Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12815

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,832,786	-				-1.8
2,832,786	-				+0.3
2,832,881	+				-0.9
2,833,071	+				-1.0
2,833,071	+				-0.8
2,833,071	+				-0.1
2,833,071	+				+0.5
2,833,071	+				-0.5
2,833,072	-				-0.3
2,833,072	-				+0.1
2,833,072	-				-1.1
2,833,105	+				-0.5
2,833,105	+				-2.0
2,833,105	+				-1.8
2,833,106	-				+2.1
2,833,106	-				-2.5
2,833,106	-				-1.7
2,833,106	-				-1.8
2,833,242	+				-0.7
2,833,242	+				+0.7
2,833,242	+				-0.8
2,833,243	-				-0.3
2,833,269	+				+0.7
2,833,270	-				-1.2
2,833,353	+		LRK53_RS12815	0.11	-0.4
2,833,353	+		LRK53_RS12815	0.11	-0.1
2,833,353	-		LRK53_RS12815	0.11	+0.6
2,833,354	-		LRK53_RS12815	0.11	+0.4
2,833,354	-		LRK53_RS12815	0.11	-1.5
2,833,354	-		LRK53_RS12815	0.11	-0.6
2,833,354	-		LRK53_RS12815	0.11	-0.3
2,833,354	-		LRK53_RS12815	0.11	+0.2
2,833,354	-		LRK53_RS12815	0.11	-1.0
2,833,354	-		LRK53_RS12815	0.11	-0.3
2,833,354	-		LRK53_RS12815	0.11	+0.3
2,833,354	-		LRK53_RS12815	0.11	-0.6
2,833,368	+		LRK53_RS12815	0.12	+0.5
2,833,368	+		LRK53_RS12815	0.12	+0.2
2,833,369	-		LRK53_RS12815	0.12	-1.5
2,833,369	-		LRK53_RS12815	0.12	-0.6
2,833,369	-		LRK53_RS12815	0.12	-1.2
2,833,369	-		LRK53_RS12815	0.12	-2.8
2,833,500	+		LRK53_RS12815	0.21	-3.9
2,833,500	+		LRK53_RS12815	0.21	-1.7
2,833,501	-		LRK53_RS12815	0.21	-0.3
2,833,501	-		LRK53_RS12815	0.21	-1.1
2,833,501	-		LRK53_RS12815	0.21	-0.9
2,833,692	+		LRK53_RS12815	0.33	+0.5
2,833,692	+		LRK53_RS12815	0.33	-0.3
2,833,692	+		LRK53_RS12815	0.33	-0.8
2,833,692	+		LRK53_RS12815	0.33	-1.1
2,833,692	+		LRK53_RS12815	0.33	-0.4
2,833,692	+		LRK53_RS12815	0.33	+0.6
2,833,692	+		LRK53_RS12815	0.33	+0.6
2,833,692	+		LRK53_RS12815	0.33	-0.8
2,833,692	+		LRK53_RS12815	0.33	-1.4
2,833,692	+		LRK53_RS12815	0.33	+1.8
2,833,692	+		LRK53_RS12815	0.33	-2.2
2,833,692	+		LRK53_RS12815	0.33	-1.4
2,833,692	+		LRK53_RS12815	0.33	-0.9
2,833,692	+		LRK53_RS12815	0.33	-1.0
2,833,693	-		LRK53_RS12815	0.33	-0.3
2,833,693	-		LRK53_RS12815	0.33	-0.5
2,833,693	-		LRK53_RS12815	0.33	-0.9
2,833,693	-		LRK53_RS12815	0.33	-1.7
2,833,693	-		LRK53_RS12815	0.33	+1.7
2,833,693	-		LRK53_RS12815	0.33	-0.3
2,833,693	-		LRK53_RS12815	0.33	-1.4
