Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15390

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,361,591	+		LRK53_RS15385	0.52	-0.0
3,361,591	+		LRK53_RS15385	0.52	-0.4
3,361,592	-		LRK53_RS15385	0.52	-1.2
3,361,592	-		LRK53_RS15385	0.52	-1.7
3,361,849	+		LRK53_RS15385	0.65	+0.6
3,361,850	+		LRK53_RS15385	0.65	-0.4
3,361,850	+		LRK53_RS15385	0.65	-1.4
3,361,850	+		LRK53_RS15385	0.65	-0.6
3,361,850	+		LRK53_RS15385	0.65	-1.1
3,361,850	+		LRK53_RS15385	0.65	-1.2
3,361,850	+		LRK53_RS15385	0.65	+0.6
3,361,850	+		LRK53_RS15385	0.65	-1.0
3,361,850	+		LRK53_RS15385	0.65	+0.3
3,361,850	+		LRK53_RS15385	0.65	-0.1
3,361,850	+		LRK53_RS15385	0.65	+0.1
3,361,850	+		LRK53_RS15385	0.65	-2.1
3,361,850	+		LRK53_RS15385	0.65	+0.6
3,361,850	+		LRK53_RS15385	0.65	+0.3
3,361,850	+		LRK53_RS15385	0.65	-0.7
3,361,850	+		LRK53_RS15385	0.65	-2.3
3,361,850	+		LRK53_RS15385	0.65	-2.4
3,361,850	+		LRK53_RS15385	0.65	-0.1
3,361,850	+		LRK53_RS15385	0.65	-2.2
3,361,851	-		LRK53_RS15385	0.65	-1.1
3,361,851	-		LRK53_RS15385	0.65	+1.5
3,361,851	-		LRK53_RS15385	0.65	+2.5
3,361,851	-		LRK53_RS15385	0.65	+0.1
3,361,851	-		LRK53_RS15385	0.65	-1.4
3,361,851	-		LRK53_RS15385	0.65	-0.3
3,361,851	-		LRK53_RS15385	0.65	+0.4
3,361,851	-		LRK53_RS15385	0.65	+1.7
3,361,851	-		LRK53_RS15385	0.65	-1.3
3,361,851	-		LRK53_RS15385	0.65	+0.0
3,361,851	-		LRK53_RS15385	0.65	-0.9
3,361,938	+		LRK53_RS15385	0.70	-1.4
3,361,939	-		LRK53_RS15385	0.70	-2.0
3,361,939	-		LRK53_RS15385	0.70	+0.2
3,361,962	+		LRK53_RS15385	0.71	+2.0
3,361,962	+		LRK53_RS15385	0.71	-1.0
3,361,963	-		LRK53_RS15385	0.71	-0.8
3,361,963	-		LRK53_RS15385	0.71	+0.1
3,361,977	+		LRK53_RS15385	0.72	-1.1
3,361,977	+		LRK53_RS15385	0.72	-1.3
3,361,977	+		LRK53_RS15385	0.72	-0.0
3,361,977	+		LRK53_RS15385	0.72	-0.9
3,361,977	+		LRK53_RS15385	0.72	-0.8
3,361,977	+		LRK53_RS15385	0.72	-2.0
3,361,977	+		LRK53_RS15385	0.72	-1.1
3,361,977	+		LRK53_RS15385	0.72	-2.7
3,361,978	-		LRK53_RS15385	0.72	+0.8
3,361,978	-		LRK53_RS15385	0.72	-0.3
3,361,978	-		LRK53_RS15385	0.72	-2.5
3,361,978	-		LRK53_RS15385	0.72	-0.7
3,362,082	+		LRK53_RS15385	0.77	-1.4
3,362,082	+		LRK53_RS15385	0.77	-0.8
3,362,082	+		LRK53_RS15385	0.77	+0.7
3,362,083	-		LRK53_RS15385	0.77	-0.3
3,362,083	-		LRK53_RS15385	0.77	-0.5
