Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01096

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
1,203,308	-		MIT1002_01094	0.53	+1.6
1,203,386	+		MIT1002_01094	0.70	-0.2
1,203,574	+				+0.2
1,203,611	-		MIT1002_01095	0.13	-0.2
1,203,645	-		MIT1002_01095	0.17	-2.5
1,203,665	-		MIT1002_01095	0.20	-0.9
1,203,676	+		MIT1002_01095	0.22	+1.7
1,203,676	+		MIT1002_01095	0.22	-0.4
1,203,731	-		MIT1002_01095	0.29	+0.2
1,203,856	+		MIT1002_01095	0.45	-2.0
1,203,858	+		MIT1002_01095	0.46	-1.9
1,203,866	-		MIT1002_01095	0.47	-1.9
1,203,866	-		MIT1002_01095	0.47	-2.9
1,203,897	-		MIT1002_01095	0.51	-1.4
1,203,906	-		MIT1002_01095	0.52	-1.2
1,203,906	-		MIT1002_01095	0.52	-0.5
1,203,906	-		MIT1002_01095	0.52	-1.5
1,203,916	-		MIT1002_01095	0.53	+0.6
1,203,959	-		MIT1002_01095	0.59	-0.1
1,203,967	+		MIT1002_01095	0.60	+1.1
1,204,058	+		MIT1002_01095	0.72	-0.1
1,204,066	-		MIT1002_01095	0.73	-1.3
1,204,164	+		MIT1002_01095	0.86	+0.2
1,204,178	-		MIT1002_01095	0.88	-0.7
1,204,249	+				-2.1
1,204,271	+				-0.3
1,204,321	-		MIT1002_01096	0.16	-1.8
1,204,333	+		MIT1002_01096	0.21	-0.9
1,204,371	+		MIT1002_01096	0.35	-0.4
1,204,371	+		MIT1002_01096	0.35	+0.8
1,204,379	-		MIT1002_01096	0.38	-2.0
1,204,493	+		MIT1002_01096	0.80	-0.9
1,204,549	+				+0.5
1,204,549	+				+0.6
1,204,678	+		MIT1002_01097	0.15	-1.1
1,204,678	+		MIT1002_01097	0.15	-1.1
1,204,703	-		MIT1002_01097	0.18	+0.6
1,204,728	-		MIT1002_01097	0.22	-0.4
1,204,732	+		MIT1002_01097	0.22	-2.3
1,204,800	+		MIT1002_01097	0.31	-0.9
1,204,861	-		MIT1002_01097	0.39	-1.6
1,204,866	-		MIT1002_01097	0.39	-3.4
1,204,877	+		MIT1002_01097	0.41	-2.1
1,204,877	+		MIT1002_01097	0.41	-1.3
1,204,885	-		MIT1002_01097	0.42	-1.6
1,204,885	-		MIT1002_01097	0.42	-1.3
1,204,885	-		MIT1002_01097	0.42	-0.8
1,204,914	+		MIT1002_01097	0.46	-2.8
1,204,914	+		MIT1002_01097	0.46	+0.1
1,204,914	+		MIT1002_01097	0.46	+1.0
1,204,914	+		MIT1002_01097	0.46	-2.0
1,204,922	-		MIT1002_01097	0.47	+2.4
1,204,922	-		MIT1002_01097	0.47	-0.8
1,204,922	-		MIT1002_01097	0.47	-1.2
1,204,922	-		MIT1002_01097	0.47	-0.9
1,205,017	-		MIT1002_01097	0.59	-1.0
1,205,024	-		MIT1002_01097	0.60	-2.8
1,205,042	+		MIT1002_01097	0.62	-1.6
1,205,050	-		MIT1002_01097	0.63	+1.4
1,205,052	+		MIT1002_01097	0.63	-2.3
1,205,063	-		MIT1002_01097	0.65	-3.3
1,205,078	-		MIT1002_01097	0.67	-1.3
1,205,082	+		MIT1002_01097	0.67	-2.7
1,205,113	+		MIT1002_01097	0.71	-1.5
1,205,113	-		MIT1002_01097	0.71	-4.7
1,205,144	+		MIT1002_01097	0.75	-1.2
1,205,159	-		MIT1002_01097	0.77	-2.3
1,205,178	-		MIT1002_01097	0.79	-0.3
1,205,178	-		MIT1002_01097	0.79	-1.5
1,205,178	-		MIT1002_01097	0.79	-2.8
1,205,224	+		MIT1002_01097	0.85	-1.2
1,205,283	-				-1.6
1,205,298	-				+0.4
1,205,305	+				-3.6
1,205,313	-				-2.3
1,205,435	-				-0.8
1,205,445	+				-0.7
1,205,445	+				+0.4
1,205,445	+				-0.4
1,205,453	-				-0.2
1,205,453	-				-0.0
1,205,453	-				-0.1