Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03542

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
3,959,201	-		MIT1002_03541	0.62	+0.1
3,959,244	+		MIT1002_03541	0.65	+0.1
3,959,257	-		MIT1002_03541	0.66	+0.9
3,959,357	+		MIT1002_03541	0.72	-1.4
3,959,439	+		MIT1002_03541	0.77	-1.6
3,959,464	-		MIT1002_03541	0.79	-3.0
3,959,706	+				-1.3
3,959,713	+				-0.1
3,959,747	+				+0.9
3,959,755	-				+0.6
3,959,884	-				-0.4
3,959,950	+				+1.9
3,959,993	+				-0.4
3,959,993	+				+1.6
3,960,068	+				-0.4
3,960,068	+				-0.8
3,960,068	+				+2.8
3,960,068	+				+0.3
3,960,068	+				-0.1
3,960,068	+				-0.0
3,960,068	+				-0.2
3,960,068	+				-0.3
3,960,068	+				+0.7
3,960,068	+				+0.4
3,960,068	+				-0.2
3,960,068	+				+0.4
3,960,068	+				-0.5
3,960,068	+				+0.1
3,960,068	+				-1.8
3,960,068	+				+3.4
3,960,070	+				+0.0
3,960,076	-				+1.1
3,960,076	-				+0.6
3,960,076	-				+1.1
3,960,076	-				+3.0
3,960,076	-				-1.1
3,960,076	-				-0.3
3,960,076	-				+0.6
3,960,076	-				-0.3
3,960,076	-				+1.6
3,960,076	-				+1.6
3,960,076	-				+0.9
3,960,076	-				+1.3
3,960,076	-				+1.8
3,960,076	-				+0.3
3,960,076	-				-0.5
3,960,076	-				+0.5
3,960,135	-				-1.7
3,960,153	+				+1.0
3,960,153	+				-2.4
3,960,251	+		MIT1002_03542	0.24	-0.5
3,960,251	+		MIT1002_03542	0.24	+0.1
3,960,328	+		MIT1002_03542	0.39	-0.6
3,960,328	+		MIT1002_03542	0.39	+0.0
3,960,353	-		MIT1002_03542	0.44	-0.2
3,960,379	+		MIT1002_03542	0.48	-0.4
3,960,480	-		MIT1002_03542	0.68	+1.1
3,960,485	-		MIT1002_03542	0.69	+1.9
3,960,528	+		MIT1002_03542	0.77	+0.4
3,960,656	+				-1.1
3,960,738	+				-0.1
3,960,738	+				+0.3
3,960,738	+				+1.0
3,960,738	+				-0.3
3,960,746	-				-0.4
3,960,746	-				+0.4