Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16825

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,697,293	+		LRK53_RS16820	0.30	-0.9
3,697,294	-		LRK53_RS16820	0.30	+0.8
3,697,294	-		LRK53_RS16820	0.30	-0.7
3,697,294	-		LRK53_RS16820	0.30	-0.3
3,697,425	+		LRK53_RS16820	0.42	-0.7
3,697,452	+		LRK53_RS16820	0.44	-0.7
3,697,452	+		LRK53_RS16820	0.44	+0.4
3,697,452	+		LRK53_RS16820	0.44	-0.8
3,697,452	+		LRK53_RS16820	0.44	-1.0
3,697,452	+		LRK53_RS16820	0.44	-0.4
3,697,452	+		LRK53_RS16820	0.44	-1.4
3,697,452	+		LRK53_RS16820	0.44	+0.3
3,697,452	+		LRK53_RS16820	0.44	-1.2
3,697,452	+		LRK53_RS16820	0.44	+0.1
3,697,452	+		LRK53_RS16820	0.44	-1.4
3,697,452	+		LRK53_RS16820	0.44	-0.6
3,697,452	+		LRK53_RS16820	0.44	-1.2
3,697,452	+		LRK53_RS16820	0.44	-1.1
3,697,452	+		LRK53_RS16820	0.44	+0.6
3,697,453	-		LRK53_RS16820	0.44	-2.7
3,697,453	-		LRK53_RS16820	0.44	-2.1
3,697,453	-		LRK53_RS16820	0.44	-1.3
3,697,453	-		LRK53_RS16820	0.44	-1.2
3,697,453	-		LRK53_RS16820	0.44	+0.8
3,697,453	-		LRK53_RS16820	0.44	-0.7
3,697,453	-		LRK53_RS16820	0.44	-1.6
3,697,453	-		LRK53_RS16820	0.44	-0.1
3,697,453	-		LRK53_RS16820	0.44	-0.6
3,697,453	-		LRK53_RS16820	0.44	-2.2
3,697,453	-		LRK53_RS16820	0.44	-1.4
3,697,453	-		LRK53_RS16820	0.44	+0.9
3,697,453	-		LRK53_RS16820	0.44	-1.2
3,697,453	-		LRK53_RS16820	0.44	-1.0
3,697,453	-		LRK53_RS16820	0.44	-2.0
3,697,453	-		LRK53_RS16820	0.44	+0.2
3,697,453	-		LRK53_RS16820	0.44	-0.1
3,697,453	-		LRK53_RS16820	0.44	+2.3
3,697,537	-		LRK53_RS16820	0.51	+3.1
3,697,537	-		LRK53_RS16820	0.51	-0.7
3,697,537	-		LRK53_RS16820	0.51	-1.9
3,697,677	+		LRK53_RS16820	0.63	-0.5
3,697,677	+		LRK53_RS16820	0.63	+1.8
3,697,677	+		LRK53_RS16820	0.63	+0.6
3,697,677	+		LRK53_RS16820	0.63	+0.2
3,697,678	-		LRK53_RS16820	0.63	-1.4
3,697,678	-		LRK53_RS16820	0.63	+1.2
3,697,716	+		LRK53_RS16820	0.67	-0.3
3,697,716	+		LRK53_RS16820	0.67	+1.9
3,697,717	-		LRK53_RS16820	0.67	-0.3
3,697,717	-		LRK53_RS16820	0.67	-0.2
3,697,717	-		LRK53_RS16820	0.67	-0.2
3,697,734	+		LRK53_RS16820	0.68	-0.3
3,697,735	-		LRK53_RS16820	0.68	-1.3
3,697,827	+		LRK53_RS16820	0.76	-1.5
3,697,827	+		LRK53_RS16820	0.76	-0.0
3,697,827	+		LRK53_RS16820	0.76	-1.0
3,697,827	+		LRK53_RS16820	0.76	-1.8
3,697,827	+		LRK53_RS16820	0.76	+0.7
3,697,827	+		LRK53_RS16820	0.76	+0.0
3,697,828	-		LRK53_RS16820	0.76	-0.0
