Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17425

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,824,910	+		LRK53_RS17425	0.23	-0.8
3,824,910	+		LRK53_RS17425	0.23	-2.0
3,824,910	+		LRK53_RS17425	0.23	-2.7
3,824,910	+		LRK53_RS17425	0.23	-0.2
3,824,910	+		LRK53_RS17425	0.23	-1.3
3,824,910	+		LRK53_RS17425	0.23	-1.4
3,824,910	+		LRK53_RS17425	0.23	-0.3
3,824,910	+		LRK53_RS17425	0.23	+0.1
3,824,910	+		LRK53_RS17425	0.23	+0.1
3,824,910	+		LRK53_RS17425	0.23	-2.5
3,824,911	-		LRK53_RS17425	0.23	-1.1
3,824,911	-		LRK53_RS17425	0.23	-1.9
3,824,911	-		LRK53_RS17425	0.23	-1.0
3,824,911	-		LRK53_RS17425	0.23	+0.5
3,824,911	-		LRK53_RS17425	0.23	-0.8
3,824,911	-		LRK53_RS17425	0.23	-1.3
3,824,911	-		LRK53_RS17425	0.23	-0.8
3,824,911	-		LRK53_RS17425	0.23	-3.2
3,824,911	-		LRK53_RS17425	0.23	+0.8
3,824,911	-		LRK53_RS17425	0.23	-0.9
3,824,911	-		LRK53_RS17425	0.23	-0.9
3,824,911	-		LRK53_RS17425	0.23	-0.3
3,824,911	-		LRK53_RS17425	0.23	-0.6
3,824,911	-		LRK53_RS17425	0.23	-1.1
3,825,051	+		LRK53_RS17425	0.65	+2.0
3,825,051	+		LRK53_RS17425	0.65	-0.3
3,825,185	+				-0.7
3,825,185	+				-0.5
3,825,185	+				+0.7
3,825,185	+				-1.1
3,825,185	+				+2.1
3,825,185	+				-2.5
3,825,185	+				-3.1
3,825,185	+				+0.3
3,825,185	+				-0.8
3,825,185	+				-0.8
3,825,185	+				+0.3
3,825,185	+				+1.7
3,825,185	+				-1.7
3,825,185	+				-1.6
3,825,185	+				-1.1
3,825,185	+				-1.1
3,825,185	+				-1.0
3,825,185	+				+1.3
3,825,185	+				+0.3
3,825,185	+				-1.4
3,825,185	+				+2.3
3,825,185	+				+0.1
3,825,185	+				-1.0
3,825,185	+				-0.4
3,825,185	+				-0.2
3,825,186	-				-1.7
3,825,186	-				-0.5
3,825,186	-				-3.1
3,825,186	-				-1.6
3,825,186	-				-1.0
3,825,186	-				-0.0
3,825,186	-				+1.0
3,825,186	-				-2.0
3,825,186	-				+0.5
3,825,186	-				-1.3
3,825,186	-				-0.6
3,825,186	-				-1.9
3,825,186	-				-1.3
3,825,186	-				+0.4
3,825,186	-				+1.1
3,825,186	-				-1.1
3,825,186	-				-0.7
3,825,186	-				+1.1
3,825,186	-				-1.8
3,825,186	-				+0.0
3,825,186	-				-0.4
3,825,186	-				-1.3
3,825,186	-				-0.2
3,825,232	+		LRK53_RS17430	0.10	-1.3
3,825,232	+		LRK53_RS17430	0.10	-1.6
3,825,232	+		LRK53_RS17430	0.10	-0.7
3,825,232	+		LRK53_RS17430	0.10	-1.0
3,825,232	+		LRK53_RS17430	0.10	-1.1
3,825,232	+		LRK53_RS17430	0.10	-1.3
3,825,232	+		LRK53_RS17430	0.10	+0.1
3,825,232	+		LRK53_RS17430	0.10	+0.1
3,825,232	+		LRK53_RS17430	0.10	-0.6
3,825,232	+		LRK53_RS17430	0.10	+0.3
3,825,232	+		LRK53_RS17430	0.10	-2.5
3,825,232	+		LRK53_RS17430	0.10	-1.4
3,825,232	+		LRK53_RS17430	0.10	+0.8
3,825,232	+		LRK53_RS17430	0.10	-0.6
