Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01245

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
1,372,415	+		MIT1002_01244	0.31	-0.3
1,372,417	-		MIT1002_01244	0.31	-0.1
1,372,559	-		MIT1002_01244	0.43	+1.5
1,372,621	-		MIT1002_01244	0.49	-0.1
1,372,709	-		MIT1002_01244	0.56	+0.8
1,372,709	-		MIT1002_01244	0.56	-0.2
1,372,928	+		MIT1002_01244	0.74	-1.4
1,372,971	-		MIT1002_01244	0.78	-1.7
1,373,015	-		MIT1002_01244	0.81	+2.0
1,373,145	-				-0.3
1,373,147	-				+0.2
1,373,154	+				+2.7
1,373,154	+				+0.1
1,373,162	-				-0.3
1,373,168	+				-0.5
1,373,240	+				+1.6
1,373,240	+				+0.2
1,373,240	+				-3.3
1,373,248	-				-0.3
1,373,411	+		MIT1002_01245	0.11	-1.1
1,373,411	+		MIT1002_01245	0.11	-0.5
1,373,448	-		MIT1002_01245	0.20	-1.3
1,373,458	-		MIT1002_01245	0.22	-0.1
1,373,482	-		MIT1002_01245	0.29	-2.4
1,373,547	+		MIT1002_01245	0.45	+1.3
1,373,553	+		MIT1002_01245	0.46	-0.7
1,373,561	-		MIT1002_01245	0.48	+0.6
1,373,561	-		MIT1002_01245	0.48	-0.9
1,373,561	-		MIT1002_01245	0.48	-1.2
1,373,596	+		MIT1002_01245	0.57	+0.8
1,373,604	-		MIT1002_01245	0.59	-1.2
1,373,649	+		MIT1002_01245	0.71	-0.2
1,373,703	+		MIT1002_01245	0.84	-0.2
1,373,703	+		MIT1002_01245	0.84	+0.4
1,373,703	+		MIT1002_01245	0.84	-1.9
1,373,869	-				-2.5
1,373,900	-				+1.2
1,373,920	+				-1.7
1,373,930	+				+1.6
1,373,930	+				+0.5
1,373,933	+				-2.7
1,373,938	-				+0.9
1,374,027	+				+0.1
1,374,171	+		MIT1002_01246	0.20	+2.4
1,374,171	+		MIT1002_01246	0.20	+0.6
1,374,171	+		MIT1002_01246	0.20	-0.4
1,374,200	+		MIT1002_01246	0.24	-0.6
1,374,265	+		MIT1002_01246	0.33	+0.8
1,374,271	-		MIT1002_01246	0.34	+0.2
1,374,278	-		MIT1002_01246	0.35	-1.0
1,374,287	-		MIT1002_01246	0.36	-0.9
1,374,323	-		MIT1002_01246	0.41	-1.2
1,374,344	+		MIT1002_01246	0.44	-1.9
1,374,367	+		MIT1002_01246	0.47	+2.2
1,374,396	+		MIT1002_01246	0.51	-0.2
1,374,491	-		MIT1002_01246	0.65	-1.3
1,374,494	+		MIT1002_01246	0.65	-1.6
1,374,517	+		MIT1002_01246	0.68	-0.7
1,374,530	-		MIT1002_01246	0.70	+0.6
1,374,532	+		MIT1002_01246	0.70	+0.9
1,374,566	+		MIT1002_01246	0.75	-2.2
1,374,574	-		MIT1002_01246	0.76	+2.2
1,374,588	+		MIT1002_01246	0.78	-0.0
1,374,588	+		MIT1002_01246	0.78	+1.2
1,374,588	+		MIT1002_01246	0.78	-1.3
1,374,588	+		MIT1002_01246	0.78	+0.2
1,374,588	+		MIT1002_01246	0.78	-0.4
1,374,588	+		MIT1002_01246	0.78	-0.4
1,374,588	+		MIT1002_01246	0.78	+1.0
1,374,588	+		MIT1002_01246	0.78	-0.1
1,374,596	-		MIT1002_01246	0.79	-2.7
1,374,596	-		MIT1002_01246	0.79	-0.0
1,374,596	-		MIT1002_01246	0.79	-2.1
1,374,596	-		MIT1002_01246	0.79	-0.5
1,374,596	-		MIT1002_01246	0.79	+0.4
1,374,604	-		MIT1002_01246	0.81	-0.6
1,374,611	+		MIT1002_01246	0.82	+0.1
1,374,632	+		MIT1002_01246	0.85	+0.1
1,374,636	+		MIT1002_01246	0.85	+0.8
1,374,689	-				-0.1