Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17025

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,736,686	-		LRK53_RS17020	0.34	-0.1
3,736,686	-		LRK53_RS17020	0.34	+2.1
3,736,686	-		LRK53_RS17020	0.34	-0.8
3,736,686	-		LRK53_RS17020	0.34	-2.0
3,736,686	-		LRK53_RS17020	0.34	-1.2
3,736,782	+		LRK53_RS17020	0.41	-0.9
3,736,782	+		LRK53_RS17020	0.41	-1.8
3,736,784	+		LRK53_RS17020	0.41	-1.9
3,736,784	+		LRK53_RS17020	0.41	+0.5
3,736,784	+		LRK53_RS17020	0.41	-1.4
3,736,785	-		LRK53_RS17020	0.41	-0.6
3,736,785	-		LRK53_RS17020	0.41	-2.9
3,736,837	+		LRK53_RS17020	0.45	-1.3
3,736,968	+		LRK53_RS17020	0.54	-0.6
3,736,969	-		LRK53_RS17020	0.54	-0.5
3,736,969	-		LRK53_RS17020	0.54	-0.2
3,736,969	-		LRK53_RS17020	0.54	-0.9
3,736,969	-		LRK53_RS17020	0.54	-1.6
3,736,969	-		LRK53_RS17020	0.54	-2.1
3,736,969	-		LRK53_RS17020	0.54	+0.3
3,736,969	-		LRK53_RS17020	0.54	+1.4
3,737,007	-		LRK53_RS17020	0.57	-1.5
3,737,503	+				-0.9
3,737,504	-				+0.6
3,737,504	-				+0.2
3,737,504	-				+0.5
3,737,584	+				-0.7
3,737,584	+				+0.1
3,737,584	+				-0.7
3,737,584	+				+0.1
3,737,584	+				-1.3
3,737,585	-				-2.2
3,737,585	-				-1.4
3,737,625	+				-0.1
3,737,625	+				-1.9
3,737,625	+				-1.4
3,737,625	+				+0.4
3,737,625	+				-0.8
3,737,625	+				-0.1
3,737,625	+				-0.2
3,737,625	+				-1.6
3,737,625	+				-0.6
3,737,625	+				-0.6
3,737,625	+				-0.3
3,737,625	+				-0.5
3,737,625	+				-3.0
3,737,625	+				-0.3
3,737,626	-				-0.6
3,737,626	-				-1.4
3,737,626	-				-0.8
3,737,626	-				-2.0
3,737,626	-				-0.2
3,737,626	-				-0.9
3,737,626	-				-1.7
3,737,626	-				-0.3
3,737,704	+				-1.1
3,737,704	+				-1.9
3,737,705	-				-0.2
3,737,705	-				-2.3
3,737,753	-				-0.8
3,737,753	-				-1.4
3,737,792	+		LRK53_RS17025	0.13	-1.4
3,737,792	+		LRK53_RS17025	0.13	-1.2
3,737,792	+		LRK53_RS17025	0.13	-2.7
3,737,793	-		LRK53_RS17025	0.13	+0.6
3,737,821	+		LRK53_RS17025	0.16	-2.0
3,737,821	+		LRK53_RS17025	0.16	+0.6
3,737,821	+		LRK53_RS17025	0.16	-0.9
3,737,821	+		LRK53_RS17025	0.16	+0.2
3,737,821	+		LRK53_RS17025	0.16	-1.5
3,737,821	+		LRK53_RS17025	0.16	-1.6
3,737,821	+		LRK53_RS17025	0.16	-0.8
3,737,821	+		LRK53_RS17025	0.16	-1.2
3,737,821	+		LRK53_RS17025	0.16	-0.6
3,737,822	-		LRK53_RS17025	0.16	-0.4
3,737,822	-		LRK53_RS17025	0.16	+1.4
3,737,822	-		LRK53_RS17025	0.16	+0.1
3,737,822	-		LRK53_RS17025	0.16	+0.0
3,737,822	-		LRK53_RS17025	0.16	-0.4
3,737,822	-		LRK53_RS17025	0.16	-0.6
3,737,822	-		LRK53_RS17025	0.16	-0.2
