Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09175

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
2,052,491	-		LRK53_RS09170	0.41	+0.0
2,052,604	+		LRK53_RS09170	0.50	+0.1
2,052,605	-		LRK53_RS09170	0.50	-1.1
2,052,605	-		LRK53_RS09170	0.50	+0.3
2,052,605	-		LRK53_RS09170	0.50	+0.1
2,052,760	+		LRK53_RS09170	0.63	-0.3
2,052,761	-		LRK53_RS09170	0.63	-2.1
2,052,802	+		LRK53_RS09170	0.67	-0.0
2,052,850	+		LRK53_RS09170	0.71	-0.7
2,052,850	+		LRK53_RS09170	0.71	-0.5
2,052,851	-		LRK53_RS09170	0.71	+0.8
2,053,210	+				-1.2
2,053,210	+				-0.2
2,053,210	+				-0.8
2,053,210	+				-0.9
2,053,211	-				-2.0
2,053,211	-				-0.8
2,053,661	+		LRK53_RS09175	0.57	+0.5
2,053,661	+		LRK53_RS09175	0.57	-1.9
2,053,661	+		LRK53_RS09175	0.57	-2.9
2,053,661	+		LRK53_RS09175	0.57	-1.0
2,053,661	+		LRK53_RS09175	0.57	-0.4
2,053,661	+		LRK53_RS09175	0.57	-1.6
2,053,661	+		LRK53_RS09175	0.57	-1.5
2,053,661	+		LRK53_RS09175	0.57	-1.2
2,053,661	+		LRK53_RS09175	0.57	+0.3
2,053,661	+		LRK53_RS09175	0.57	-0.8
2,053,661	+		LRK53_RS09175	0.57	-1.2
2,053,661	+		LRK53_RS09175	0.57	-0.6
2,053,661	+		LRK53_RS09175	0.57	-0.5
2,053,661	+		LRK53_RS09175	0.57	+0.2
2,053,661	+		LRK53_RS09175	0.57	-0.7
2,053,661	+		LRK53_RS09175	0.57	-1.1
2,053,661	+		LRK53_RS09175	0.57	-0.8
2,053,661	+		LRK53_RS09175	0.57	-0.7
2,053,661	+		LRK53_RS09175	0.57	+1.4
2,053,661	+		LRK53_RS09175	0.57	-0.7
2,053,661	+		LRK53_RS09175	0.57	-1.1
2,053,661	+		LRK53_RS09175	0.57	-0.6
2,053,661	+		LRK53_RS09175	0.57	-0.2
2,053,661	+		LRK53_RS09175	0.57	-1.2
2,053,661	+		LRK53_RS09175	0.57	+0.3
2,053,661	+		LRK53_RS09175	0.57	-1.7
2,053,661	+		LRK53_RS09175	0.57	+0.0
2,053,661	+		LRK53_RS09175	0.57	-1.3
2,053,661	+		LRK53_RS09175	0.57	-1.0
2,053,661	+		LRK53_RS09175	0.57	-1.1
2,053,661	+		LRK53_RS09175	0.57	-2.1
2,053,661	+		LRK53_RS09175	0.57	-0.1
2,053,661	+		LRK53_RS09175	0.57	-3.1
2,053,661	+		LRK53_RS09175	0.57	+0.5
2,053,661	+		LRK53_RS09175	0.57	-0.3
2,053,661	+		LRK53_RS09175	0.57	+0.0
2,053,661	+		LRK53_RS09175	0.57	-1.6
2,053,661	+		LRK53_RS09175	0.57	-1.0
2,053,661	+		LRK53_RS09175	0.57	-0.9
2,053,662	-		LRK53_RS09175	0.57	-1.1
2,053,662	-		LRK53_RS09175	0.57	-0.0
2,053,662	-		LRK53_RS09175	0.57	-2.1
