Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01726

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
1,919,565	+				+0.0
1,919,565	-				-0.2
1,919,582	-				-0.8
1,919,585	-				+4.2
1,919,585	-				-3.6
1,919,585	-				-0.2
1,919,628	+				-0.4
1,919,647	+				+0.2
1,919,679	+				-1.0
1,919,679	+				-0.1
1,919,679	+				+1.1
1,919,687	-		MIT1002_01725	0.10	-0.5
1,919,687	-		MIT1002_01725	0.10	+1.0
1,919,687	-		MIT1002_01725	0.10	-2.4
1,919,687	-		MIT1002_01725	0.10	+1.1
1,919,687	-		MIT1002_01725	0.10	-0.6
1,919,687	-		MIT1002_01725	0.10	+0.9
1,919,687	-		MIT1002_01725	0.10	-0.4
1,919,725	+		MIT1002_01725	0.14	-0.9
1,919,725	+		MIT1002_01725	0.14	+0.3
1,919,725	+		MIT1002_01725	0.14	+0.5
1,919,725	+		MIT1002_01725	0.14	+1.4
1,919,733	-		MIT1002_01725	0.15	+1.6
1,919,734	-		MIT1002_01725	0.15	+0.5
1,919,759	-		MIT1002_01725	0.18	+0.8
1,919,811	+		MIT1002_01725	0.23	+0.5
1,919,866	-		MIT1002_01725	0.29	+2.4
1,919,888	+		MIT1002_01725	0.32	-0.3
1,919,896	-		MIT1002_01725	0.32	+0.5
1,919,948	+		MIT1002_01725	0.38	+0.4
1,920,059	+		MIT1002_01725	0.50	-1.8
1,920,085	-		MIT1002_01725	0.53	-0.2
1,920,087	+		MIT1002_01725	0.53	+1.0
1,920,126	+		MIT1002_01725	0.57	+0.2
1,920,204	-		MIT1002_01725	0.65	+0.2
1,920,332	+		MIT1002_01725	0.79	+1.8
1,920,392	+		MIT1002_01725	0.85	-0.4
1,920,409	+		MIT1002_01725	0.87	-0.8
1,920,417	-		MIT1002_01725	0.88	+1.1
1,920,417	-		MIT1002_01725	0.88	-0.3
1,920,440	+				-1.9
1,920,448	+				-1.0
1,920,507	+				+0.7
1,920,507	+				-0.2
1,920,685	-		MIT1002_01726	0.21	-1.2
1,920,692	-		MIT1002_01726	0.22	+0.6
1,920,700	+		MIT1002_01726	0.23	+0.5
1,920,748	-		MIT1002_01726	0.30	+1.6
1,920,748	-		MIT1002_01726	0.30	+0.5
1,920,752	+		MIT1002_01726	0.31	+0.2
1,920,863	+		MIT1002_01726	0.46	+0.9
1,920,863	+		MIT1002_01726	0.46	-2.4
1,920,930	-		MIT1002_01726	0.56	-1.0
1,921,033	+		MIT1002_01726	0.70	-0.4
1,921,033	+		MIT1002_01726	0.70	+1.8
1,921,039	-		MIT1002_01726	0.71	+0.9
1,921,104	-		MIT1002_01726	0.80	-1.6
1,921,105	-		MIT1002_01726	0.81	-0.5
1,921,144	-		MIT1002_01726	0.86	-2.5
1,921,150	-		MIT1002_01726	0.87	-0.3
1,921,154	-		MIT1002_01726	0.87	+3.7
1,921,154	-		MIT1002_01726	0.87	-0.2
1,921,190	-				+0.9
1,921,198	+				-2.5
1,921,198	+				-0.6
1,921,198	+				-0.6
1,921,206	-				+0.6
1,921,206	-				-0.1
1,921,206	-				-1.2
1,921,206	-				+1.0
1,921,208	+				+1.6
1,921,255	-				+0.9
1,921,289	+				+1.0
1,921,413	+		MIT1002_01727	0.19	-0.4
1,921,413	+		MIT1002_01727	0.19	+0.7
1,921,413	+		MIT1002_01727	0.19	+0.7
1,921,421	-		MIT1002_01727	0.20	+1.2
1,921,479	-		MIT1002_01727	0.30	-0.7
1,921,558	+		MIT1002_01727	0.43	+0.2
1,921,571	-		MIT1002_01727	0.45	+0.0
1,921,588	-		MIT1002_01727	0.47	-0.2
1,921,838	+		MIT1002_01727	0.88	+0.1
1,921,894	+				+1.0
1,921,899	+				+2.0
1,921,899	+				-0.6
1,921,902	-				-0.6
1,921,922	-				+1.8
1,921,967	-				-0.2
1,921,991	-				-0.9