3,737,822	-		LRK53_RS17025	0.16	-2.8
3,737,822	-		LRK53_RS17025	0.16	-0.9
3,737,822	-		LRK53_RS17025	0.16	-0.1
3,737,902	+		LRK53_RS17025	0.23	-1.1
3,737,902	+		LRK53_RS17025	0.23	-0.5
3,737,902	+		LRK53_RS17025	0.23	-0.2
3,737,903	-		LRK53_RS17025	0.23	-0.9
3,737,903	-		LRK53_RS17025	0.23	+1.2
3,737,903	-		LRK53_RS17025	0.23	-1.4
3,737,903	-		LRK53_RS17025	0.23	-0.0
3,737,929	-		LRK53_RS17025	0.25	-0.6
3,737,956	-		LRK53_RS17025	0.27	-0.6
3,738,166	+		LRK53_RS17025	0.45	+1.1
3,738,166	+		LRK53_RS17025	0.45	-2.3
3,738,167	-		LRK53_RS17025	0.46	-0.9
3,738,167	-		LRK53_RS17025	0.46	-0.0
3,738,328	+		LRK53_RS17025	0.59	-0.1
3,738,328	+		LRK53_RS17025	0.59	-0.7
3,738,328	+		LRK53_RS17025	0.59	-0.2
3,738,328	+		LRK53_RS17025	0.59	-1.6
3,738,328	+		LRK53_RS17025	0.59	-2.5
3,738,329	-		LRK53_RS17025	0.59	-0.7
3,738,329	-		LRK53_RS17025	0.59	-1.4
3,738,329	-		LRK53_RS17025	0.59	-2.4
3,738,329	-		LRK53_RS17025	0.59	+0.5
3,738,329	-		LRK53_RS17025	0.59	-2.9
3,738,329	-		LRK53_RS17025	0.59	+0.5
3,738,329	-		LRK53_RS17025	0.59	-1.0
3,738,329	-		LRK53_RS17025	0.59	-1.4
3,738,329	-		LRK53_RS17025	0.59	-1.8
3,738,329	-		LRK53_RS17025	0.59	+0.1
3,738,329	-		LRK53_RS17025	0.59	+0.1
3,738,329	-		LRK53_RS17025	0.59	-1.4
3,738,329	-		LRK53_RS17025	0.59	-0.8
3,738,329	-		LRK53_RS17025	0.59	-2.5
3,738,329	-		LRK53_RS17025	0.59	-1.6
3,738,329	-		LRK53_RS17025	0.59	-0.2
3,738,332	+		LRK53_RS17025	0.60	-3.6
3,738,332	+		LRK53_RS17025	0.60	-1.3
3,738,333	-		LRK53_RS17025	0.60	-0.1
3,738,454	+		LRK53_RS17025	0.70	-1.6
3,738,454	+		LRK53_RS17025	0.70	-0.8
3,738,454	+		LRK53_RS17025	0.70	-0.7
3,738,454	+		LRK53_RS17025	0.70	-2.3
3,738,454	+		LRK53_RS17025	0.70	-0.6
3,738,454	+		LRK53_RS17025	0.70	-1.7
3,738,454	+		LRK53_RS17025	0.70	-0.8
3,738,454	+		LRK53_RS17025	0.70	-1.2
3,738,454	+		LRK53_RS17025	0.70	-0.7
3,738,454	+		LRK53_RS17025	0.70	-1.5
3,738,454	+		LRK53_RS17025	0.70	-0.8
3,738,455	-		LRK53_RS17025	0.70	-1.6
3,738,455	-		LRK53_RS17025	0.70	-1.1
3,738,455	-		LRK53_RS17025	0.70	-2.0
3,738,455	-		LRK53_RS17025	0.70	-1.6
3,738,455	-		LRK53_RS17025	0.70	-1.8
3,738,455	-		LRK53_RS17025	0.70	-0.1
3,738,455	-		LRK53_RS17025	0.70	-1.8
3,738,455	-		LRK53_RS17025	0.70	+1.1
3,738,455	-		LRK53_RS17025	0.70	-0.0
3,738,455	-		LRK53_RS17025	0.70	-1.9
3,738,455	-		LRK53_RS17025	0.70	-0.2
3,738,455	-		LRK53_RS17025	0.70	-0.2
3,738,670	+		LRK53_RS17025	0.89	-0.1
3,738,670	+		LRK53_RS17025	0.89	+0.5
3,738,670	+		LRK53_RS17025	0.89	+1.7