2,833,693	-		LRK53_RS12815	0.33	-1.1
2,833,693	-		LRK53_RS12815	0.33	+1.9
2,833,693	-		LRK53_RS12815	0.33	+2.4
2,833,693	-		LRK53_RS12815	0.33	+0.1
2,833,696	+		LRK53_RS12815	0.33	-0.1
2,833,696	+		LRK53_RS12815	0.33	-1.6
2,833,696	+		LRK53_RS12815	0.33	-0.5
2,833,696	+		LRK53_RS12815	0.33	+0.8
2,833,696	+		LRK53_RS12815	0.33	+0.0
2,833,696	+		LRK53_RS12815	0.33	-0.3
2,833,696	+		LRK53_RS12815	0.33	-0.1
2,833,696	+		LRK53_RS12815	0.33	-0.1
2,833,696	+		LRK53_RS12815	0.33	+1.5
2,833,696	+		LRK53_RS12815	0.33	-2.5
2,833,697	-		LRK53_RS12815	0.33	+2.4
2,833,697	-		LRK53_RS12815	0.33	-1.2
2,833,697	-		LRK53_RS12815	0.33	+0.1
2,833,697	-		LRK53_RS12815	0.33	+0.4
2,833,697	-		LRK53_RS12815	0.33	-0.8
2,833,697	-		LRK53_RS12815	0.33	+0.5
2,833,697	-		LRK53_RS12815	0.33	-2.1
2,833,697	-		LRK53_RS12815	0.33	+1.7
2,833,697	-		LRK53_RS12815	0.33	-3.2
2,833,697	-		LRK53_RS12815	0.33	-1.3
2,833,697	-		LRK53_RS12815	0.33	+0.8
2,833,697	-		LRK53_RS12815	0.33	-1.3
2,833,697	-		LRK53_RS12815	0.33	+0.3
2,833,704	+		LRK53_RS12815	0.34	-2.3
2,833,704	+		LRK53_RS12815	0.34	-0.6
2,833,704	+		LRK53_RS12815	0.34	-0.6
2,833,704	+		LRK53_RS12815	0.34	-0.9
2,833,704	+		LRK53_RS12815	0.34	-0.5
2,833,704	+		LRK53_RS12815	0.34	+0.3
2,833,704	+		LRK53_RS12815	0.34	-1.7
2,833,705	-		LRK53_RS12815	0.34	-0.5
2,833,705	-		LRK53_RS12815	0.34	+2.2
2,833,705	-		LRK53_RS12815	0.34	-1.7
2,833,705	-		LRK53_RS12815	0.34	-1.2
2,833,863	+		LRK53_RS12815	0.44	-3.1
2,833,863	+		LRK53_RS12815	0.44	-0.4
2,833,863	+		LRK53_RS12815	0.44	+0.3
2,833,863	+		LRK53_RS12815	0.44	+0.2
2,833,863	+		LRK53_RS12815	0.44	-0.7
2,833,863	+		LRK53_RS12815	0.44	-0.3
2,833,863	+		LRK53_RS12815	0.44	-0.5
2,833,863	+		LRK53_RS12815	0.44	-1.5
2,833,864	-		LRK53_RS12815	0.44	+1.6
2,833,864	-		LRK53_RS12815	0.44	-0.8
2,833,864	-		LRK53_RS12815	0.44	-1.1
2,833,864	-		LRK53_RS12815	0.44	-0.1
2,833,864	-		LRK53_RS12815	0.44	-1.5
2,833,891	-		LRK53_RS12815	0.46	-2.2
2,834,016	+		LRK53_RS12815	0.54	-0.1
2,834,016	+		LRK53_RS12815	0.54	-1.8
2,834,016	+		LRK53_RS12815	0.54	-1.1
2,834,017	-		LRK53_RS12815	0.54	-2.0
2,834,017	-		LRK53_RS12815	0.54	-2.6
2,834,017	-		LRK53_RS12815	0.54	-0.1
2,834,164	+		LRK53_RS12815	0.63	-1.7
2,834,196	+		LRK53_RS12815	0.65	-0.7
