MIT1002_03674	0.20	+0.5
4,106,431	-		MIT1002_03674	0.22	-1.7
4,106,433	+		MIT1002_03674	0.22	+0.6
4,106,442	-		MIT1002_03674	0.23	+3.9
4,106,478	+		MIT1002_03674	0.27	-1.4
4,106,558	-		MIT1002_03674	0.35	-0.2
4,106,574	-		MIT1002_03674	0.37	+0.3
4,106,601	+		MIT1002_03674	0.39	+1.9
4,106,725	+		MIT1002_03674	0.52	-1.0
4,106,742	-		MIT1002_03674	0.54	+0.6
4,106,760	+		MIT1002_03674	0.56	+1.0
4,106,760	+		MIT1002_03674	0.56	+1.7
4,106,855	+		MIT1002_03674	0.65	+0.2
4,106,855	-		MIT1002_03674	0.65	+0.5
4,106,858	+		MIT1002_03674	0.66	+0.7
4,106,878	+		MIT1002_03674	0.68	+1.3
4,106,878	+		MIT1002_03674	0.68	+1.4
4,106,901	+		MIT1002_03674	0.70	+1.6