Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14340

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
3,144,051	+		LRK53_RS14330	0.22	-0.2
3,144,051	+		LRK53_RS14330	0.22	-0.4
3,144,051	+		LRK53_RS14330	0.22	-0.6
3,144,051	+		LRK53_RS14330	0.22	-1.0
3,144,051	+		LRK53_RS14330	0.22	-0.6
3,144,051	+		LRK53_RS14330	0.22	-2.5
3,144,051	+		LRK53_RS14330	0.22	-1.4
3,144,051	+		LRK53_RS14330	0.22	-0.2
3,144,051	+		LRK53_RS14330	0.22	-0.1
3,144,051	+		LRK53_RS14330	0.22	-1.5
3,144,051	+		LRK53_RS14330	0.22	-0.0
3,144,051	+		LRK53_RS14330	0.22	-1.7
3,144,051	+		LRK53_RS14330	0.22	+1.6
3,144,051	+		LRK53_RS14330	0.22	-1.4
3,144,051	+		LRK53_RS14330	0.22	-1.4
3,144,051	+		LRK53_RS14330	0.22	-1.4
3,144,051	+		LRK53_RS14330	0.22	+1.1
3,144,051	+		LRK53_RS14330	0.22	+0.1
3,144,051	+		LRK53_RS14330	0.22	-0.4
3,144,051	+		LRK53_RS14330	0.22	-0.8
3,144,052	-		LRK53_RS14330	0.22	-1.5
3,144,052	-		LRK53_RS14330	0.22	-0.6
3,144,052	-		LRK53_RS14330	0.22	+0.4
3,144,052	-		LRK53_RS14330	0.22	-0.8
3,144,052	-		LRK53_RS14330	0.22	-1.1
3,144,052	-		LRK53_RS14330	0.22	+1.0
3,144,052	-		LRK53_RS14330	0.22	-2.2
3,144,052	-		LRK53_RS14330	0.22	-0.7
3,144,052	-		LRK53_RS14330	0.22	-0.9
3,144,052	-		LRK53_RS14330	0.22	+0.5
3,144,052	-		LRK53_RS14330	0.22	+0.8
3,144,052	-		LRK53_RS14330	0.22	-2.2
3,144,052	-		LRK53_RS14330	0.22	-1.2
3,144,052	-		LRK53_RS14330	0.22	-3.3
3,144,144	+		LRK53_RS14330	0.36	+1.0
3,144,144	+		LRK53_RS14330	0.36	-0.0
3,144,144	+		LRK53_RS14330	0.36	+0.0
3,144,144	+		LRK53_RS14330	0.36	-1.4
3,144,144	+		LRK53_RS14330	0.36	+0.0
3,144,145	-		LRK53_RS14330	0.36	-2.4
3,144,145	-		LRK53_RS14330	0.36	-0.9
3,144,145	-		LRK53_RS14330	0.36	-0.2
3,144,186	+		LRK53_RS14330	0.43	-0.7
3,144,186	+		LRK53_RS14330	0.43	-0.6
3,144,186	+		LRK53_RS14330	0.43	-1.3
3,144,186	+		LRK53_RS14330	0.43	-1.2
3,144,186	+		LRK53_RS14330	0.43	+2.4
3,144,186	+		LRK53_RS14330	0.43	-1.9
3,144,186	+		LRK53_RS14330	0.43	+0.9
3,144,186	+		LRK53_RS14330	0.43	-0.3
3,144,186	+		LRK53_RS14330	0.43	+0.7
3,144,187	-		LRK53_RS14330	0.43	-0.7
3,144,187	-		LRK53_RS14330	0.43	-1.1
3,144,187	-		LRK53_RS14330	0.43	-0.5
3,144,187	-		LRK53_RS14330	0.43	-1.6
3,144,187	-		LRK53_RS14330	0.43	+0.1
3,144,187	-		LRK53_RS14330	0.43	+0.9
3,144,187	-		LRK53_RS14330	0.43	-1.2
3,144,187	-		LRK53_RS14330	0.43	-0.8
3,144,187	-		LRK53_RS14330	0.43	-1.5
3,144,187	-		LRK53_RS14330	0.43	-0.9
3,144,187	-		LRK53_RS14330	0.43	-1.1
3,144,187	-		LRK53_RS14330	0.43	+0.7
3,144,187	-		LRK53_RS14330	0.43	-1.1
3,144,187	-		LRK53_RS14330	0.43	-0.4
3,144,187	-		LRK53_RS14330	0.43	+0.1
3,144,187	-		LRK53_RS14330	0.43	-1.3
3,144,187	-		LRK53_RS14330	0.43	+1.8
3,144,187	-		LRK53_RS14330	0.43	+0.7
3,144,187	-		LRK53_RS14330	0.43	-1.8
3,144,267	+		LRK53_RS14330	0.55	-1.0
3,144,267	+		LRK53_RS14330	0.55	+1.3
3,144,267	+		LRK53_RS14330	0.55	-0.3
