Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03633

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
4,057,591	-				+0.6
4,057,591	-				-0.5
4,057,591	-				+0.7
4,057,609	+				-0.5
4,057,622	+				-1.0
4,057,640	-				+0.5
4,057,644	+				-0.4
4,057,644	+				+0.0
4,057,684	-				+0.7
4,057,698	+				-0.4
4,057,698	+				-1.0
4,057,706	-				-1.1
4,057,720	-				-0.9
4,057,730	-				-0.8
4,057,730	-				+2.2
4,057,766	-				-1.7
4,057,841	+		MIT1002_03632	0.18	-0.0
4,057,947	-		MIT1002_03632	0.33	+1.1
4,057,991	-		MIT1002_03632	0.39	-0.1
4,058,019	+		MIT1002_03632	0.43	+0.4
4,058,027	-		MIT1002_03632	0.44	-0.6
4,058,105	+		MIT1002_03632	0.56	-0.0
4,058,352	-				+0.9
4,058,352	-				+2.4
4,058,352	-				+0.8
4,058,383	-				+1.0
4,058,408	-				-1.7
4,058,484	-				-0.1
4,058,506	+				+1.0
4,058,638	-		MIT1002_03633	0.11	-0.3
4,058,695	+		MIT1002_03633	0.13	-0.8
4,058,736	+		MIT1002_03633	0.15	+0.7
4,058,744	-		MIT1002_03633	0.16	-0.9
4,058,749	-		MIT1002_03633	0.16	+0.3
4,058,975	+		MIT1002_03633	0.27	-1.9
4,058,987	+		MIT1002_03633	0.28	+0.1
4,059,065	+		MIT1002_03633	0.32	+0.1
4,059,093	+		MIT1002_03633	0.33	+0.6
4,059,101	-		MIT1002_03633	0.33	-1.1
4,059,101	-		MIT1002_03633	0.33	-0.0
4,059,101	-		MIT1002_03633	0.33	+0.2
4,059,101	-		MIT1002_03633	0.33	-0.8
4,059,224	+		MIT1002_03633	0.39	+1.7
4,059,259	-		MIT1002_03633	0.41	-0.3
4,059,299	-		MIT1002_03633	0.43	-0.0
4,059,346	-		MIT1002_03633	0.45	-0.5
4,059,355	-		MIT1002_03633	0.46	+0.3
4,059,382	-		MIT1002_03633	0.47	-0.1
4,059,540	+		MIT1002_03633	0.55	-0.6
4,059,540	+		MIT1002_03633	0.55	-2.4
4,059,540	+		MIT1002_03633	0.55	-1.2
4,059,540	+		MIT1002_03633	0.55	-0.9
4,059,548	-		MIT1002_03633	0.55	-0.6
4,059,549	-		MIT1002_03633	0.55	-0.7
4,059,581	-		MIT1002_03633	0.57	-0.7
4,059,655	+		MIT1002_03633	0.60	-2.1
4,059,663	-		MIT1002_03633	0.61	+0.1
4,059,663	-		MIT1002_03633	0.61	-0.9
4,059,663	-		MIT1002_03633	0.61	+0.5
4,059,663	-		MIT1002_03633	0.61	-0.0
4,059,663	-		MIT1002_03633	0.61	-0.4
4,059,667	+		MIT1002_03633	0.61	-2.7
4,059,667	+		MIT1002_03633	0.61	+0.5
4,059,667	+		MIT1002_03633	0.61	-0.2
4,059,667	+		MIT1002_03633	0.61	+0.9
4,059,667	+		MIT1002_03633	0.61	-0.5
4,059,667	+		MIT1002_03633	0.61	-1.3
4,059,675	-		MIT1002_03633	0.61	+0.2
4,059,788	+		MIT1002_03633	0.67	+0.3
4,059,892	-		MIT1002_03633	0.72	+0.6
4,059,922	+		MIT1002_03633	0.74	+0.9
4,059,922	+		MIT1002_03633	0.74	-1.7
4,059,922	+		MIT1002_03633	0.74	+0.6
4,059,927	+		MIT1002_03633	0.74	-1.6
4,059,930	-		MIT1002_03633	0.74	-0.3
4,059,930	-		MIT1002_03633	0.74	-0.8
4,059,942	-		MIT1002_03633	0.75	-0.5
4,059,985	+		MIT1002_03633	0.77	+1.3
4,060,030	+		MIT1002_03633	0.79	+0.2
4,060,030	+		MIT1002_03633	0.79	-1.0
4,060,035	+		MIT1002_03633	0.79	+0.8
4,060,181	+		MIT1002_03633	0.86	-0.9
4,060,198	+		MIT1002_03633	0.87	+2.3
4,060,222	-		MIT1002_03633	0.88	+1.3
4,060,244	-		MIT1002_03633	0.89	-0.2
4,060,296	-				+0.9
4,060,296	-				+0.3
4,060,410	-				-0.9
4,060,436	-				-1.4
4,060,436	-				-0.1
4,060,535	-				-0.1
4,060,537	+				+0.5
4,060,547	+				-0.7
4,060,555	-				+1.0
4,060,555	-				-1.1
4,060,650	+				-0.1
4,060,655	+				-0.4
4,060,658	-				-1.0
4,060,660	+				-0.0
4,060,660	+				+1.6
4,060,668	-				-1.3
4,060,677	-				-0.1
4,060,731	+				+1.0
4,060,821	+				+0.8
4,060,831	+				-0.4
4,060,885	-		MIT1002_03634	0.19	-0.3
4,061,017	+		MIT1002_03634	0.43	-0.9
4,061,025	-		MIT1002_03634	0.44	-1.4
4,061,025	-		MIT1002_03634	0.44	+1.0
4,061,025	-		MIT1002_03634	0.44	+1.2
4,061,086	+		MIT1002_03634	0.55	+1.3
4,061,094	-		MIT1002_03634	0.57	-0.9
4,061,115	+		MIT1002_03634	0.60	-0.6
4,061,156	-		MIT1002_03634	0.68	+1.5
4,061,158	+		MIT1002_03634	0.68	+0.8
4,061,233	-		MIT1002_03634	0.81	-0.8
4,061,268	-		MIT1002_03634	0.88	+0.6
4,061,268	-		MIT1002_03634	0.88	-1.2
4,061,321	+				+0.8
4,061,321	+				-1.8
4,061,329	-				-0.2
4,061,329	-				+0.1
4,061,432	-				-1.5
4,061,455	-		MIT1002_03635	0.12	-0.3