Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01277

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
1,408,072	+		MIT1002_01276	0.66	+0.7
1,408,137	-		MIT1002_01276	0.69	+0.2
1,408,190	+		MIT1002_01276	0.72	-0.5
1,408,197	+		MIT1002_01276	0.72	-0.4
1,408,197	+		MIT1002_01276	0.72	+0.2
1,408,232	-		MIT1002_01276	0.74	+0.8
1,408,234	-		MIT1002_01276	0.74	+1.6
1,408,292	-		MIT1002_01276	0.77	+2.4
1,408,389	-		MIT1002_01276	0.82	-1.0
1,408,390	+		MIT1002_01276	0.82	+0.5
1,408,443	+		MIT1002_01276	0.84	+4.0
1,408,449	+		MIT1002_01276	0.85	+0.0
1,408,477	-		MIT1002_01276	0.86	-0.3
1,408,479	-		MIT1002_01276	0.86	-0.2
1,408,497	-		MIT1002_01276	0.87	+0.8
1,408,545	-		MIT1002_01276	0.90	+0.9
1,408,545	-		MIT1002_01276	0.90	+0.7
1,408,586	-				+0.8
1,408,666	-				-1.3
1,408,722	-				+0.5
1,408,744	-				-1.1
1,408,760	+				-0.5
1,408,770	-				+1.1
1,408,846	-				+0.5
1,408,860	-				+1.5
1,408,938	+				-0.9
1,408,947	+				+1.1
1,408,955	-				+0.2
1,408,969	+				-0.7
1,409,074	+		MIT1002_01277	0.16	+0.5
1,409,074	+		MIT1002_01277	0.16	+1.2
1,409,082	-		MIT1002_01277	0.17	-0.4
1,409,082	-		MIT1002_01277	0.17	+0.1
1,409,082	-		MIT1002_01277	0.17	-2.4
1,409,082	-		MIT1002_01277	0.17	-0.7
1,409,082	-		MIT1002_01277	0.17	+0.3
1,409,082	-		MIT1002_01277	0.17	-1.1
1,409,102	-		MIT1002_01277	0.20	-0.0
1,409,112	-		MIT1002_01277	0.22	-1.4
1,409,184	-		MIT1002_01277	0.32	+0.8
1,409,184	-		MIT1002_01277	0.32	-0.8
1,409,184	-		MIT1002_01277	0.32	+0.7
1,409,275	+		MIT1002_01277	0.45	-1.9
1,409,363	+		MIT1002_01277	0.57	+0.5
1,409,726	+		MIT1002_01278	0.12	-0.6
1,409,816	+		MIT1002_01278	0.28	-1.2
1,409,817	-		MIT1002_01278	0.29	-0.1
1,409,818	+		MIT1002_01278	0.29	+0.6
1,409,818	+		MIT1002_01278	0.29	+0.2
1,409,818	-		MIT1002_01278	0.29	+0.0
1,409,827	+		MIT1002_01278	0.30	+0.5
1,409,835	-		MIT1002_01278	0.32	+0.7
1,409,835	-		MIT1002_01278	0.32	-0.2
1,409,843	+		MIT1002_01278	0.33	-0.3
1,409,878	+		MIT1002_01278	0.40	+0.6
1,409,931	-		MIT1002_01278	0.49	+0.6
1,409,933	+		MIT1002_01278	0.49	-0.3
1,409,933	+		MIT1002_01278	0.49	+0.8
1,409,939	-		MIT1002_01278	0.51	+1.1
1,409,939	-		MIT1002_01278	0.51	-1.1
1,409,997	-		MIT1002_01278	0.61	-3.4
1,410,022	+		MIT1002_01278	0.65	+1.5
1,410,077	+		MIT1002_01278	0.75	+0.3
1,410,077	+		MIT1002_01278	0.75	-0.2
1,410,085	-		MIT1002_01278	0.77	+0.1
1,410,085	-		MIT1002_01278	0.77	+0.2
1,410,108	+		MIT1002_01278	0.81	-0.4
1,410,121	+		MIT1002_01278	0.83	-0.4
1,410,179	+				-2.4
1,410,182	-				+0.1
1,410,187	-				+0.6
1,410,187	-				+0.8
1,410,187	-				-0.2
1,410,315	-				-0.6
1,410,321	-				-0.2
1,410,395	+				-1.1
1,410,398	-				-0.1
1,410,403	+				-0.5
1,410,411	-				-0.2
1,410,411	-				+2.0
1,410,467	+				+2.5
1,410,506	+				+1.3
1,410,506	+				+0.0
1,410,507	-				+0.6
1,410,507	-				+1.3
1,410,640	+		MIT1002_01279	0.17	-0.0