Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02887

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
3,204,447	+				-1.4
3,204,548	-				-0.2
3,204,571	-				-0.3
3,204,596	-				+0.4
3,204,601	-				+1.2
3,204,601	-				+0.6
3,204,604	+				+1.5
3,204,636	+				+0.4
3,204,730	+		MIT1002_02886	0.12	+1.4
3,204,738	-		MIT1002_02886	0.13	+0.2
3,204,739	+		MIT1002_02886	0.13	+1.1
3,204,747	-		MIT1002_02886	0.14	+1.6
3,204,829	-		MIT1002_02886	0.26	+0.1
3,204,923	+		MIT1002_02886	0.39	+0.1
3,204,923	+		MIT1002_02886	0.39	-0.3
3,204,929	-		MIT1002_02886	0.39	-0.9
3,204,933	+		MIT1002_02886	0.40	+1.1
3,204,933	+		MIT1002_02886	0.40	-1.0
3,204,965	+		MIT1002_02886	0.44	+0.7
3,204,965	+		MIT1002_02886	0.44	-0.1
3,204,965	+		MIT1002_02886	0.44	-0.3
3,204,973	-		MIT1002_02886	0.46	-0.7
3,204,973	-		MIT1002_02886	0.46	+1.0
3,204,983	-		MIT1002_02886	0.47	+2.3
3,205,009	-		MIT1002_02886	0.51	+0.2
3,205,018	-		MIT1002_02886	0.52	+1.1
3,205,110	+		MIT1002_02886	0.65	-0.6
3,205,199	+		MIT1002_02886	0.77	+1.9
3,205,207	-		MIT1002_02886	0.78	-0.3
3,205,236	+		MIT1002_02886	0.82	+0.1
3,205,244	-		MIT1002_02886	0.83	+0.8
3,205,338	+				-3.2
3,205,338	+				-0.7
3,205,346	-				-0.3
3,205,346	-				-0.5
3,205,346	-				+0.3
3,205,427	-				-0.1
3,205,462	+				-0.3
3,205,462	+				-0.9
3,205,473	-				+0.1
3,205,496	+				-0.5
3,205,576	+				-2.2
3,205,576	+				+0.2
3,205,613	-				+0.8
3,205,632	+				+1.3
3,205,633	+				+0.3
3,205,633	+				+0.9
3,205,634	+				-0.8
3,205,634	+				-0.3
3,205,634	+				-2.2
3,205,642	-				+0.2
3,205,642	-				+2.2
3,205,642	-				-1.7
3,205,642	-				-1.7
3,205,642	-				+0.6
3,205,642	-				-0.1
3,205,642	-				+2.3
3,205,642	-				-0.7
3,205,642	-				-1.7
3,205,654	+				-0.3
3,205,679	-				+0.8
3,205,681	+				-0.0
3,205,681	+				+0.6
3,205,689	-		MIT1002_02887	0.10	+0.0
3,205,730	-		MIT1002_02887	0.12	+1.2
3,205,756	-		MIT1002_02887	0.13	+0.3
3,205,766	-		MIT1002_02887	0.13	-0.5
3,205,833	+		MIT1002_02887	0.16	-0.1
3,205,932	+		MIT1002_02887	0.20	-0.9
3,205,967	-		MIT1002_02887	0.21	-0.5
3,205,982	-		MIT1002_02887	0.22	+1.4
3,205,998	+		MIT1002_02887	0.22	+0.8
3,206,031	-		MIT1002_02887	0.24	-1.5
3,206,125	-		MIT1002_02887	0.27	+0.0
3,206,162	-		MIT1002_02887	0.29	+3.5
3,206,173	-		MIT1002_02887	0.29	-0.5
3,206,181	+		MIT1002_02887	0.30	+0.5
3,206,310	-		MIT1002_02887	0.35	-0.5
3,206,357	+		MIT1002_02887	0.37	-0.5
3,206,367	+		MIT1002_02887	0.37	-0.1
3,206,374	-		MIT1002_02887	0.37	+0.2
3,206,392	-		MIT1002_02887	0.38	-0.4
3,206,445	-		MIT1002_02887	0.40	-0.9
3,206,463	-		MIT1002_02887	0.41	+2.8
3,206,465	+		MIT1002_02887	0.41	+0.3
3,206,465	+		MIT1002_02887	0.41	-0.7
3,206,473	-		MIT1002_02887	0.41	-0.9
3,206,539	+		MIT1002_02887	0.44	+0.7
3,206,596	+		MIT1002_02887	0.46	-1.1
3,206,596	+		MIT1002_02887	0.46	-0.7
3,206,614	-		MIT1002_02887	0.47	+0.5
3,206,626	-		MIT1002_02887	0.47	-0.3
3,206,651	-		MIT1002_02887	0.48	+0.7
3,206,697	+		MIT1002_02887	0.50	-2.8
3,206,754	+		MIT1002_02887	0.52	-0.1
3,206,754	+		MIT1002_02887	0.52	+0.9
3,206,762	-		MIT1002_02887	0.53	+0.2
3,206,767	-		MIT1002_02887	0.53	+0.4
3,206,813	-		MIT1002_02887	0.55	-1.3
3,206,836	-		MIT1002_02887	0.56	+1.1
3,206,974	+		MIT1002_02887	0.61	-1.9
3,206,980	+		MIT1002_02887	0.61	-0.6
3,207,018	+		MIT1002_02887	0.63	+0.4
3,207,046	+		MIT1002_02887	0.64	+0.8
3,207,158	+		MIT1002_02887	0.68	+2.2
3,207,218	-		MIT1002_02887	0.71	-0.4
3,207,307	-		MIT1002_02887	0.74	+0.1
3,207,319	-		MIT1002_02887	0.75	-0.3
3,207,327	-		MIT1002_02887	0.75	-1.1
3,207,419	+		MIT1002_02887	0.79	-0.6
3,207,507	+		MIT1002_02887	0.82	-2.0
3,207,520	+		MIT1002_02887	0.83	+1.0
3,207,645	-		MIT1002_02887	0.88	-0.7
3,207,645	-		MIT1002_02887	0.88	+0.9
3,207,814	-				-0.4
3,207,814	-				+0.5
3,207,814	-				+0.2
3,207,822	+				-0.4
3,207,931	-				-0.1
3,208,015	-				+0.1
3,208,234	+				+1.1
3,208,309	-				-0.9
3,208,344	-				+0.7
3,208,362	-				+1.0
3,208,367	-				+1.9
3,208,474	-				+0.3
3,208,600	+				+2.2
3,208,628	+				-0.7
3,208,687	-		MIT1002_02888	0.13	+1.5
3,208,747	+		MIT1002_02888	0.16	-0.6
3,208,748	+		MIT1002_02888	0.16	+0.1
3,208,760	-		MIT1002_02888	0.16	-1.3
3,208,822	+		MIT1002_02888	0.19	-0.3
3,208,830	-		MIT1002_02888	0.20	+0.7
3,208,830	-		MIT1002_02888	0.20	-1.9
3,208,830	-		MIT1002_02888	0.20	+1.2
3,208,830	-		MIT1002_02888	0.20	-0.4
3,208,830	-		MIT1002_02888	0.20	+1.5
3,208,839	-		MIT1002_02888	0.20	-1.1
3,208,863	-		MIT1002_02888	0.21	+2.0
3,208,881	-		MIT1002_02888	0.22	-0.4
3,208,886	-		MIT1002_02888	0.22	-2.8
3,208,954	-		MIT1002_02888	0.26	+1.3