3,362,083	-		LRK53_RS15385	0.77	-1.1
3,362,121	+		LRK53_RS15385	0.79	-1.0
3,362,121	+		LRK53_RS15385	0.79	+0.2
3,362,122	-		LRK53_RS15385	0.79	-0.6
3,362,122	-		LRK53_RS15385	0.79	-0.3
3,362,292	+		LRK53_RS15385	0.88	-1.4
3,362,292	+		LRK53_RS15385	0.88	+0.2
3,362,292	+		LRK53_RS15385	0.88	-0.6
3,362,292	+		LRK53_RS15385	0.88	-1.2
3,362,292	+		LRK53_RS15385	0.88	-1.5
3,362,292	+		LRK53_RS15385	0.88	-0.7
3,362,292	+		LRK53_RS15385	0.88	+0.2
3,362,293	-		LRK53_RS15385	0.88	-1.3
3,362,293	-		LRK53_RS15385	0.88	-2.1
3,362,293	-		LRK53_RS15385	0.88	-0.0
3,362,293	-		LRK53_RS15385	0.88	-2.2
3,362,307	+		LRK53_RS15385	0.89	-0.9
3,362,307	+		LRK53_RS15385	0.89	-0.5
3,362,307	+		LRK53_RS15385	0.89	-0.9
3,362,307	+		LRK53_RS15385	0.89	-1.8
3,362,308	-		LRK53_RS15385	0.89	-0.1
3,362,412	+				-1.4
3,362,412	+				+0.1
3,362,412	+				-0.6
3,362,412	+				-0.1
3,362,413	-				-0.3
3,362,413	-				-1.2
3,362,413	-				+1.1
3,362,493	+				-0.1
3,362,493	+				+0.3
3,362,493	+				-0.1
3,362,494	-				-1.2
3,362,494	-				-1.5
3,362,494	-				-0.3
3,362,605	+				-0.9
3,362,606	-				-0.9
3,362,617	+				-1.4
3,362,617	+				-0.1
3,362,617	+				-0.7
3,362,617	+				+0.7
3,362,617	+				-1.0
3,362,617	+				-0.1
3,362,617	+				+0.5
3,362,617	+				-0.7
3,362,617	+				-1.2
3,362,618	-				-1.6
3,362,618	-				-1.7
3,362,618	-				-2.5
3,362,618	-				-1.9
3,362,618	-				-0.1
3,362,618	-				+1.1
3,362,618	-				+0.7
3,362,618	-				+0.1
3,362,618	-				-1.3
3,362,637	+				-1.7
3,362,637	+				-1.1
3,362,637	+				-0.7
3,362,637	+				-0.6
3,362,637	+				-1.2
3,362,637	+				-1.4
3,362,638	-				-1.1
3,362,638	-				-0.6
3,362,638	-				-0.9
3,362,638	-				-0.9
3,362,638	-				+0.1
3,362,638	-				+0.1
3,362,710	+		LRK53_RS15390	0.15	-1.3
3,362,710	+		LRK53_RS15390	0.15	-0.3
3,362,710	+		LRK53_RS15390	0.15	-0.9
3,362,710	+		LRK53_RS15390	0.15	+2.2
3,362,710	+		LRK53_RS15390	0.15	-0.5
3,362,710	+		LRK53_RS15390	0.15	-0.8
3,362,710	+		LRK53_RS15390	0.15	-0.4
3,362,710	+		LRK53_RS15390	0.15	-1.7
3,362,710	+		LRK53_RS15390	0.15	-1.0
3,362,710	+		LRK53_RS15390	0.15	-1.4
3,362,710	+		LRK53_RS15390	0.15	-0.8
3,362,710	+		LRK53_RS15390	0.15	-0.1
3,362,710	+		LRK53_RS15390	0.15	+0.6
3,362,710	+		LRK53_RS15390	0.15	+0.7
3,362,710	+		LRK53_RS15390	0.15	+0.5
