Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01493

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
1,650,062	-		MIT1002_01491	0.59	-0.6
1,650,084	+		MIT1002_01491	0.63	-1.0
1,650,092	-		MIT1002_01491	0.65	-0.9
1,650,131	-		MIT1002_01491	0.72	+0.9
1,650,139	-		MIT1002_01491	0.73	+1.0
1,650,139	-		MIT1002_01491	0.73	+1.7
1,650,160	+		MIT1002_01491	0.77	+1.8
1,650,207	-		MIT1002_01491	0.85	-0.0
1,650,207	-		MIT1002_01491	0.85	+0.5
1,650,260	-				-1.3
1,650,303	-				+0.8
1,650,403	+				-0.6
1,650,414	+				-1.7
1,650,422	-				+2.8
1,650,506	-		MIT1002_01492	0.20	-0.3
1,650,506	-		MIT1002_01492	0.20	-1.5
1,650,508	-		MIT1002_01492	0.20	-1.5
1,650,552	+		MIT1002_01492	0.28	-2.1
1,650,650	-		MIT1002_01492	0.43	+0.3
1,650,676	-		MIT1002_01492	0.48	-0.4
1,650,676	-		MIT1002_01492	0.48	-0.7
1,650,737	+		MIT1002_01492	0.57	-0.4
1,650,738	-		MIT1002_01492	0.57	-0.4
1,650,738	-		MIT1002_01492	0.57	+0.9
1,650,743	-		MIT1002_01492	0.58	+0.4
1,650,786	-		MIT1002_01492	0.65	-0.9
1,650,787	+		MIT1002_01492	0.65	+0.4
1,650,793	+		MIT1002_01492	0.66	-1.0
1,650,797	+		MIT1002_01492	0.67	+0.3
1,650,803	+		MIT1002_01492	0.68	+0.6
1,650,803	+		MIT1002_01492	0.68	+0.0
1,650,803	+		MIT1002_01492	0.68	-0.4
1,650,803	+		MIT1002_01492	0.68	+0.1
1,650,803	+		MIT1002_01492	0.68	-0.5
1,650,803	+		MIT1002_01492	0.68	-0.3
1,650,803	+		MIT1002_01492	0.68	+1.6
1,650,803	+		MIT1002_01492	0.68	-2.0
1,650,803	+		MIT1002_01492	0.68	+0.2
1,650,803	+		MIT1002_01492	0.68	-0.3
1,650,803	+		MIT1002_01492	0.68	+0.7
1,650,811	-		MIT1002_01492	0.69	+0.4
1,650,811	-		MIT1002_01492	0.69	-0.5
1,650,811	-		MIT1002_01492	0.69	+0.4
1,650,811	-		MIT1002_01492	0.69	-0.2
1,650,811	-		MIT1002_01492	0.69	+0.1
1,650,811	-		MIT1002_01492	0.69	+0.9
1,650,811	-		MIT1002_01492	0.69	+0.4
1,650,811	-		MIT1002_01492	0.69	+0.6
1,650,820	-		MIT1002_01492	0.71	-0.0
1,650,835	-		MIT1002_01492	0.73	+0.0
1,650,848	+		MIT1002_01492	0.75	+0.1
1,650,850	+		MIT1002_01492	0.76	+0.8
1,650,861	+		MIT1002_01492	0.77	-0.3
1,650,862	+		MIT1002_01492	0.77	+0.8
1,650,986	+				-0.5
1,650,986	+				-0.1
1,650,986	+				+0.9
1,650,991	+				+0.5
1,650,994	-				-1.7
1,650,994	-				+0.0
1,651,122	+		MIT1002_01493	0.11	-0.1
1,651,128	-		MIT1002_01493	0.12	+1.4
1,651,130	-		MIT1002_01493	0.12	-0.3
1,651,140	+		MIT1002_01493	0.13	+0.9