3,825,233	-		LRK53_RS17430	0.11	+0.5
3,825,233	-		LRK53_RS17430	0.11	-0.5
3,825,233	-		LRK53_RS17430	0.11	-0.0
3,825,233	-		LRK53_RS17430	0.11	+0.7
3,825,233	-		LRK53_RS17430	0.11	-0.0
3,825,233	-		LRK53_RS17430	0.11	-2.0
3,825,233	-		LRK53_RS17430	0.11	+0.4
3,825,233	-		LRK53_RS17430	0.11	-2.1
3,825,233	-		LRK53_RS17430	0.11	-0.7
3,825,233	-		LRK53_RS17430	0.11	+1.5
3,825,233	-		LRK53_RS17430	0.11	-0.8
3,825,233	-		LRK53_RS17430	0.11	+0.3
3,825,233	-		LRK53_RS17430	0.11	-0.7
3,825,233	-		LRK53_RS17430	0.11	+0.1
3,825,233	-		LRK53_RS17430	0.11	-2.2
3,825,233	-		LRK53_RS17430	0.11	-0.5
3,825,233	-		LRK53_RS17430	0.11	-1.3
3,825,254	+		LRK53_RS17430	0.14	-0.5
3,825,255	-		LRK53_RS17430	0.14	+1.3
3,825,275	+		LRK53_RS17430	0.17	+1.2
3,825,275	+		LRK53_RS17430	0.17	-1.0
3,825,275	+		LRK53_RS17430	0.17	-2.5
3,825,275	+		LRK53_RS17430	0.17	-1.7
3,825,275	+		LRK53_RS17430	0.17	-0.8
3,825,276	-		LRK53_RS17430	0.17	-1.1
3,825,276	-		LRK53_RS17430	0.17	-1.0
3,825,276	-		LRK53_RS17430	0.17	-0.0
3,825,294	+		LRK53_RS17430	0.20	-0.3
3,825,294	+		LRK53_RS17430	0.20	+0.4
3,825,294	+		LRK53_RS17430	0.20	+0.0
3,825,294	+		LRK53_RS17430	0.20	-1.0
3,825,294	+		LRK53_RS17430	0.20	-1.5
3,825,294	+		LRK53_RS17430	0.20	+0.8
3,825,294	+		LRK53_RS17430	0.20	-0.5
3,825,294	+		LRK53_RS17430	0.20	+0.3
3,825,294	+		LRK53_RS17430	0.20	-0.9
3,825,294	+		LRK53_RS17430	0.20	-1.4
3,825,294	+		LRK53_RS17430	0.20	+1.2
3,825,294	+		LRK53_RS17430	0.20	+0.5
3,825,294	+		LRK53_RS17430	0.20	-0.9
3,825,294	+		LRK53_RS17430	0.20	+0.3
3,825,294	+		LRK53_RS17430	0.20	-0.9
3,825,294	+		LRK53_RS17430	0.20	-0.8
3,825,294	-		LRK53_RS17430	0.20	-0.7
3,825,295	-		LRK53_RS17430	0.20	-1.5
3,825,295	-		LRK53_RS17430	0.20	-1.5
3,825,295	-		LRK53_RS17430	0.20	-1.4
3,825,295	-		LRK53_RS17430	0.20	-2.2
3,825,295	-		LRK53_RS17430	0.20	-2.5
3,825,295	-		LRK53_RS17430	0.20	-0.4
3,825,295	-		LRK53_RS17430	0.20	-0.1
3,825,295	-		LRK53_RS17430	0.20	-2.1
3,825,295	-		LRK53_RS17430	0.20	-1.3
3,825,295	-		LRK53_RS17430	0.20	-0.6
3,825,295	-		LRK53_RS17430	0.20	-1.0
3,825,295	-		LRK53_RS17430	0.20	+0.5
3,825,295	-		LRK53_RS17430	0.20	+1.1
3,825,295	-		LRK53_RS17430	0.20	-1.5
3,825,295	-		LRK53_RS17430	0.20	-0.0
3,825,295	-		LRK53_RS17430	0.20	+0.1
3,825,295	-		LRK53_RS17430	0.20	+0.1
3,825,295	-		LRK53_RS17430	0.20	-0.9
3,825,295	-		LRK53_RS17430	0.20	+0.2
3,825,295	-		LRK53_RS17430	0.20	-0.3
3,825,295	-		LRK53_RS17430	0.20	+0.1
3,825,295	-		LRK53_RS17430	0.20	-2.7
3,825,296	+		LRK53_RS17430	0.20	-1.7
3,825,296	+		LRK53_RS17430	0.20	-0.6
3,825,296	+		LRK53_RS17430	0.20	-1.7
