Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12665

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,800,812	-		LRK53_RS12655	0.71	-2.3
2,800,812	-		LRK53_RS12655	0.71	+0.6
2,801,200	+				+0.6
2,801,200	+				+0.1
2,801,200	+				+1.1
2,801,200	+				+1.1
2,801,200	+				+1.3
2,801,200	+				-2.1
2,801,200	+				+2.1
2,801,200	+				+0.1
2,801,201	-				-0.2
2,801,201	-				-0.1
2,801,239	+				-1.1
2,801,239	+				-0.1
2,801,239	+				-0.8
2,801,246	+				-1.4
2,801,247	-				-0.6
2,801,247	-				+0.4
2,801,262	+				-0.1
2,801,262	+				-0.2
2,801,262	+				-0.5
2,801,262	+				-0.2
2,801,262	+				+2.1
2,801,262	+				-1.2
2,801,262	+				+0.7
2,801,262	+				+1.7
2,801,263	-				+0.9
2,801,263	-				-2.9
2,801,449	+		LRK53_RS12660	0.33	-2.1
2,801,449	+		LRK53_RS12660	0.33	-2.0
2,801,450	-		LRK53_RS12660	0.33	-2.0
2,801,450	-		LRK53_RS12660	0.33	-0.1
2,801,450	-		LRK53_RS12660	0.33	-0.5
2,801,477	+		LRK53_RS12660	0.38	-0.1
2,801,477	+		LRK53_RS12660	0.38	-1.9
2,801,477	+		LRK53_RS12660	0.38	+1.2
2,801,477	+		LRK53_RS12660	0.38	-0.5
2,801,478	-		LRK53_RS12660	0.38	-2.1
2,801,478	-		LRK53_RS12660	0.38	+0.5
2,801,478	-		LRK53_RS12660	0.38	-1.6
2,801,478	-		LRK53_RS12660	0.38	-1.1
2,801,478	-		LRK53_RS12660	0.38	-0.1
2,801,522	+		LRK53_RS12660	0.47	+0.0
2,801,522	+		LRK53_RS12660	0.47	-1.4
2,801,522	+		LRK53_RS12660	0.47	-0.1
2,801,522	+		LRK53_RS12660	0.47	+0.1
2,801,522	+		LRK53_RS12660	0.47	-1.6
2,801,522	+		LRK53_RS12660	0.47	-1.4
2,801,522	+		LRK53_RS12660	0.47	+1.4
2,801,522	+		LRK53_RS12660	0.47	+0.9
2,801,522	+		LRK53_RS12660	0.47	+0.7
2,801,522	+		LRK53_RS12660	0.47	-0.2
2,801,523	-		LRK53_RS12660	0.47	-1.4
2,801,523	-		LRK53_RS12660	0.47	-1.8
2,801,523	-		LRK53_RS12660	0.47	+0.1
2,801,523	-		LRK53_RS12660	0.47	-1.4
2,801,523	-		LRK53_RS12660	0.47	-1.5
2,801,523	-		LRK53_RS12660	0.47	-2.9
2,801,523	-		LRK53_RS12660	0.47	+0.9
2,801,992	+		LRK53_RS12665	0.12	+0.4
2,801,992	+		LRK53_RS12665	0.12	-2.2
2,802,205	+		LRK53_RS12665	0.27	-0.7
2,802,205	+		LRK53_RS12665	0.27	-0.1
2,802,205	+		LRK53_RS12665	0.27	-1.3
2,802,205	+		LRK53_RS12665	0.27	+0.1
2,802,205	+		LRK53_RS12665	0.27	-0.5
2,802,205	+		LRK53_RS12665	0.27	-0.5
2,802,205	+		LRK53_RS12665	0.27	-1.6
2,802,205	+		LRK53_RS12665	0.27	+0.4
2,802,206	-		LRK53_RS12665	0.27	-3.2
2,802,206	-		LRK53_RS12665	0.27	-0.1
2,802,206	-		LRK53_RS12665	0.27	-0.1
2,802,206	-		LRK53_RS12665	0.27	-3.8
2,802,206	-		LRK53_RS12665	0.27	-1.8
2,802,206	-		LRK53_RS12665	0.27	-0.4
2,802,284	+		LRK53_RS12665	0.32	-1.2
2,802,284	+		LRK53_RS12665	0.32	+0.4
2,802,285	-		LRK53_RS12665	0.32	-1.1
2,802,285	-		LRK53_RS12665	0.32	-0.2
2,802,285	-		LRK53_RS12665	0.32	-0.2
2,802,343	+		LRK53_RS12665	0.36	-2.1
2,802,343	+		LRK53_RS12665	0.36	+0.4
2,802,343	+		LRK53_RS12665	0.36	-0.1
2,802,357	+		LRK53_RS12665	0.37	-2.3
2,802,358	-		LRK53_RS12665	0.37	+0.4
2,802,361	+		LRK53_RS12665	0.37	-0.5
