Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17550

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,849,354	+		LRK53_RS17545	0.86	-0.1
3,849,354	+		LRK53_RS17545	0.86	-0.5
3,849,355	-		LRK53_RS17545	0.86	+0.3
3,849,355	-		LRK53_RS17545	0.86	+1.1
3,849,355	-		LRK53_RS17545	0.86	+1.6
3,849,355	-		LRK53_RS17545	0.86	-0.9
3,849,355	-		LRK53_RS17545	0.86	+0.4
3,849,355	-		LRK53_RS17545	0.86	-0.9
3,849,455	+		LRK53_RS17545	0.89	+0.3
3,849,455	+		LRK53_RS17545	0.89	-1.3
3,849,455	+		LRK53_RS17545	0.89	-1.0
3,849,456	-		LRK53_RS17545	0.89	-0.5
3,849,456	-		LRK53_RS17545	0.89	-0.3
3,849,456	-		LRK53_RS17545	0.89	-0.1
3,849,456	-		LRK53_RS17545	0.89	-0.3
3,849,456	-		LRK53_RS17545	0.89	+0.7
3,849,456	-		LRK53_RS17545	0.89	-0.2
3,849,456	-		LRK53_RS17545	0.89	-0.9
3,849,661	+				-0.0
3,849,662	-				+0.6
3,849,662	-				-1.2
3,849,662	-				-0.2
3,849,742	+				-1.2
3,849,743	-				+2.1
3,849,743	-				-1.3
3,849,859	+				-0.9
3,849,859	+				-0.1
3,849,859	+				-0.8
3,849,859	+				-0.9
3,849,860	-				-0.2
3,849,860	-				+0.1
3,849,999	+				-2.9
3,849,999	+				-0.4
3,849,999	+				-1.5
3,849,999	+				-1.0
3,850,000	-				-1.0
3,850,000	-				+0.9
3,850,000	-				-0.3
3,850,000	-				-1.8
3,850,000	-				+0.6
3,850,000	-				-1.6
3,850,000	-				-2.6
3,850,000	-				+0.0
3,850,000	-				-1.6
3,850,018	+				+0.0
3,850,019	-				-0.1
3,850,044	+				-0.3
3,850,066	+				-0.4
3,850,066	+				-0.2
3,850,067	-				-0.6
3,850,119	-				-0.8
3,850,251	+				-1.4
3,850,252	-				+0.8
3,850,346	+				-0.1
3,850,346	+				+1.0
3,850,347	-				+2.3
3,850,349	+				-1.3
3,850,349	+				+0.4
3,850,349	+				-1.9
3,850,349	+				-1.3
3,850,349	+				+0.3
3,850,349	+				+0.4
3,850,349	+				-1.4
3,850,349	+				-1.6
3,850,349	+				-0.0
3,850,349	+				-1.1
3,850,349	+				-0.7
3,850,349	+				-0.4
3,850,349	+				-0.9
3,850,349	+				-0.7
3,850,349	+				-1.4
3,850,349	+				-1.8
3,850,349	+				+0.4
3,850,349	+				+0.3
3,850,350	-				-0.3
3,850,350	-				-2.1
3,850,350	-				-0.0
3,850,350	-				-0.6
3,850,350	-				-0.8
3,850,350	-				-1.8
3,850,350	-				-0.9
3,850,350	-				-1.0
3,850,350	-				-0.4
3,850,454	-		LRK53_RS17550	0.14	-1.4
3,850,454	-		LRK53_RS17550	0.14	-2.1
3,850,637	+		LRK53_RS17550	0.38	+1.2
3,850,637	+		LRK53_RS17550	0.38	-2.9
3,850,637	+		LRK53_RS17550	0.38	-1.5
3,850,652	+		LRK53_RS17550	0.40	-0.9