3,825,297	-		LRK53_RS17430	0.20	-2.1
3,825,297	-		LRK53_RS17430	0.20	-1.4
3,825,297	-		LRK53_RS17430	0.20	+1.1
3,825,297	-		LRK53_RS17430	0.20	-1.6
3,825,297	-		LRK53_RS17430	0.20	+0.0
3,825,297	-		LRK53_RS17430	0.20	+0.3
3,825,297	-		LRK53_RS17430	0.20	-2.2
3,825,395	+		LRK53_RS17430	0.35	-0.6
3,825,395	+		LRK53_RS17430	0.35	-0.8
3,825,395	+		LRK53_RS17430	0.35	-1.4
3,825,395	+		LRK53_RS17430	0.35	-2.7
3,825,395	+		LRK53_RS17430	0.35	-2.1
3,825,395	+		LRK53_RS17430	0.35	+0.0
3,825,395	+		LRK53_RS17430	0.35	+1.9
3,825,396	-		LRK53_RS17430	0.35	-1.2
3,825,396	-		LRK53_RS17430	0.35	-0.2
3,825,396	-		LRK53_RS17430	0.35	-2.0
3,825,396	-		LRK53_RS17430	0.35	-0.4
3,825,396	-		LRK53_RS17430	0.35	-1.0
3,825,396	-		LRK53_RS17430	0.35	-0.5
3,825,396	-		LRK53_RS17430	0.35	-2.5
3,825,396	-		LRK53_RS17430	0.35	+0.6
3,825,396	-		LRK53_RS17430	0.35	+0.8
3,825,396	-		LRK53_RS17430	0.35	-1.4
3,825,396	-		LRK53_RS17430	0.35	-1.0
3,825,396	-		LRK53_RS17430	0.35	-0.9
3,825,396	-		LRK53_RS17430	0.35	-1.3
3,825,396	-		LRK53_RS17430	0.35	+1.3
3,825,396	-		LRK53_RS17430	0.35	-0.2
3,825,420	-		LRK53_RS17430	0.39	+0.0
3,825,420	-		LRK53_RS17430	0.39	-1.2
3,825,533	+		LRK53_RS17430	0.56	-0.8
3,825,533	+		LRK53_RS17430	0.56	-1.2
3,825,533	+		LRK53_RS17430	0.56	-0.0
3,825,533	+		LRK53_RS17430	0.56	+1.5
3,825,533	+		LRK53_RS17430	0.56	+1.1
3,825,533	+		LRK53_RS17430	0.56	-0.8
3,825,533	+		LRK53_RS17430	0.56	-0.4
3,825,533	+		LRK53_RS17430	0.56	-0.7
3,825,533	+		LRK53_RS17430	0.56	+1.5
3,825,533	+		LRK53_RS17430	0.56	-1.6
3,825,533	+		LRK53_RS17430	0.56	-0.0
3,825,533	+		LRK53_RS17430	0.56	-2.6
3,825,533	+		LRK53_RS17430	0.56	+0.4
3,825,533	+		LRK53_RS17430	0.56	-1.0
3,825,533	+		LRK53_RS17430	0.56	-0.7
3,825,533	+		LRK53_RS17430	0.56	-1.4
3,825,533	+		LRK53_RS17430	0.56	-1.2
3,825,534	-		LRK53_RS17430	0.56	+0.1
3,825,534	-		LRK53_RS17430	0.56	+1.4
3,825,534	-		LRK53_RS17430	0.56	-1.0
3,825,534	-		LRK53_RS17430	0.56	+1.0
3,825,534	-		LRK53_RS17430	0.56	-2.0
3,825,534	-		LRK53_RS17430	0.56	-0.9
3,825,534	-		LRK53_RS17430	0.56	-1.8
3,825,534	-		LRK53_RS17430	0.56	-0.3
3,825,534	-		LRK53_RS17430	0.56	-1.4
3,825,534	-		LRK53_RS17430	0.56	-2.1
3,825,534	-		LRK53_RS17430	0.56	-0.4
3,825,534	-		LRK53_RS17430	0.56	-2.1
3,825,534	-		LRK53_RS17430	0.56	-2.5
3,825,534	-		LRK53_RS17430	0.56	-1.9
3,825,534	-		LRK53_RS17430	0.56	-1.0
3,825,534	-		LRK53_RS17430	0.56	-1.2
3,825,534	-		LRK53_RS17430	0.56	-0.4
3,825,534	-		LRK53_RS17430	0.56	-1.1
3,825,534	-		LRK53_RS17430	0.56	-1.2
3,825,534	-		LRK53_RS17430	0.56	-1.4
3,825,534	-		LRK53_RS17430	0.56	+0.1
3,825,534	-		LRK53_RS17430	0.56	+0.5
