Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02357

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
2,625,093	+		MIT1002_02354	0.16	+0.7
2,625,104	+		MIT1002_02354	0.21	-2.3
2,625,106	+		MIT1002_02354	0.22	-0.8
2,625,157	+		MIT1002_02354	0.46	-0.6
2,625,158	+		MIT1002_02354	0.46	+0.5
2,625,164	+		MIT1002_02354	0.49	-0.1
2,625,216	+		MIT1002_02354	0.73	-1.1
2,625,221	+		MIT1002_02354	0.75	-0.9
2,625,365	-				-0.5
2,625,372	+				-1.1
2,625,406	+				-0.4
2,625,449	-				+0.1
2,625,530	+		MIT1002_02355	0.37	-0.7
2,625,555	-		MIT1002_02355	0.46	+0.6
2,625,611	+		MIT1002_02355	0.67	+0.4
2,625,611	+		MIT1002_02355	0.67	+0.6
2,625,629	-		MIT1002_02355	0.74	-0.6
2,625,666	-		MIT1002_02355	0.88	-0.7
2,625,666	-		MIT1002_02355	0.88	+1.1
2,625,676	-				+0.4
2,625,687	+				+0.3
2,625,687	+				-0.8
2,625,695	-				+1.6
2,625,695	-				-2.2
2,625,702	+				+0.3
2,625,993	-		MIT1002_02356	0.83	+0.1
2,625,993	-		MIT1002_02356	0.83	+0.1
2,626,000	+		MIT1002_02356	0.85	+0.8
2,626,032	+				-0.3
2,626,106	+				-0.0
2,626,126	+		MIT1002_02357	0.10	+3.0
2,626,126	+		MIT1002_02357	0.10	-0.9
2,626,129	-		MIT1002_02357	0.11	+1.0
2,626,131	+		MIT1002_02357	0.12	+0.6
2,626,134	-		MIT1002_02357	0.12	+0.5
2,626,134	-		MIT1002_02357	0.12	+0.6
2,626,134	-		MIT1002_02357	0.12	+0.4
2,626,134	-		MIT1002_02357	0.12	+0.4
2,626,139	-		MIT1002_02357	0.14	-0.6
2,626,139	-		MIT1002_02357	0.14	+1.9
2,626,201	-		MIT1002_02357	0.30	-0.2
2,626,258	-		MIT1002_02357	0.45	-1.5
2,626,258	-		MIT1002_02357	0.45	+0.4
2,626,261	+		MIT1002_02357	0.46	-0.5
2,626,349	+		MIT1002_02357	0.69	+1.5
2,626,429	-		MIT1002_02357	0.90	+0.3
2,626,513	+				-0.1
2,626,544	+				-0.2
2,626,550	+				-0.1
2,626,558	-				-0.2
2,626,728	+				+1.8
2,626,728	+				+1.3
2,626,741	-				-0.1
2,626,756	+				-1.1
2,626,774	-				-1.1
2,626,807	+				-0.4
2,626,927	-				-1.2
2,626,993	+				+0.1
2,627,057	+				-0.5
2,627,071	+				-0.0
2,627,076	+				+1.8
2,627,084	-				+0.7
2,627,106	+				+0.1
2,627,199	+		MIT1002_02358	0.14	-1.1
2,627,254	-		MIT1002_02358	0.27	+0.7
2,627,254	-		MIT1002_02358	0.27	-0.3
2,627,254	-		MIT1002_02358	0.27	+1.1
2,627,277	+		MIT1002_02358	0.33	-2.9
2,627,279	+		MIT1002_02358	0.34	+0.1
2,627,279	+		MIT1002_02358	0.34	+3.2
2,627,279	+		MIT1002_02358	0.34	-0.5
2,627,415	-		MIT1002_02358	0.67	-0.9
2,627,461	+		MIT1002_02358	0.78	-0.3