3,697,828	-		LRK53_RS16820	0.76	-0.0
3,697,828	-		LRK53_RS16820	0.76	+1.9
3,697,828	-		LRK53_RS16820	0.76	-0.3
3,697,828	-		LRK53_RS16820	0.76	-1.7
3,697,828	-		LRK53_RS16820	0.76	-0.4
3,697,902	+		LRK53_RS16820	0.83	-0.0
3,697,902	+		LRK53_RS16820	0.83	-0.0
3,697,902	+		LRK53_RS16820	0.83	-2.0
3,697,902	+		LRK53_RS16820	0.83	-0.6
3,697,902	+		LRK53_RS16820	0.83	-2.3
3,697,902	+		LRK53_RS16820	0.83	-0.9
3,697,902	+		LRK53_RS16820	0.83	-1.4
3,697,902	+		LRK53_RS16820	0.83	-2.1
3,697,902	+		LRK53_RS16820	0.83	-1.1
3,697,903	-		LRK53_RS16820	0.83	-0.6
3,697,903	-		LRK53_RS16820	0.83	+0.3
3,697,903	-		LRK53_RS16820	0.83	+0.1
3,697,903	-		LRK53_RS16820	0.83	-0.4
3,698,156	+				-1.0
3,698,156	+				-0.5
3,698,156	+				-1.1
3,698,156	+				+0.1
3,698,156	+				-2.0
3,698,156	+				+1.7
3,698,156	+				-0.0
3,698,156	+				-0.3
3,698,156	+				+0.7
3,698,157	-				-0.3
3,698,157	-				-1.3
3,698,157	-				-1.3
3,698,157	-				-1.6
3,698,157	-				+0.2
3,698,274	+				-0.6
3,698,275	-				-1.7
3,698,275	-				-1.0
3,698,455	+		LRK53_RS16825	0.11	-0.7
3,698,479	-		LRK53_RS16825	0.13	-0.3
3,698,479	-		LRK53_RS16825	0.13	-1.0
3,698,644	+		LRK53_RS16825	0.20	-0.0
3,698,644	+		LRK53_RS16825	0.20	+0.2
3,698,644	+		LRK53_RS16825	0.20	-2.0
3,698,644	+		LRK53_RS16825	0.20	-0.3
3,698,644	+		LRK53_RS16825	0.20	-1.1
3,698,644	+		LRK53_RS16825	0.20	+0.0
3,698,644	+		LRK53_RS16825	0.20	-0.9
3,698,644	+		LRK53_RS16825	0.20	-2.0
3,698,644	+		LRK53_RS16825	0.20	-0.1
3,698,645	-		LRK53_RS16825	0.20	-1.8
3,698,645	-		LRK53_RS16825	0.20	-0.6
3,698,645	-		LRK53_RS16825	0.20	-0.3
3,698,836	+		LRK53_RS16825	0.28	-2.4
3,698,836	+		LRK53_RS16825	0.28	-1.4
3,698,836	+		LRK53_RS16825	0.28	+0.1
3,698,836	+		LRK53_RS16825	0.28	+0.6
3,698,836	+		LRK53_RS16825	0.28	-0.5
3,698,836	+		LRK53_RS16825	0.28	-0.6
3,698,836	+		LRK53_RS16825	0.28	-3.6
3,698,836	+		LRK53_RS16825	0.28	+2.0
3,698,836	+		LRK53_RS16825	0.28	-2.6
3,698,836	+		LRK53_RS16825	0.28	-0.0
3,698,836	+		LRK53_RS16825	0.28	-3.0
3,698,836	+		LRK53_RS16825	0.28	-1.2
3,698,836	+		LRK53_RS16825	0.28	-0.1
3,698,836	+		LRK53_RS16825	0.28	-1.9
3,698,836	+		LRK53_RS16825	0.28	-0.6
3,698,836	+		LRK53_RS16825	0.28	+0.3
3,698,836	+		LRK53_RS16825	0.28	-0.9
3,698,836	+		LRK53_RS16825	0.28	-1.3
3,698,836	+		LRK53_RS16825	0.28	+0.5
3,698,836	+		LRK53_RS16825	0.28	-0.9