1,651,142	+		MIT1002_01493	0.14	+0.0
1,651,148	-		MIT1002_01493	0.15	+0.1
1,651,236	-		MIT1002_01493	0.28	-1.0
1,651,313	+		MIT1002_01493	0.40	+0.7
1,651,401	+		MIT1002_01493	0.53	-1.6
1,651,401	+		MIT1002_01493	0.53	-1.1
1,651,439	+		MIT1002_01493	0.59	-0.2
1,651,457	-		MIT1002_01493	0.62	+1.3
1,651,481	-		MIT1002_01493	0.65	+0.3
1,651,501	-		MIT1002_01493	0.68	-0.6
1,651,528	-		MIT1002_01493	0.72	-0.7
1,651,530	-		MIT1002_01493	0.73	-0.0
1,651,608	+		MIT1002_01493	0.85	-1.6
1,651,608	+		MIT1002_01493	0.85	+0.2
1,651,608	-		MIT1002_01493	0.85	-1.0
1,651,616	-		MIT1002_01493	0.86	-0.9
1,651,616	-		MIT1002_01493	0.86	-1.1
1,651,623	+		MIT1002_01493	0.87	-0.5
1,651,625	+		MIT1002_01493	0.87	+0.1
1,651,631	-		MIT1002_01493	0.88	-1.9
1,651,639	+		MIT1002_01493	0.89	-0.8
1,651,675	+				-0.1
1,651,708	-				-0.1
1,651,708	-				+1.7
1,651,830	-				+0.2
1,651,879	-				-0.9
1,651,920	-				-2.1
1,651,920	-				+0.4
1,652,002	-				+0.8
1,652,030	-		MIT1002_01494	0.11	+0.3
1,652,036	+		MIT1002_01494	0.11	+0.6
1,652,042	+		MIT1002_01494	0.12	-1.4
1,652,050	-		MIT1002_01494	0.12	+0.3
1,652,050	-		MIT1002_01494	0.12	-2.6
1,652,050	-		MIT1002_01494	0.12	-1.0
1,652,064	+		MIT1002_01494	0.13	-0.3
1,652,064	+		MIT1002_01494	0.13	-1.1
1,652,075	+		MIT1002_01494	0.14	-1.5
1,652,162	-		MIT1002_01494	0.20	-1.1
1,652,200	+		MIT1002_01494	0.23	-1.1
1,652,200	+		MIT1002_01494	0.23	+1.0
1,652,247	+		MIT1002_01494	0.26	-0.7
1,652,263	+		MIT1002_01494	0.27	+0.4
1,652,266	-		MIT1002_01494	0.27	-1.9
1,652,290	+		MIT1002_01494	0.29	-0.4
1,652,298	-		MIT1002_01494	0.30	+0.7
1,652,298	-		MIT1002_01494	0.30	-0.3
1,652,347	+		MIT1002_01494	0.33	-0.5
1,652,347	+		MIT1002_01494	0.33	+0.6
1,652,347	-		MIT1002_01494	0.33	-1.1
1,652,362	+		MIT1002_01494	0.34	+1.2
1,652,405	-		MIT1002_01494	0.37	-0.0
1,652,419	+		MIT1002_01494	0.38	+1.8
1,652,450	+		MIT1002_01494	0.41	-0.2
1,652,455	+		MIT1002_01494	0.41	+0.7
1,652,455	+		MIT1002_01494	0.41	-0.1
1,652,458	-		MIT1002_01494	0.41	+0.5
1,652,462	+		MIT1002_01494	0.41	-0.1
1,652,463	-		MIT1002_01494	0.41	-1.1
1,652,463	-		MIT1002_01494	0.41	-1.2
1,652,463	-		MIT1002_01494	0.41	+1.3
1,652,463	-		MIT1002_01494	0.41	+0.3
1,652,609	+		MIT1002_01494	0.52	-2.3
1,652,702	+		MIT1002_01494	0.58	-1.0
1,652,702	+		MIT1002_01494	0.58	-0.7