3,850,652	+		LRK53_RS17550	0.40	+0.4
3,850,652	+		LRK53_RS17550	0.40	-2.2
3,850,652	+		LRK53_RS17550	0.40	-1.4
3,850,652	+		LRK53_RS17550	0.40	-1.2
3,850,652	+		LRK53_RS17550	0.40	-0.8
3,850,652	+		LRK53_RS17550	0.40	-0.0
3,850,653	-		LRK53_RS17550	0.40	-1.8
3,850,653	-		LRK53_RS17550	0.40	+0.3
3,850,653	-		LRK53_RS17550	0.40	-1.2
3,850,653	-		LRK53_RS17550	0.40	+1.1
3,851,011	+		LRK53_RS17550	0.87	-1.2
3,851,011	+		LRK53_RS17550	0.87	-1.5
3,851,011	+		LRK53_RS17550	0.87	-1.1
3,851,011	+		LRK53_RS17550	0.87	+0.1
3,851,011	+		LRK53_RS17550	0.87	-0.3
3,851,011	+		LRK53_RS17550	0.87	-2.0
3,851,011	+		LRK53_RS17550	0.87	-0.9
3,851,011	+		LRK53_RS17550	0.87	+0.3
3,851,011	+		LRK53_RS17550	0.87	-0.3
3,851,011	+		LRK53_RS17550	0.87	+1.7
3,851,011	+		LRK53_RS17550	0.87	-1.4
3,851,011	+		LRK53_RS17550	0.87	+1.3
3,851,011	+		LRK53_RS17550	0.87	+4.1
3,851,011	+		LRK53_RS17550	0.87	+0.3
3,851,011	+		LRK53_RS17550	0.87	-0.9
3,851,012	-		LRK53_RS17550	0.87	+0.6
3,851,012	-		LRK53_RS17550	0.87	+0.7
3,851,012	-		LRK53_RS17550	0.87	+0.3
3,851,012	-		LRK53_RS17550	0.87	-0.3
3,851,012	-		LRK53_RS17550	0.87	-0.9
3,851,012	-		LRK53_RS17550	0.87	+0.1
3,851,012	-		LRK53_RS17550	0.87	-0.3
3,851,012	-		LRK53_RS17550	0.87	-1.1
3,851,012	-		LRK53_RS17550	0.87	-0.7
3,851,012	-		LRK53_RS17550	0.87	-2.0
3,851,012	-		LRK53_RS17550	0.87	-1.0
3,851,219	+				-1.2
3,851,219	+				-0.2
3,851,219	-				-0.9
3,851,220	-				-1.1
3,851,525	+				+0.1
3,851,525	+				+0.6
3,851,525	+				-2.0
3,851,525	+				-0.3
3,851,525	+				-1.5
3,851,525	+				-0.2
3,851,525	+				-2.6
3,851,525	+				-1.3
3,851,525	+				+0.1
3,851,525	+				-1.8
3,851,525	+				-1.0
3,851,525	+				+0.0
3,851,525	+				-0.4
3,851,525	+				-0.7
3,851,525	+				+0.1
3,851,525	+				-1.1
3,851,525	+				-0.0
3,851,525	+				-1.6
3,851,525	+				-1.1
3,851,525	+				+2.3
3,851,525	+				-0.3
3,851,526	-				-2.0
3,851,526	-				-0.9
3,851,526	-				-2.1
3,851,526	-				-0.4
3,851,526	-				+0.5
3,851,526	-				-0.0
3,851,526	-				-2.1
3,851,526	-				+0.6
3,851,526	-				-2.0
3,851,526	-				-0.4
3,851,526	-				+0.6
3,851,526	-				-1.9
3,851,526	-				-1.4
3,851,526	-				-1.3
3,851,526	-				+0.1
3,851,526	-				-1.5
3,851,526	-				-1.3
3,851,526	-				-0.1
3,851,526	-				-0.1
3,851,526	-				-0.3
3,851,526	-				-0.3
3,851,526	-				-0.7
3,851,531	+				+0.8
3,851,531	+				-0.7
3,851,532	-				+0.6