3,738,670	+		LRK53_RS17025	0.89	-1.5
3,738,670	+		LRK53_RS17025	0.89	+0.1
3,738,670	+		LRK53_RS17025	0.89	+1.5
3,738,670	+		LRK53_RS17025	0.89	-0.5
3,738,670	+		LRK53_RS17025	0.89	-0.3
3,738,670	+		LRK53_RS17025	0.89	-1.0
3,738,671	-		LRK53_RS17025	0.89	+0.1
3,738,671	-		LRK53_RS17025	0.89	-0.2
3,738,671	-		LRK53_RS17025	0.89	-2.8
3,738,671	-		LRK53_RS17025	0.89	-1.8
3,738,671	-		LRK53_RS17025	0.89	-2.4
3,738,769	+				-0.6
3,738,769	+				-1.8
3,738,769	+				+1.1
3,738,770	-				-1.4
3,738,770	-				+0.5
3,738,770	-				+0.4
3,738,770	-				-2.3
3,738,783	-				+1.0
3,738,783	-				-1.2
3,738,783	-				+0.2
3,738,855	+				-1.9
3,738,916	+				-0.1
3,738,916	+				-0.9
3,738,916	+				-0.4
3,738,916	+				-0.9
3,738,917	-				-0.6
3,738,917	-				-1.3
3,738,917	-				-0.1
3,738,963	+				-0.1
3,738,963	+				-0.2
3,738,963	+				+0.8
3,738,963	+				-2.3
3,738,963	+				+1.6
3,738,963	+				-1.0
3,738,963	+				-0.2
3,738,963	+				-1.9
3,738,963	+				-1.8
3,738,963	+				+0.5
3,738,963	+				-1.4
3,738,963	+				-0.2
3,738,964	-				-0.2
3,738,964	-				+1.1
3,738,964	-				-0.9
3,738,964	-				-0.2
3,738,964	-				-1.0
3,738,964	-				-0.8
3,738,964	-				-0.1
3,738,964	-				-1.2
3,738,964	-				-1.3
3,738,989	+				-0.0
3,738,989	+				-0.8
3,738,989	+				-1.2
3,738,990	-				+0.8
3,738,990	-				+2.8
3,739,369	+		LRK53_RS17030	0.27	-0.8
3,739,369	+		LRK53_RS17030	0.27	+0.2
3,739,369	+		LRK53_RS17030	0.27	-0.4
3,739,369	+		LRK53_RS17030	0.27	-0.6
3,739,369	+		LRK53_RS17030	0.27	-0.3
3,739,369	+		LRK53_RS17030	0.27	-1.8
3,739,370	-		LRK53_RS17030	0.27	-0.1
3,739,370	-		LRK53_RS17030	0.27	+0.0
3,739,370	-		LRK53_RS17030	0.27	-1.7
3,739,370	-		LRK53_RS17030	0.27	+0.1
3,739,492	+		LRK53_RS17030	0.35	-0.1
3,739,493	-		LRK53_RS17030	0.35	-0.3
3,739,493	-		LRK53_RS17030	0.35	+0.9
3,739,717	+		LRK53_RS17030	0.50	-1.2
3,739,717	+		LRK53_RS17030	0.50	+0.4
3,739,717	+		LRK53_RS17030	0.50	+0.9
3,739,718	-		LRK53_RS17030	0.50	-0.9
3,739,718	-		LRK53_RS17030	0.50	-0.8
3,739,718	-		LRK53_RS17030	0.50	+1.1
3,739,718	-		LRK53_RS17030	0.50	-0.8
3,739,718	-		LRK53_RS17030	0.50	-1.9
3,739,768	+		LRK53_RS17030	0.53	-1.3
3,739,768	+		LRK53_RS17030	0.53	-1.6
3,739,768	+		LRK53_RS17030	0.53	-0.9
3,739,769	-		LRK53_RS17030	0.53	-0.5
3,739,769	-		LRK53_RS17030	0.53	-0.6
3,739,792	+		LRK53_RS17030	0.55	-1.6
3,739,792	+		LRK53_RS17030	0.55	+0.5
3,739,792	+		LRK53_RS17030	0.55	+0.1
3,739,792	+		LRK53_RS17030	0.55	-2.0
3,739,792	+		LRK53_RS17030	0.55	+0.1
3,739,793	-		LRK53_RS17030	0.55	-0.9