Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00994

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
1,100,288	-		MIT1002_00993	0.31	-1.4
1,100,398	+		MIT1002_00993	0.39	-0.2
1,100,406	-		MIT1002_00993	0.40	+0.0
1,100,462	+		MIT1002_00993	0.44	+0.2
1,100,470	-		MIT1002_00993	0.44	-0.0
1,100,492	+		MIT1002_00993	0.46	-0.0
1,100,518	+		MIT1002_00993	0.48	-2.1
1,100,649	+		MIT1002_00993	0.57	-0.0
1,100,686	+		MIT1002_00993	0.60	-1.3
1,100,767	+		MIT1002_00993	0.66	-0.2
1,100,774	+		MIT1002_00993	0.66	-0.7
1,100,782	-		MIT1002_00993	0.67	-0.2
1,100,803	-		MIT1002_00993	0.69	+1.8
1,100,810	-		MIT1002_00993	0.69	-2.2
1,100,881	-		MIT1002_00993	0.74	-0.4
1,100,898	+		MIT1002_00993	0.75	+0.9
1,100,929	+		MIT1002_00993	0.78	-0.5
1,100,964	+		MIT1002_00993	0.80	-1.5
1,100,987	+		MIT1002_00993	0.82	+0.6
1,100,987	+		MIT1002_00993	0.82	+0.4
1,100,987	+		MIT1002_00993	0.82	+0.4
1,100,995	-		MIT1002_00993	0.83	+1.5
1,100,995	-		MIT1002_00993	0.83	+0.2
1,101,023	+		MIT1002_00993	0.85	+0.8
1,101,023	+		MIT1002_00993	0.85	+0.9
1,101,025	+		MIT1002_00993	0.85	-0.8
1,101,031	-		MIT1002_00993	0.85	-0.5
1,101,031	-		MIT1002_00993	0.85	+0.8
1,101,031	-		MIT1002_00993	0.85	-1.6
1,101,115	+				-2.0
1,101,115	+				-0.5
1,101,115	+				+1.1
1,101,123	-				-0.3
1,101,123	-				+1.2
1,101,156	+				+0.1
1,101,171	-				+0.0
1,101,186	+				-0.3
1,101,291	+				-0.4
1,101,341	+		MIT1002_00994	0.13	-0.3
1,101,382	-		MIT1002_00994	0.21	-0.1
1,101,544	-		MIT1002_00994	0.54	-1.1
1,101,583	+		MIT1002_00994	0.62	-0.5
1,101,591	-		MIT1002_00994	0.63	+0.8
1,101,594	+		MIT1002_00994	0.64	+0.3
1,101,602	-		MIT1002_00994	0.66	-0.2
1,101,625	+		MIT1002_00994	0.70	-1.2
1,101,631	+		MIT1002_00994	0.71	+0.2
1,101,834	-				-1.4
1,101,950	+				+1.1
1,101,957	-				+0.0
1,102,184	+				+9.0
1,102,356	+				+11.0
1,102,356	+				+10.8
1,102,468	-				+10.9
1,102,476	-				+10.5
1,102,600	-				+11.1
1,102,638	-				+9.9
1,102,759	+				+4.4
1,102,767	-				+1.2