Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03532

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
3,950,748	+		MIT1002_03530	0.74	+0.6
3,950,758	+		MIT1002_03530	0.74	-0.4
3,950,758	+		MIT1002_03530	0.74	-0.2
3,950,758	+		MIT1002_03530	0.74	-0.6
3,950,766	-		MIT1002_03530	0.75	-0.1
3,950,766	-		MIT1002_03530	0.75	+0.1
3,950,822	-		MIT1002_03530	0.78	-0.5
3,950,932	-		MIT1002_03530	0.85	-0.7
3,951,043	-				-0.4
3,951,043	-				+1.9
3,951,107	+				-1.2
3,951,122	-				+0.1
3,951,182	+				+0.3
3,951,196	+				+0.4
3,951,230	-		MIT1002_03531	0.29	-1.8
3,951,249	+		MIT1002_03531	0.40	-0.9
3,951,269	+		MIT1002_03531	0.51	-1.2
3,951,272	-		MIT1002_03531	0.53	-1.8
3,951,295	-		MIT1002_03531	0.66	-0.5
3,951,535	+				+1.8
3,951,627	-				-1.3
3,951,634	-				-0.4
3,951,758	+				+0.9
3,951,758	+				+2.3
3,951,758	+				+0.9
3,951,766	-		MIT1002_03532	0.10	-1.1
3,951,766	-		MIT1002_03532	0.10	+0.2
3,951,766	-		MIT1002_03532	0.10	-0.7
3,951,766	-		MIT1002_03532	0.10	+0.1
3,951,778	+		MIT1002_03532	0.11	-1.1
3,951,778	+		MIT1002_03532	0.11	+1.9
3,951,786	-		MIT1002_03532	0.12	+0.8
3,951,786	-		MIT1002_03532	0.12	-0.7
3,951,786	-		MIT1002_03532	0.12	+1.3
3,951,786	-		MIT1002_03532	0.12	+2.5
3,951,786	-		MIT1002_03532	0.12	+0.8
3,951,786	-		MIT1002_03532	0.12	+0.6
3,951,813	+		MIT1002_03532	0.14	+0.1
3,951,856	+		MIT1002_03532	0.17	-0.5
3,951,864	-		MIT1002_03532	0.17	-0.2
3,951,923	-		MIT1002_03532	0.22	+0.1
3,951,970	+		MIT1002_03532	0.25	-0.4
3,951,970	+		MIT1002_03532	0.25	-0.8
3,951,978	-		MIT1002_03532	0.26	-1.2
3,951,978	-		MIT1002_03532	0.26	+0.8
3,951,982	+		MIT1002_03532	0.26	+0.2
3,951,990	-		MIT1002_03532	0.27	-0.8
3,951,990	-		MIT1002_03532	0.27	+0.8
3,952,019	+		MIT1002_03532	0.29	-0.6
3,952,019	+		MIT1002_03532	0.29	+0.5
3,952,019	+		MIT1002_03532	0.29	+1.6
3,952,040	+		MIT1002_03532	0.30	-3.4
3,952,103	+		MIT1002_03532	0.35	-0.9
3,952,103	+		MIT1002_03532	0.35	+0.5
3,952,103	+		MIT1002_03532	0.35	-1.2
3,952,103	+		MIT1002_03532	0.35	+0.0
3,952,103	+		MIT1002_03532	0.35	+0.1
3,952,111	-		MIT1002_03532	0.36	+3.1
3,952,111	-		MIT1002_03532	0.36	-0.3
3,952,111	-		MIT1002_03532	0.36	-0.7
3,952,111	-		MIT1002_03532	0.36	+1.1
3,952,111	-		MIT1002_03532	0.36	+1.4
3,952,118	-		MIT1002_03532	0.36	-1.9
3,952,123	-		MIT1002_03532	0.37	+1.7
3,952,183	-		MIT1002_03532	0.41	+2.0
3,952,323	+		MIT1002_03532	0.51	-0.4
3,952,347	+		MIT1002_03532	0.53	+1.1
3,952,462	+		MIT1002_03532	0.62	+2.5
3,952,470	-		MIT1002_03532	0.62	-0.9
3,952,482	+		MIT1002_03532	0.63	+2.0
3,952,497	-		MIT1002_03532	0.64	+1.8
3,952,508	+		MIT1002_03532	0.65	-0.0
3,952,508	+		MIT1002_03532	0.65	-2.6
3,952,530	+		MIT1002_03532	0.67	-1.7
3,952,565	+		MIT1002_03532	0.69	+1.1
3,952,565	+		MIT1002_03532	0.69	-0.2
3,952,573	-		MIT1002_03532	0.70	+0.5
3,952,581	-		MIT1002_03532	0.70	-0.6
3,952,581	-		MIT1002_03532	0.70	-0.6
3,952,625	+		MIT1002_03532	0.74	+0.1
3,952,651	-		MIT1002_03532	0.76	+1.8
3,952,725	-		MIT1002_03532	0.81	+1.1
3,952,742	+		MIT1002_03532	0.82	-0.7
3,952,742	-		MIT1002_03532	0.82	-2.2
3,952,750	-		MIT1002_03532	0.83	-0.6
3,952,784	-		MIT1002_03532	0.85	+0.2
3,953,079	+				-0.9
3,953,136	+				-2.1
3,953,158	-				+1.9
3,953,217	+				-1.1
3,953,225	-				+0.0
3,953,255	-				-0.4
3,953,260	-				+0.3
3,953,266	-				-1.2
3,953,273	-				-1.5
3,953,312	-				-0.3
3,953,754	-		MIT1002_03533	0.29	+0.1