3,144,267	+		LRK53_RS14330	0.55	+0.9
3,144,268	-		LRK53_RS14330	0.55	-0.2
3,144,268	-		LRK53_RS14330	0.55	+1.4
3,144,268	-		LRK53_RS14330	0.55	-0.0
3,144,268	-		LRK53_RS14330	0.55	+0.2
3,144,268	-		LRK53_RS14330	0.55	+2.0
3,144,268	-		LRK53_RS14330	0.55	-1.0
3,144,268	-		LRK53_RS14330	0.55	+0.7
3,144,268	-		LRK53_RS14330	0.55	-2.1
3,144,268	-		LRK53_RS14330	0.55	-0.2
3,144,268	-		LRK53_RS14330	0.55	-1.1
3,144,418	-		LRK53_RS14330	0.78	-1.1
3,144,624	+		LRK53_RS14335	0.21	-0.6
3,144,630	+		LRK53_RS14335	0.24	-0.4
3,144,630	+		LRK53_RS14335	0.24	-0.2
3,144,630	+		LRK53_RS14335	0.24	-1.7
3,144,630	+		LRK53_RS14335	0.24	-2.2
3,144,630	+		LRK53_RS14335	0.24	+1.1
3,144,630	+		LRK53_RS14335	0.24	-2.0
3,144,630	+		LRK53_RS14335	0.24	+0.2
3,144,630	+		LRK53_RS14335	0.24	+0.3
3,144,630	+		LRK53_RS14335	0.24	+1.0
3,144,630	+		LRK53_RS14335	0.24	-1.3
3,144,630	+		LRK53_RS14335	0.24	+1.3
3,144,631	-		LRK53_RS14335	0.25	-0.9
3,144,631	-		LRK53_RS14335	0.25	-1.3
3,144,631	-		LRK53_RS14335	0.25	-0.2
3,144,631	-		LRK53_RS14335	0.25	-0.2
3,146,032	+				-0.3
3,146,032	+				+0.8
3,146,032	+				+1.0
3,146,032	+				-0.1
3,146,032	+				-0.8
3,146,032	+				-0.7
3,146,032	+				-1.0
3,146,032	+				-1.3
3,146,032	+				-1.7
3,146,033	-				+0.6
3,146,033	-				-2.2
3,146,033	-				-0.8
3,146,033	-				-0.9
3,146,033	-				-0.8
3,146,033	-				-0.5
3,146,093	+				-1.5
3,146,093	+				+2.0
3,146,093	+				-1.2
3,146,093	+				+0.1
3,146,093	+				-0.5
3,146,093	+				+0.4
3,146,093	+				+0.2
3,146,093	+				-1.7
3,146,093	+				+1.4
3,146,094	-				-0.8
3,146,094	-				+0.0
3,146,094	-				+0.8
3,146,094	-				-1.2
3,146,094	-				+1.2
3,146,094	-				-1.2
3,146,094	-				-1.9
3,146,094	-				-0.6
3,146,094	-				-0.6
3,146,224	+		LRK53_RS14345	0.33	+0.7
3,146,360	+		LRK53_RS14345	0.60	-1.2
3,146,360	+		LRK53_RS14345	0.60	-0.4
3,146,360	+		LRK53_RS14345	0.60	-0.4
3,146,360	+		LRK53_RS14345	0.60	-0.4
3,146,360	+		LRK53_RS14345	0.60	+1.1
3,146,360	+		LRK53_RS14345	0.60	-0.8
3,146,361	-		LRK53_RS14345	0.60	-0.1
3,146,361	-		LRK53_RS14345	0.60	-1.8
3,146,361	-		LRK53_RS14345	0.60	-1.0
3,146,361	-		LRK53_RS14345	0.60	-1.2
3,146,361	-		LRK53_RS14345	0.60	-1.5
3,146,361	-		LRK53_RS14345	0.60	-0.2
3,146,614	+		LRK53_RS14350	0.15	-0.4
3,146,630	+		LRK53_RS14350	0.19	-2.6
3,146,631	-		LRK53_RS14350	0.20	+2.0
3,146,631	-		LRK53_RS14350	0.20	+1.6
3,146,631	-		LRK53_RS14350	0.20	-0.7
3,146,631	-		LRK53_RS14350	0.20	-1.2
3,146,631	-		LRK53_RS14350	0.20	-0.2
3,146,658	+		LRK53_RS14350	0.27	-0.2
3,146,658	+		LRK53_RS14350	0.27	-0.1
3,146,658	+		LRK53_RS14350	0.27	-0.6
3,146,658	+		LRK53_RS14350	0.27	+0.5
3,146,659	-		LRK53_RS14350	0.28	-1.4
3,146,659	-		LRK53_RS14350	0.28	-1.5
3,146,659	-		LRK53_RS14350	0.28	-1.9
3,146,821	-		LRK53_RS14350	0.73	+0.1
3,146,901	+				+2.1
3,146,934	-				-0.2
3,146,934	-				-1.1
3,146,934	-				-0.7
3,146,934	-				-0.2
3,146,934	-				-0.6