Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01942

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
2,156,401	+				-1.6
2,156,540	+				+0.3
2,156,542	+				+1.5
2,156,548	-				+0.2
2,156,548	-				-0.6
2,156,554	+				+0.3
2,156,612	+				-1.8
2,156,625	-				-0.2
2,156,688	+		MIT1002_01942	0.11	+0.1
2,156,778	-		MIT1002_01942	0.33	+0.9
2,156,801	+		MIT1002_01942	0.38	-0.1
2,156,845	+		MIT1002_01942	0.48	+0.5
2,156,943	+		MIT1002_01942	0.72	-0.3
2,156,943	+		MIT1002_01942	0.72	+0.2
2,156,984	+		MIT1002_01942	0.81	+0.2
2,156,992	-		MIT1002_01942	0.83	+2.7
2,157,065	-				-1.6
2,157,065	-				+2.8
2,157,088	-				-0.5
2,157,130	+				-0.8
2,157,130	+				-1.3
2,157,138	-				+0.1
2,157,138	-				+2.1