3,825,554	+		LRK53_RS17430	0.59	-1.8
3,825,554	+		LRK53_RS17430	0.59	-0.0
3,825,554	+		LRK53_RS17430	0.59	+0.2
3,825,554	+		LRK53_RS17430	0.59	+1.1
3,825,554	+		LRK53_RS17430	0.59	-0.6
3,825,554	+		LRK53_RS17430	0.59	-0.6
3,825,554	+		LRK53_RS17430	0.59	-0.2
3,825,554	+		LRK53_RS17430	0.59	-1.9
3,825,555	-		LRK53_RS17430	0.59	-0.2
3,825,555	-		LRK53_RS17430	0.59	-0.6
3,825,555	-		LRK53_RS17430	0.59	-0.3
3,825,555	-		LRK53_RS17430	0.59	+0.2
3,825,555	-		LRK53_RS17430	0.59	-0.5
3,825,555	-		LRK53_RS17430	0.59	-1.6
3,825,617	+		LRK53_RS17430	0.68	-1.0
3,825,617	+		LRK53_RS17430	0.68	-1.3
3,825,617	+		LRK53_RS17430	0.68	-0.0
3,825,617	+		LRK53_RS17430	0.68	-0.5
3,825,618	-		LRK53_RS17430	0.69	-1.0
3,825,618	-		LRK53_RS17430	0.69	-0.4
3,825,618	-		LRK53_RS17430	0.69	-0.6
3,825,635	+		LRK53_RS17430	0.71	-1.5
3,825,635	+		LRK53_RS17430	0.71	-0.6
3,825,635	+		LRK53_RS17430	0.71	-1.7
3,825,635	+		LRK53_RS17430	0.71	-0.0
3,825,635	+		LRK53_RS17430	0.71	+0.1
3,825,635	+		LRK53_RS17430	0.71	-1.8
3,825,635	+		LRK53_RS17430	0.71	+0.3
3,825,635	+		LRK53_RS17430	0.71	-1.6
3,825,635	+		LRK53_RS17430	0.71	-1.0
3,825,635	+		LRK53_RS17430	0.71	+0.0
3,825,635	+		LRK53_RS17430	0.71	-1.8
3,825,635	+		LRK53_RS17430	0.71	-2.0
3,825,635	+		LRK53_RS17430	0.71	+0.7
3,825,636	-		LRK53_RS17430	0.71	-0.3
3,825,636	-		LRK53_RS17430	0.71	-0.9
3,825,636	-		LRK53_RS17430	0.71	-2.3
3,825,636	-		LRK53_RS17430	0.71	-0.9
3,825,636	-		LRK53_RS17430	0.71	-1.3
3,825,636	-		LRK53_RS17430	0.71	-0.3
3,825,636	-		LRK53_RS17430	0.71	+0.2
3,825,636	-		LRK53_RS17430	0.71	-0.1
3,825,636	-		LRK53_RS17430	0.71	-0.3
3,825,636	-		LRK53_RS17430	0.71	+1.3
3,825,636	-		LRK53_RS17430	0.71	+0.0
3,825,636	-		LRK53_RS17430	0.71	-0.4
3,825,794	+				-1.1
3,825,794	+				-1.1
3,825,795	-				-0.0
3,825,854	+				-0.6
3,825,855	-				+0.5
3,825,855	-				-1.7
3,825,855	-				+0.3
3,825,855	-				+0.7
3,825,855	-				+0.8
3,825,860	-				-1.1
3,825,883	-				+0.8
3,825,908	-				-2.0
3,825,908	-				-1.4
3,825,908	-				-0.3
3,825,908	-				+0.2
3,826,011	-				-0.6
3,826,067	+				-0.2
3,826,067	+				-0.8
3,826,067	+				+0.0
3,826,067	+				-1.3
3,826,068	-				-0.0
3,826,068	-				-1.3
3,826,152	+				-1.9
3,826,152	+				-1.7
3,826,153	-				-0.0
3,826,153	-				+0.1
3,826,153	-				-2.6
3,826,153	-				-1.3
3,826,153	-				-0.8
3,826,154	+				-2.5
3,826,154	+				-2.4
3,826,154	+				-1.6
3,826,154	+				-1.1
3,826,154	+				-0.3
3,826,154	+				+0.1
3,826,154	+				+0.5
3,826,154	+				-0.7
3,826,155	-				-3.7
3,826,155	-				-0.8
3,826,155	-				+2.1
3,826,155	-				+0.1
3,826,155	-				-1.9