2,834,196	+		LRK53_RS12815	0.65	-1.9
2,834,196	+		LRK53_RS12815	0.65	+1.3
2,834,196	+		LRK53_RS12815	0.65	+2.1
2,834,197	-		LRK53_RS12815	0.66	-0.5
2,834,197	-		LRK53_RS12815	0.66	-0.2
2,834,343	+		LRK53_RS12815	0.75	+0.2
2,834,344	-		LRK53_RS12815	0.75	-0.8
2,834,472	+		LRK53_RS12815	0.83	-0.9
2,834,473	-		LRK53_RS12815	0.83	-1.4
2,834,473	-		LRK53_RS12815	0.83	-0.4
2,834,473	-		LRK53_RS12815	0.83	-0.3
2,834,473	-		LRK53_RS12815	0.83	-1.0
2,834,473	-		LRK53_RS12815	0.83	-0.3
2,834,484	+		LRK53_RS12815	0.84	-0.6
2,834,484	+		LRK53_RS12815	0.84	+0.3
2,834,572	+		LRK53_RS12815	0.90	-0.6
2,834,572	+		LRK53_RS12815	0.90	-0.9
2,834,572	+		LRK53_RS12815	0.90	-1.8
2,834,572	+		LRK53_RS12815	0.90	-1.8
2,834,572	+		LRK53_RS12815	0.90	-0.5
2,834,572	+		LRK53_RS12815	0.90	-0.1
2,834,572	+		LRK53_RS12815	0.90	-0.4
2,834,572	+		LRK53_RS12815	0.90	-0.7
2,834,572	+		LRK53_RS12815	0.90	-0.5
2,834,573	-		LRK53_RS12815	0.90	+0.1
2,834,573	-		LRK53_RS12815	0.90	-1.8
2,834,573	-		LRK53_RS12815	0.90	-0.3
2,834,573	-		LRK53_RS12815	0.90	-1.8
2,834,573	-		LRK53_RS12815	0.90	+0.6
2,834,573	-		LRK53_RS12815	0.90	-1.5
2,834,573	-		LRK53_RS12815	0.90	+1.0
2,834,573	-		LRK53_RS12815	0.90	+0.3
2,834,592	+				-2.0
2,834,592	+				-1.6
2,834,592	+				-0.7
2,834,592	+				-0.4
2,834,640	+				-0.1
2,834,640	+				-1.2
2,834,640	+				+0.3
2,834,640	+				+1.5
2,834,640	+				-1.5
2,834,641	-				-2.3
2,834,641	-				-0.9
2,834,641	-				-0.4
2,834,641	-				-0.5
2,834,641	-				-1.7
2,834,758	+				-1.0
2,834,758	+				-1.4
2,834,758	+				-0.9
2,834,758	+				+0.6
2,834,758	+				-3.4
2,834,758	+				-2.0
2,834,758	+				-1.1
2,834,758	+				-1.5
2,834,758	+				+0.2
2,834,758	+				-1.8
2,834,758	+				+0.6
2,834,759	-				+0.0
2,834,759	-				-1.3
2,834,759	-				-1.1
2,834,759	-				-0.9
2,834,759	-				-0.5
2,834,759	-				-2.3
2,834,759	-				-1.5
2,834,759	-				-0.1
2,834,759	-				+0.1
2,834,759	-				-1.5
2,834,759	-				-1.1
2,834,759	-				-0.1
2,834,759	-				-0.5
2,834,759	-				-2.2
2,834,759	-				+1.6
2,834,761	-				-1.4
2,834,858	+				+0.1
2,834,859	-				-0.1
2,834,883	-				+0.1
2,834,915	+		LRK53_RS12820	0.12	-0.0
2,834,915	+		LRK53_RS12820	0.12	+0.9
2,834,915	+		LRK53_RS12820	0.12	+1.2
2,834,915	+		LRK53_RS12820	0.12	-0.4
2,834,915	+		LRK53_RS12820	0.12	-1.7
