Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02473

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
2,762,455	-				-0.6
2,762,521	-				+0.2
2,762,544	-				-0.2
2,762,575	-		MIT1002_02472	0.10	-0.4
2,762,663	+		MIT1002_02472	0.21	-1.8
2,762,672	-		MIT1002_02472	0.22	-0.4
2,762,672	-		MIT1002_02472	0.22	+0.0
2,762,672	-		MIT1002_02472	0.22	+0.8
2,762,697	-		MIT1002_02472	0.25	+1.5
2,762,782	-		MIT1002_02472	0.35	-1.3
2,762,813	+		MIT1002_02472	0.38	-0.4
2,762,823	-		MIT1002_02472	0.39	+1.9
2,762,841	+		MIT1002_02472	0.42	+0.4
2,762,927	-		MIT1002_02472	0.52	-1.8
2,762,928	-		MIT1002_02472	0.52	+0.4
2,762,930	+		MIT1002_02472	0.52	-1.4
2,762,930	+		MIT1002_02472	0.52	+1.2
2,762,930	+		MIT1002_02472	0.52	-0.1
2,762,938	-		MIT1002_02472	0.53	-0.2
2,762,938	-		MIT1002_02472	0.53	-1.4
2,762,999	+		MIT1002_02472	0.60	-1.6
2,762,999	+		MIT1002_02472	0.60	-1.3
2,763,007	-		MIT1002_02472	0.61	+0.6
2,763,007	-		MIT1002_02472	0.61	+0.0
2,763,007	-		MIT1002_02472	0.61	-0.8
2,763,007	-		MIT1002_02472	0.61	+3.4
2,763,009	+		MIT1002_02472	0.61	-0.8
2,763,009	+		MIT1002_02472	0.61	+0.6
2,763,009	+		MIT1002_02472	0.61	+0.6
2,763,009	+		MIT1002_02472	0.61	+0.8
2,763,009	+		MIT1002_02472	0.61	-0.8
2,763,017	-		MIT1002_02472	0.62	+0.1
2,763,017	-		MIT1002_02472	0.62	-0.1
2,763,017	-		MIT1002_02472	0.62	-0.6
2,763,017	-		MIT1002_02472	0.62	-0.6
2,763,017	-		MIT1002_02472	0.62	-1.3
2,763,022	-		MIT1002_02472	0.63	-1.0
2,763,056	+		MIT1002_02472	0.67	-0.3
2,763,057	+		MIT1002_02472	0.67	-1.1
2,763,092	+		MIT1002_02472	0.71	-0.8
2,763,129	+		MIT1002_02472	0.76	+0.5
2,763,129	+		MIT1002_02472	0.76	+0.4
2,763,137	-		MIT1002_02472	0.77	-0.6
2,763,147	-		MIT1002_02472	0.78	-0.0
2,763,147	-		MIT1002_02472	0.78	-0.6
2,763,223	-		MIT1002_02472	0.87	+0.9
2,763,337	-				+1.1
2,763,429	+				+0.6
2,763,429	+				+0.2
2,763,439	+				+0.4
2,763,493	-		MIT1002_02473	0.13	+0.7
2,763,499	+		MIT1002_02473	0.14	+0.6
2,763,499	+		MIT1002_02473	0.14	-0.8
2,763,507	-		MIT1002_02473	0.16	+1.7
2,763,507	-		MIT1002_02473	0.16	-0.1
2,763,507	-		MIT1002_02473	0.16	+0.3
2,763,507	-		MIT1002_02473	0.16	-0.4
2,763,507	-		MIT1002_02473	0.16	+1.2
2,763,507	-		MIT1002_02473	0.16	-0.1
2,763,507	-		MIT1002_02473	0.16	+0.1
2,763,507	-		MIT1002_02473	0.16	+0.3
2,763,521	+		MIT1002_02473	0.18	-1.4
2,763,529	-		MIT1002_02473	0.19	+0.6
2,763,624	+		MIT1002_02473	0.36	+0.5
2,763,630	-		MIT1002_02473	0.37	-1.5
2,763,632	-		MIT1002_02473	0.37	+1.3
2,763,660	+		MIT1002_02473	0.42	-1.2
2,763,668	-		MIT1002_02473	0.43	+0.4
2,763,668	-		MIT1002_02473	0.43	+0.3
2,763,700	-		MIT1002_02473	0.48	+0.2
2,763,740	+		MIT1002_02473	0.55	+1.2
2,763,850	+		MIT1002_02473	0.74	-0.8
2,763,860	-		MIT1002_02473	0.75	-0.3
2,763,888	-		MIT1002_02473	0.80	+1.8
2,764,074	+				-2.9
2,764,082	-				+0.1
2,764,082	-				-1.4
2,764,083	+				+0.3
2,764,162	-				+0.7
2,764,264	-				+0.5
2,764,264	-				+1.0
2,764,428	+				+0.3
2,764,500	-		MIT1002_02474	0.11	-0.8
2,764,502	-		MIT1002_02474	0.11	-0.3
2,764,529	-		MIT1002_02474	0.15	+1.0
2,764,542	+		MIT1002_02474	0.16	-1.2
2,764,542	+		MIT1002_02474	0.16	-1.5
2,764,550	-		MIT1002_02474	0.17	-0.2
2,764,554	+		MIT1002_02474	0.18	+0.8
2,764,562	+		MIT1002_02474	0.19	+1.4
2,764,593	-		MIT1002_02474	0.23	-1.6
2,764,682	-		MIT1002_02474	0.35	+0.9
2,764,729	+		MIT1002_02474	0.41	+0.9
2,764,737	-		MIT1002_02474	0.42	-0.6
2,764,737	-		MIT1002_02474	0.42	+0.6
2,764,751	+		MIT1002_02474	0.44	-0.8
2,764,764	+		MIT1002_02474	0.46	-0.6
2,764,783	+		MIT1002_02474	0.48	+0.0
2,764,783	+		MIT1002_02474	0.48	-1.0
2,764,791	+		MIT1002_02474	0.49	+2.4
2,764,791	-		MIT1002_02474	0.49	+1.9
2,764,791	-		MIT1002_02474	0.49	-0.1
2,764,801	-		MIT1002_02474	0.50	+0.2
2,764,863	-		MIT1002_02474	0.59	-0.3
2,764,863	-		MIT1002_02474	0.59	-0.4
2,764,876	+		MIT1002_02474	0.60	-0.8
2,764,884	-		MIT1002_02474	0.61	-1.2