3,362,710	+		LRK53_RS15390	0.15	-0.9
3,362,710	+		LRK53_RS15390	0.15	-2.3
3,362,710	+		LRK53_RS15390	0.15	-1.3
3,362,710	+		LRK53_RS15390	0.15	+0.1
3,362,710	+		LRK53_RS15390	0.15	+0.2
3,362,710	+		LRK53_RS15390	0.15	-0.4
3,362,710	+		LRK53_RS15390	0.15	-0.7
3,362,710	+		LRK53_RS15390	0.15	-1.9
3,362,710	+		LRK53_RS15390	0.15	-0.5
3,362,710	+		LRK53_RS15390	0.15	+0.7
3,362,710	+		LRK53_RS15390	0.15	-0.8
3,362,710	+		LRK53_RS15390	0.15	+1.2
3,362,711	-		LRK53_RS15390	0.15	-0.1
3,362,711	-		LRK53_RS15390	0.15	+0.3
3,362,711	-		LRK53_RS15390	0.15	-1.3
3,362,711	-		LRK53_RS15390	0.15	-0.5
3,362,711	-		LRK53_RS15390	0.15	-0.3
3,362,711	-		LRK53_RS15390	0.15	-0.1
3,362,711	-		LRK53_RS15390	0.15	+0.5
3,362,711	-		LRK53_RS15390	0.15	-0.9
3,362,711	-		LRK53_RS15390	0.15	-1.2
3,362,711	-		LRK53_RS15390	0.15	-1.0
3,362,711	-		LRK53_RS15390	0.15	+0.7
3,362,711	-		LRK53_RS15390	0.15	+1.5
3,362,711	-		LRK53_RS15390	0.15	-2.2
3,362,711	-		LRK53_RS15390	0.15	+0.3
3,362,711	-		LRK53_RS15390	0.15	-1.1
3,362,711	-		LRK53_RS15390	0.15	+0.8
3,362,711	-		LRK53_RS15390	0.15	-0.8
3,362,711	-		LRK53_RS15390	0.15	-1.3
3,362,711	-		LRK53_RS15390	0.15	-0.6
3,362,711	-		LRK53_RS15390	0.15	-0.5
3,362,711	-		LRK53_RS15390	0.15	-0.6
3,363,168	+		LRK53_RS15390	0.54	-1.0
3,363,168	+		LRK53_RS15390	0.54	-0.5
3,363,168	+		LRK53_RS15390	0.54	+0.3
3,363,168	+		LRK53_RS15390	0.54	+0.9
3,363,168	+		LRK53_RS15390	0.54	+0.6
3,363,168	+		LRK53_RS15390	0.54	-1.7
3,363,169	-		LRK53_RS15390	0.54	-0.0
3,363,169	-		LRK53_RS15390	0.54	+0.1
3,363,169	-		LRK53_RS15390	0.54	-0.7
3,363,169	-		LRK53_RS15390	0.54	+2.3
3,363,169	-		LRK53_RS15390	0.54	-1.2
3,363,169	-		LRK53_RS15390	0.54	-1.2
3,363,169	-		LRK53_RS15390	0.54	-1.2
3,363,169	-		LRK53_RS15390	0.54	+0.7
3,363,169	-		LRK53_RS15390	0.54	-0.9
3,363,169	-		LRK53_RS15390	0.54	-1.0
3,363,224	+		LRK53_RS15390	0.58	-0.8
3,363,224	+		LRK53_RS15390	0.58	-1.6
3,363,225	-		LRK53_RS15390	0.58	-0.2
3,363,225	-		LRK53_RS15390	0.58	-0.5
3,363,246	+		LRK53_RS15390	0.60	-1.5
3,363,246	+		LRK53_RS15390	0.60	-0.7
3,363,246	+		LRK53_RS15390	0.60	-2.0
3,363,246	+		LRK53_RS15390	0.60	-0.0
3,363,246	+		LRK53_RS15390	0.60	-0.4
3,363,246	+		LRK53_RS15390	0.60	-1.7
3,363,246	+		LRK53_RS15390	0.60	-0.1