3,851,532	-				-0.2
3,851,534	+		LRK53_RS17555	0.10	-2.0
3,851,535	-		LRK53_RS17555	0.10	-0.3
3,851,535	-		LRK53_RS17555	0.10	-1.4
3,851,535	-		LRK53_RS17555	0.10	-1.6
3,851,570	+		LRK53_RS17555	0.12	+1.1
3,851,570	+		LRK53_RS17555	0.12	-0.7
3,851,570	+		LRK53_RS17555	0.12	-0.6
3,851,570	+		LRK53_RS17555	0.12	-0.2
3,851,570	+		LRK53_RS17555	0.12	+0.1
3,851,570	+		LRK53_RS17555	0.12	+0.8
3,851,571	-		LRK53_RS17555	0.12	+1.0
3,851,603	+		LRK53_RS17555	0.13	-0.7
3,851,604	-		LRK53_RS17555	0.13	-1.6
3,851,720	+		LRK53_RS17555	0.19	+0.3
3,851,720	+		LRK53_RS17555	0.19	-1.1
3,851,720	+		LRK53_RS17555	0.19	-1.1
3,851,720	+		LRK53_RS17555	0.19	-0.6
3,851,721	-		LRK53_RS17555	0.19	-1.1
3,851,807	+		LRK53_RS17555	0.22	+2.0
3,851,807	+		LRK53_RS17555	0.22	+1.4
3,851,807	+		LRK53_RS17555	0.22	+1.0
3,851,808	-		LRK53_RS17555	0.23	-0.0
3,851,808	-		LRK53_RS17555	0.23	-1.3
3,851,808	-		LRK53_RS17555	0.23	-0.0
3,851,819	+		LRK53_RS17555	0.23	-0.8
3,851,819	+		LRK53_RS17555	0.23	-0.4
3,851,819	+		LRK53_RS17555	0.23	-1.1
3,851,819	+		LRK53_RS17555	0.23	-0.9
3,851,819	+		LRK53_RS17555	0.23	-2.2
3,851,819	+		LRK53_RS17555	0.23	-0.0
3,851,819	+		LRK53_RS17555	0.23	+0.1
3,851,819	+		LRK53_RS17555	0.23	-1.3
3,851,820	-		LRK53_RS17555	0.23	-0.2
3,851,820	-		LRK53_RS17555	0.23	-1.1
3,851,820	-		LRK53_RS17555	0.23	+1.7
3,851,820	-		LRK53_RS17555	0.23	+1.8
3,851,820	-		LRK53_RS17555	0.23	-1.3
3,851,820	-		LRK53_RS17555	0.23	-0.9
3,851,912	+		LRK53_RS17555	0.27	-0.4
3,851,912	+		LRK53_RS17555	0.27	-1.4
3,851,912	+		LRK53_RS17555	0.27	-0.9
3,851,912	+		LRK53_RS17555	0.27	-0.9
3,851,912	+		LRK53_RS17555	0.27	-0.8
3,851,912	+		LRK53_RS17555	0.27	+0.6
3,851,912	+		LRK53_RS17555	0.27	+1.6
3,851,912	+		LRK53_RS17555	0.27	+1.6
3,851,913	-		LRK53_RS17555	0.27	-0.4
3,851,913	-		LRK53_RS17555	0.27	+0.1
3,851,913	-		LRK53_RS17555	0.27	+0.8
3,851,913	-		LRK53_RS17555	0.27	-1.4
3,851,918	+		LRK53_RS17555	0.28	-0.7
3,851,919	-		LRK53_RS17555	0.28	+1.7
3,851,919	-		LRK53_RS17555	0.28	-0.0
3,852,080	+		LRK53_RS17555	0.35	-0.7
3,852,080	+		LRK53_RS17555	0.35	-1.3
3,852,080	+		LRK53_RS17555	0.35	-1.8
3,852,080	+		LRK53_RS17555	0.35	-0.8
3,852,080	+		LRK53_RS17555	0.35	+0.3
3,852,081	-		LRK53_RS17555	0.35	+0.4
3,852,081	-		LRK53_RS17555	0.35	-0.8
3,852,081	-		LRK53_RS17555	0.35	-0.4
3,852,081	-		LRK53_RS17555	0.35	-1.1