Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09855

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntLRK53_RS09850 and LRK53_RS09855 are separated by 27 nucleotidesLRK53_RS09855 and LRK53_RS09860 are separated by 72 nucleotides LRK53_RS09850: LRK53_RS09850 - peptide chain release factor 2, at 2,212,655 to 2,213,780 _RS09850 LRK53_RS09855: LRK53_RS09855 - hypothetical protein, at 2,213,808 to 2,214,167 _RS09855 LRK53_RS09860: LRK53_RS09860 - lysine--tRNA ligase, at 2,214,240 to 2,215,760 _RS09860 Position (kb) 2213 2214 2215Strain fitness (log2 ratio) -1 0 1at 2213.778 kb on + strandat 2213.778 kb on + strandat 2213.778 kb on + strandat 2214.177 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
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2,213,778 + -1.1
2,213,778 + -1.3
2,213,778 + -0.7
2,214,177 + +0.0

Or see this region's nucleotide sequence