3,698,836	+		LRK53_RS16825	0.28	-1.8
3,698,836	+		LRK53_RS16825	0.28	+0.6
3,698,836	+		LRK53_RS16825	0.28	+1.5
3,698,837	-		LRK53_RS16825	0.28	+1.5
3,698,837	-		LRK53_RS16825	0.28	+0.3
3,698,837	-		LRK53_RS16825	0.28	+0.3
3,698,837	-		LRK53_RS16825	0.28	-0.2
3,698,837	-		LRK53_RS16825	0.28	-0.2
3,698,837	-		LRK53_RS16825	0.28	-1.5
3,698,837	-		LRK53_RS16825	0.28	+1.1
3,698,837	-		LRK53_RS16825	0.28	-1.0
3,698,837	-		LRK53_RS16825	0.28	-0.3
3,698,837	-		LRK53_RS16825	0.28	+0.1
3,699,392	+		LRK53_RS16825	0.53	+1.7
3,699,393	-		LRK53_RS16825	0.53	-0.8
3,699,393	-		LRK53_RS16825	0.53	-3.7
3,699,586	+		LRK53_RS16825	0.61	-3.0
3,699,586	+		LRK53_RS16825	0.61	-1.1
3,699,586	+		LRK53_RS16825	0.61	-0.2
3,699,586	+		LRK53_RS16825	0.61	+1.2
3,699,586	+		LRK53_RS16825	0.61	-1.5
3,699,586	+		LRK53_RS16825	0.61	-1.7
3,699,586	+		LRK53_RS16825	0.61	-0.2
3,699,586	+		LRK53_RS16825	0.61	+0.6
3,699,586	+		LRK53_RS16825	0.61	-0.7
3,699,586	+		LRK53_RS16825	0.61	+0.1
3,699,586	+		LRK53_RS16825	0.61	-0.4
3,699,586	+		LRK53_RS16825	0.61	-0.4
3,699,587	-		LRK53_RS16825	0.61	+0.8
3,699,587	-		LRK53_RS16825	0.61	-2.8
3,699,587	-		LRK53_RS16825	0.61	+0.3
3,699,587	-		LRK53_RS16825	0.61	-0.0
3,699,587	-		LRK53_RS16825	0.61	-2.2
3,699,587	-		LRK53_RS16825	0.61	+0.7
3,699,587	-		LRK53_RS16825	0.61	-0.2
3,699,587	-		LRK53_RS16825	0.61	-0.6
3,699,587	-		LRK53_RS16825	0.61	-1.4
3,699,587	-		LRK53_RS16825	0.61	-0.2
3,699,587	-		LRK53_RS16825	0.61	-1.4
3,699,587	-		LRK53_RS16825	0.61	-2.2
3,699,587	-		LRK53_RS16825	0.61	+0.1
3,699,587	-		LRK53_RS16825	0.61	-0.3
3,699,587	-		LRK53_RS16825	0.61	-0.4
3,699,587	-		LRK53_RS16825	0.61	-1.5
3,699,587	-		LRK53_RS16825	0.61	-1.1
3,700,246	+				-2.2
3,700,246	+				-1.8
3,700,247	-				-0.5
3,700,358	+				-0.0
3,700,359	-				-1.2
3,700,359	-				-1.5
3,700,626	+		LRK53_RS16830	0.46	-1.0
3,700,626	+		LRK53_RS16830	0.46	+0.6
3,700,626	+		LRK53_RS16830	0.46	-0.6
3,700,626	+		LRK53_RS16830	0.46	-0.2
3,700,626	+		LRK53_RS16830	0.46	+0.1
3,700,626	+		LRK53_RS16830	0.46	-1.5
3,700,626	+		LRK53_RS16830	0.46	-1.1
3,700,626	+		LRK53_RS16830	0.46	+0.9
3,700,626	+		LRK53_RS16830	0.46	-1.2
3,700,627	-		LRK53_RS16830	0.46	-1.0
3,700,627	-		LRK53_RS16830	0.46	-2.0
3,700,627	-		LRK53_RS16830	0.46	-1.7
3,700,627	-		LRK53_RS16830	0.46	-1.0
3,700,627	-		LRK53_RS16830	0.46	-0.8
3,700,627	-		LRK53_RS16830	0.46	-1.4