2,834,915	+		LRK53_RS12820	0.12	+0.1
2,834,915	+		LRK53_RS12820	0.12	-0.2
2,834,915	+		LRK53_RS12820	0.12	-0.1
2,834,915	+		LRK53_RS12820	0.12	-1.3
2,834,915	+		LRK53_RS12820	0.12	-0.3
2,834,915	+		LRK53_RS12820	0.12	+0.3
2,834,916	-		LRK53_RS12820	0.12	-0.0
2,834,916	-		LRK53_RS12820	0.12	+1.3
2,834,916	-		LRK53_RS12820	0.12	-0.9
2,834,916	-		LRK53_RS12820	0.12	-0.1
2,834,916	-		LRK53_RS12820	0.12	-0.3
2,834,916	-		LRK53_RS12820	0.12	+0.5
2,834,918	+		LRK53_RS12820	0.13	-1.8
2,834,918	+		LRK53_RS12820	0.13	-1.7
2,834,918	+		LRK53_RS12820	0.13	-1.6
2,834,919	-		LRK53_RS12820	0.13	-0.8
2,834,919	-		LRK53_RS12820	0.13	+0.1
2,834,919	-		LRK53_RS12820	0.13	-2.2
2,835,047	+		LRK53_RS12820	0.26	+0.1
2,835,050	+		LRK53_RS12820	0.27	-0.9
2,835,050	+		LRK53_RS12820	0.27	-1.5
2,835,050	+		LRK53_RS12820	0.27	-0.5
2,835,050	+		LRK53_RS12820	0.27	-1.7
2,835,050	+		LRK53_RS12820	0.27	-3.3
2,835,050	+		LRK53_RS12820	0.27	-0.4
2,835,050	+		LRK53_RS12820	0.27	-0.8
2,835,051	-		LRK53_RS12820	0.27	+0.2
2,835,051	-		LRK53_RS12820	0.27	-0.6
2,835,051	-		LRK53_RS12820	0.27	+0.5
2,835,051	-		LRK53_RS12820	0.27	-1.4
2,835,051	-		LRK53_RS12820	0.27	+0.9
2,835,051	-		LRK53_RS12820	0.27	+0.8
2,835,051	-		LRK53_RS12820	0.27	-0.3
2,835,051	-		LRK53_RS12820	0.27	-0.4
2,835,051	-		LRK53_RS12820	0.27	-0.7
2,835,051	-		LRK53_RS12820	0.27	-0.1
2,835,051	-		LRK53_RS12820	0.27	-2.5
2,835,051	-		LRK53_RS12820	0.27	-0.5
2,835,051	-		LRK53_RS12820	0.27	+0.3
2,835,175	-		LRK53_RS12820	0.40	+0.3
2,835,175	-		LRK53_RS12820	0.40	+0.3
2,835,197	+		LRK53_RS12820	0.42	+1.1
2,835,198	-		LRK53_RS12820	0.42	-1.1
2,835,230	+		LRK53_RS12820	0.46	-1.2
2,835,230	+		LRK53_RS12820	0.46	-1.6
2,835,230	+		LRK53_RS12820	0.46	+0.4
2,835,230	+		LRK53_RS12820	0.46	-1.3
2,835,230	+		LRK53_RS12820	0.46	-0.3
2,835,230	+		LRK53_RS12820	0.46	-2.4
2,835,230	+		LRK53_RS12820	0.46	+0.3
2,835,231	-		LRK53_RS12820	0.46	-1.6
2,835,388	+		LRK53_RS12820	0.63	-0.1
2,835,388	+		LRK53_RS12820	0.63	-1.8
2,835,388	+		LRK53_RS12820	0.63	+0.2
2,835,388	+		LRK53_RS12820	0.63	-0.7
2,835,389	-		LRK53_RS12820	0.63	-0.5
2,835,389	-		LRK53_RS12820	0.63	-0.3
2,835,389	-		LRK53_RS12820	0.63	-0.4
2,835,389	-		LRK53_RS12820	0.63	+0.6
2,835,389	-		LRK53_RS12820	0.63	-1.3