Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00139

Experiment: monoculture; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 4
150,219	-		MIT1002_00138	0.12	+0.4
150,234	+		MIT1002_00138	0.14	-1.4
150,242	-		MIT1002_00138	0.14	-1.0
150,266	-		MIT1002_00138	0.17	-1.2
150,301	+		MIT1002_00138	0.20	-0.1
150,309	-		MIT1002_00138	0.21	-1.5
150,422	-		MIT1002_00138	0.33	+0.4
150,447	-		MIT1002_00138	0.35	-1.0
150,447	-		MIT1002_00138	0.35	+0.0
150,477	-		MIT1002_00138	0.38	-1.7
150,521	+		MIT1002_00138	0.43	+1.1
150,526	+		MIT1002_00138	0.43	-1.3
150,526	+		MIT1002_00138	0.43	-0.3
150,526	+		MIT1002_00138	0.43	-1.3
150,526	+		MIT1002_00138	0.43	+0.6
150,531	-		MIT1002_00138	0.44	+1.1
150,534	-		MIT1002_00138	0.44	+0.0
150,546	-		MIT1002_00138	0.45	+0.2
150,634	+		MIT1002_00138	0.54	-0.7
150,706	-		MIT1002_00138	0.62	+1.1
150,721	+		MIT1002_00138	0.63	-1.6
150,745	+		MIT1002_00138	0.66	-1.6
150,785	-		MIT1002_00138	0.70	-0.0
150,785	-		MIT1002_00138	0.70	+0.5
150,792	-		MIT1002_00138	0.71	-0.6
150,805	+		MIT1002_00138	0.72	+0.0
150,823	-		MIT1002_00138	0.74	+2.1
150,824	-		MIT1002_00138	0.74	-0.7
150,937	-		MIT1002_00138	0.85	+0.5
150,943	-		MIT1002_00138	0.86	+1.4
150,963	-		MIT1002_00138	0.88	+1.5
150,963	-		MIT1002_00138	0.88	-1.0
150,974	+		MIT1002_00138	0.89	-2.4
151,023	-				+0.5
151,033	+				+0.0
151,033	+				-0.6
151,048	+				-1.3
151,048	+				-1.2
151,048	+				-0.2
151,048	+				-0.1
151,049	-				-0.6
151,049	-				-1.7
151,049	-				-1.1
151,056	-				+0.5
151,072	+				-0.2
151,096	+				-0.0
151,121	+				-0.6
151,131	+				+1.6
151,131	+				-0.3
151,144	+				+0.7
151,144	+				+0.7
151,152	-				+0.1
151,163	-				+1.1
151,205	+				+0.1
151,213	-				-0.0
151,249	-				-0.5
151,267	-		MIT1002_00139	0.12	+0.7
151,368	+		MIT1002_00139	0.26	+0.3
151,484	+		MIT1002_00139	0.42	-0.3
151,496	+		MIT1002_00139	0.43	-0.5
151,498	+		MIT1002_00139	0.43	-2.2
151,565	+		MIT1002_00139	0.52	-0.1
151,573	-		MIT1002_00139	0.54	-0.9
151,618	-		MIT1002_00139	0.60	+0.0
151,646	+		MIT1002_00139	0.63	-0.8
151,672	-		MIT1002_00139	0.67	-0.5
151,738	-		MIT1002_00139	0.76	+0.2
151,817	-		MIT1002_00139	0.87	-0.8
151,817	-		MIT1002_00139	0.87	+0.3
151,819	-		MIT1002_00139	0.87	-1.2
151,874	+				-1.1
151,874	+				-0.2
151,877	-				-1.2
151,893	+				-0.4
151,903	-				-1.1
151,906	+				-0.2
151,927	+				+2.4
152,035	+				-0.3
152,043	-				-0.1
152,043	-				-1.3
152,043	-				+1.2
152,064	+				+0.3
152,090	-		MIT1002_00140	0.10	-0.3
152,095	+		MIT1002_00140	0.11	-0.8
152,100	+		MIT1002_00140	0.12	+2.0
152,100	-		MIT1002_00140	0.12	-0.5
152,152	-		MIT1002_00140	0.23	+0.7
152,164	+		MIT1002_00140	0.25	-0.3
152,172	-		MIT1002_00140	0.27	+0.0
152,172	-		MIT1002_00140	0.27	+0.7
152,207	+		MIT1002_00140	0.34	+0.7
152,236	+		MIT1002_00140	0.40	-0.3
152,264	+		MIT1002_00140	0.46	-1.2
152,337	+		MIT1002_00140	0.61	+0.2
152,345	-		MIT1002_00140	0.62	+0.1
152,451	-		MIT1002_00140	0.84	-0.3
152,492	-				-0.1
152,517	+				+0.1
152,592	+				+1.2
152,621	+				-0.4
152,656	-				-2.5
152,738	-				-0.4
152,738	-				+0.7
152,856	-		MIT1002_00141	0.18	-1.3
152,867	-		MIT1002_00141	0.18	-1.0