3,363,247	-		LRK53_RS15390	0.60	-1.1
3,363,247	-		LRK53_RS15390	0.60	-0.4
3,363,247	-		LRK53_RS15390	0.60	+0.4
3,363,247	-		LRK53_RS15390	0.60	+0.6
3,363,247	-		LRK53_RS15390	0.60	-1.4
3,363,261	+		LRK53_RS15390	0.61	-0.5
3,363,261	+		LRK53_RS15390	0.61	-1.4
3,363,261	+		LRK53_RS15390	0.61	-1.5
3,363,454	+		LRK53_RS15390	0.78	+1.2
3,363,454	+		LRK53_RS15390	0.78	+0.2
3,363,454	+		LRK53_RS15390	0.78	-1.2
3,363,454	+		LRK53_RS15390	0.78	-1.9
3,363,454	+		LRK53_RS15390	0.78	-2.1
3,363,454	+		LRK53_RS15390	0.78	-0.9
3,363,454	+		LRK53_RS15390	0.78	-0.9
3,363,454	+		LRK53_RS15390	0.78	+0.7
3,363,454	+		LRK53_RS15390	0.78	-1.1
3,363,454	+		LRK53_RS15390	0.78	-1.6
3,363,454	+		LRK53_RS15390	0.78	-0.4
3,363,454	+		LRK53_RS15390	0.78	-0.4
3,363,455	-		LRK53_RS15390	0.78	-1.7
3,363,455	-		LRK53_RS15390	0.78	-1.3
3,363,455	-		LRK53_RS15390	0.78	-0.7
3,363,455	-		LRK53_RS15390	0.78	-0.5
3,363,455	-		LRK53_RS15390	0.78	-1.8
3,363,455	-		LRK53_RS15390	0.78	-1.2
3,363,455	-		LRK53_RS15390	0.78	-0.9
3,363,455	-		LRK53_RS15390	0.78	+0.1
3,363,455	-		LRK53_RS15390	0.78	+0.3
3,363,455	-		LRK53_RS15390	0.78	-1.1
3,363,455	-		LRK53_RS15390	0.78	-0.9
3,363,455	-		LRK53_RS15390	0.78	-1.7
3,363,455	-		LRK53_RS15390	0.78	-0.6
3,363,508	+		LRK53_RS15390	0.82	-1.6
3,363,508	+		LRK53_RS15390	0.82	-0.7
3,363,508	+		LRK53_RS15390	0.82	-3.0
3,363,508	+		LRK53_RS15390	0.82	+1.1
3,363,509	-		LRK53_RS15390	0.82	+0.3
3,363,525	-		LRK53_RS15390	0.83	-0.3
3,363,592	+		LRK53_RS15390	0.89	-0.5
3,363,593	-		LRK53_RS15390	0.89	-0.9
3,363,593	-		LRK53_RS15390	0.89	-2.0
3,363,593	-		LRK53_RS15390	0.89	-1.7
3,363,659	+				-1.3
3,363,659	+				+1.3
3,363,659	+				+0.9
3,363,659	+				-1.1
3,363,659	+				-0.4
3,363,659	+				-0.2
3,363,659	+				-1.8
3,363,659	+				-0.7
3,363,659	+				-3.1
3,363,659	+				-1.0
3,363,659	+				-1.1
3,363,659	+				-1.0
3,363,659	+				-0.8
3,363,659	+				-0.3
3,363,659	+				+0.3
3,363,659	+				+0.1
3,363,659	+				-0.9
3,363,659	+				-0.6
3,363,659	+				+0.5
3,363,659	+				-0.6
3,363,659	+				-1.2
3,363,659	+				-2.0
3,363,659	+				-0.7
3,363,659	+				+1.3
3,363,659	+				-0.6
3,363,659	+				-1.1
3,363,659	+				-1.2
3,363,659	+				-1.0
3,363,659	+				+0.1
3,363,659	+				-1.7
3,363,659	+				-0.3
3,363,659	+				-0.5
3,363,659	+				-2.3