2,802,361	+		LRK53_RS12665	0.37	-1.0
2,802,361	+		LRK53_RS12665	0.37	+0.0
2,802,361	+		LRK53_RS12665	0.37	+0.4
2,802,361	+		LRK53_RS12665	0.37	-1.2
2,802,361	+		LRK53_RS12665	0.37	-0.6
2,802,361	+		LRK53_RS12665	0.37	-0.4
2,802,361	+		LRK53_RS12665	0.37	-0.0
2,802,362	-		LRK53_RS12665	0.37	-1.2
2,802,362	-		LRK53_RS12665	0.37	-1.0
2,802,362	-		LRK53_RS12665	0.37	-0.9
2,802,362	-		LRK53_RS12665	0.37	-1.3
2,802,362	-		LRK53_RS12665	0.37	-0.2
2,802,362	-		LRK53_RS12665	0.37	-2.6
2,802,362	-		LRK53_RS12665	0.37	-2.0
2,802,362	-		LRK53_RS12665	0.37	-3.5
2,802,362	-		LRK53_RS12665	0.37	-0.4
2,802,362	-		LRK53_RS12665	0.37	-2.4
2,802,524	+		LRK53_RS12665	0.48	-1.4
2,802,524	+		LRK53_RS12665	0.48	-0.4
2,802,524	+		LRK53_RS12665	0.48	-0.5
2,802,525	-		LRK53_RS12665	0.48	-2.5
2,802,525	-		LRK53_RS12665	0.48	-1.9
2,802,525	-		LRK53_RS12665	0.48	-1.1
2,802,898	+		LRK53_RS12665	0.74	-1.7
2,802,898	+		LRK53_RS12665	0.74	-0.4
2,802,898	+		LRK53_RS12665	0.74	+0.6
2,802,898	+		LRK53_RS12665	0.74	+0.6
2,802,898	+		LRK53_RS12665	0.74	-0.8
2,802,899	-		LRK53_RS12665	0.74	-1.3
2,802,899	-		LRK53_RS12665	0.74	-1.6
2,802,899	-		LRK53_RS12665	0.74	+0.1
2,802,899	-		LRK53_RS12665	0.74	+0.1
2,802,940	+		LRK53_RS12665	0.76	-2.1
2,802,940	+		LRK53_RS12665	0.76	-0.8
2,802,940	+		LRK53_RS12665	0.76	-0.4
2,802,940	+		LRK53_RS12665	0.76	-2.7
2,802,940	+		LRK53_RS12665	0.76	+0.2
2,802,940	+		LRK53_RS12665	0.76	-1.8
2,802,940	+		LRK53_RS12665	0.76	-1.1
2,802,940	+		LRK53_RS12665	0.76	+0.4
2,802,941	-		LRK53_RS12665	0.76	-0.4
2,802,941	-		LRK53_RS12665	0.76	-0.8
2,802,941	-		LRK53_RS12665	0.76	-1.4
2,802,974	+		LRK53_RS12665	0.79	-0.2
2,802,974	+		LRK53_RS12665	0.79	-1.4
2,802,974	+		LRK53_RS12665	0.79	+2.9
2,802,975	-		LRK53_RS12665	0.79	-3.2
2,802,975	-		LRK53_RS12665	0.79	-0.2
2,803,457	+		LRK53_RS12670	0.15	-0.8
2,803,457	+		LRK53_RS12670	0.15	-3.7
2,803,458	-		LRK53_RS12670	0.15	-0.2
2,803,458	-		LRK53_RS12670	0.15	+0.1
2,803,458	-		LRK53_RS12670	0.15	-0.7
2,803,458	-		LRK53_RS12670	0.15	+0.1
2,803,635	+		LRK53_RS12670	0.30	-1.5
2,803,946	+		LRK53_RS12670	0.56	-1.1
2,803,946	+		LRK53_RS12670	0.56	-1.5
2,803,946	+		LRK53_RS12670	0.56	+0.6
2,803,946	+		LRK53_RS12670	0.56	-1.0
2,803,946	+		LRK53_RS12670	0.56	-0.8
2,803,946	+		LRK53_RS12670	0.56	-1.1
2,803,947	-		LRK53_RS12670	0.56	+0.6
2,803,947	-		LRK53_RS12670	0.56	+0.1
2,803,947	-		LRK53_RS12670	0.56	-1.6
2,803,947	-		LRK53_RS12670	0.56	-2.9
2,803,947	-		LRK53_RS12670	0.56	-0.5
2,803,947	-		LRK53_RS12670	0.56	-0.4
2,803,947	-		LRK53_RS12670	0.56	-0.2
2,803,947	-		LRK53_RS12670	0.56	-0.9
2,803,947	-		LRK53_RS12670	0.56	-0.9
2,803,964	+		LRK53_RS12670	0.57	+0.1
2,803,965	-		LRK53_RS12670	0.57	+0.1
2,804,126	+		LRK53_RS12670	0.70	-0.2
2,804,126	+		LRK53_RS12670	0.70	-1.4
2,804,127	-		LRK53_RS12670	0.71	-1.3
2,804,127	-		LRK53_RS12670	0.71	-1.6
2,804,145	-		LRK53_RS12670	0.72	-0.2