3,363,659	+				+0.6
3,363,659	+				-0.7
3,363,659	+				+0.2
3,363,660	-				-0.4
3,363,660	-				-1.3
3,363,660	-				-0.5
3,363,660	-				+1.1
3,363,660	-				-0.1
3,363,660	-				-1.3
3,363,660	-				-0.9
3,363,660	-				+0.2
3,363,660	-				+0.3
3,363,660	-				-0.6
3,363,660	-				+0.3
3,363,660	-				-0.2
3,363,660	-				+1.3
3,363,660	-				+0.6
3,363,660	-				+0.3
3,363,660	-				+0.5
3,363,660	-				-0.4
3,363,660	-				-0.4
3,363,660	-				-0.2
3,363,660	-				+0.3
3,363,660	-				-0.5
3,363,660	-				-0.3
3,363,660	-				-1.4
3,363,660	-				-0.4
3,363,660	-				-2.5
3,363,660	-				-0.2
3,363,660	-				-0.8
3,363,660	-				-0.7
3,363,660	-				-0.9
3,363,660	-				-0.8
3,363,660	-				+1.2
3,363,660	-				-0.7
3,363,660	-				-1.2
3,363,660	-				-1.0
3,363,660	-				-1.7
3,363,660	-				+0.5
3,363,660	-				-0.3
3,363,660	-				+1.3
3,363,660	-				-1.3
3,363,660	-				-1.4
3,363,660	-				-1.5
3,363,660	-				+0.3
3,363,660	-				+0.9
3,363,863	+				-0.7
3,363,893	+		LRK53_RS15395	0.11	+0.1
3,363,894	-		LRK53_RS15395	0.11	+1.1
3,363,894	-		LRK53_RS15395	0.11	-0.9
3,363,894	-		LRK53_RS15395	0.11	-0.9
3,363,894	-		LRK53_RS15395	0.11	-1.6
3,363,894	-		LRK53_RS15395	0.11	-1.1
3,363,957	+		LRK53_RS15395	0.15	-0.8
3,363,957	+		LRK53_RS15395	0.15	-0.4
3,363,957	+		LRK53_RS15395	0.15	-0.1
3,363,958	-		LRK53_RS15395	0.15	-0.3
3,363,958	-		LRK53_RS15395	0.15	-1.6
3,363,958	-		LRK53_RS15395	0.15	-1.4
3,363,958	-		LRK53_RS15395	0.15	-0.9
3,363,958	-		LRK53_RS15395	0.15	-1.5
3,363,963	+		LRK53_RS15395	0.16	-2.7
3,363,964	-		LRK53_RS15395	0.16	-1.9
3,364,086	+		LRK53_RS15395	0.23	-0.8
3,364,086	+		LRK53_RS15395	0.23	-1.0
3,364,086	+		LRK53_RS15395	0.23	-0.6
3,364,087	-		LRK53_RS15395	0.23	-2.1
3,364,087	-		LRK53_RS15395	0.23	-1.3
3,364,087	-		LRK53_RS15395	0.23	-2.6
3,364,101	+		LRK53_RS15395	0.24	-0.2
3,364,101	+		LRK53_RS15395	0.24	-2.8
3,364,102	-		LRK53_RS15395	0.24	-0.2
3,364,102	-		LRK53_RS15395	0.24	-1.0
3,364,102	-		LRK53_RS15395	0.24	+1.1
3,364,114	+		LRK53_RS15395	0.25	-0.6
3,364,114	+		LRK53_RS15395	0.25	-1.3
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3,364,115	-		LRK53_RS15395	0.25	-0.6
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3,364,140	+		LRK53_RS15395	0.27	+0.3
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