2,053,662	-		LRK53_RS09175	0.57	-0.3
2,053,662	-		LRK53_RS09175	0.57	-0.9
2,053,662	-		LRK53_RS09175	0.57	+0.0
2,053,662	-		LRK53_RS09175	0.57	+0.3
2,053,662	-		LRK53_RS09175	0.57	+1.1
2,053,662	-		LRK53_RS09175	0.57	+0.2
2,053,662	-		LRK53_RS09175	0.57	-0.8
2,053,662	-		LRK53_RS09175	0.57	-0.3
2,053,662	-		LRK53_RS09175	0.57	-0.1
2,053,662	-		LRK53_RS09175	0.57	-0.6
2,053,662	-		LRK53_RS09175	0.57	-0.9
2,053,662	-		LRK53_RS09175	0.57	-1.5
2,053,662	-		LRK53_RS09175	0.57	-1.3
2,053,662	-		LRK53_RS09175	0.57	-1.8
2,053,662	-		LRK53_RS09175	0.57	-1.1
2,053,662	-		LRK53_RS09175	0.57	-0.7
2,053,662	-		LRK53_RS09175	0.57	-0.6
2,053,662	-		LRK53_RS09175	0.57	+0.6
2,053,662	-		LRK53_RS09175	0.57	-1.5
2,053,662	-		LRK53_RS09175	0.57	-1.5
2,053,662	-		LRK53_RS09175	0.57	-0.3
2,053,662	-		LRK53_RS09175	0.57	+0.8
2,053,662	-		LRK53_RS09175	0.57	-0.1
2,053,662	-		LRK53_RS09175	0.57	-0.4
2,053,662	-		LRK53_RS09175	0.57	+1.3
2,053,662	-		LRK53_RS09175	0.57	-1.8
2,053,662	-		LRK53_RS09175	0.57	-1.3
2,053,662	-		LRK53_RS09175	0.57	-0.4
2,053,662	-		LRK53_RS09175	0.57	-0.6
2,053,712	+		LRK53_RS09175	0.63	+0.3
2,053,712	+		LRK53_RS09175	0.63	-1.9
2,053,712	+		LRK53_RS09175	0.63	-1.0
2,053,712	+		LRK53_RS09175	0.63	-3.3
2,053,712	+		LRK53_RS09175	0.63	-1.2
2,053,712	+		LRK53_RS09175	0.63	+1.8
2,053,712	+		LRK53_RS09175	0.63	+1.4
2,053,712	+		LRK53_RS09175	0.63	-0.6
2,053,712	+		LRK53_RS09175	0.63	+2.0
2,053,712	+		LRK53_RS09175	0.63	+0.7
2,053,712	+		LRK53_RS09175	0.63	-2.5
2,053,712	+		LRK53_RS09175	0.63	-2.1
2,053,712	+		LRK53_RS09175	0.63	-0.8
2,053,712	+		LRK53_RS09175	0.63	-1.1
2,053,712	+		LRK53_RS09175	0.63	-0.2
2,053,712	+		LRK53_RS09175	0.63	-1.6
2,053,712	+		LRK53_RS09175	0.63	-0.4
2,053,712	+		LRK53_RS09175	0.63	+1.0
2,053,712	+		LRK53_RS09175	0.63	+0.0
2,053,713	-		LRK53_RS09175	0.64	+0.4
2,053,713	-		LRK53_RS09175	0.64	-0.6
2,053,713	-		LRK53_RS09175	0.64	-1.4
2,053,713	-		LRK53_RS09175	0.64	-0.7
2,053,713	-		LRK53_RS09175	0.64	-1.5
2,053,713	-		LRK53_RS09175	0.64	-2.1
2,053,713	-		LRK53_RS09175	0.64	+1.1
2,053,713	-		LRK53_RS09175	0.64	-1.1
2,053,713	-		LRK53_RS09175	0.64	-0.6
2,053,713	-		LRK53_RS09175	0.64	+0.0
2,053,832	+		LRK53_RS09175	0.79	+0.4
2,053,832	+		LRK53_RS09175	0.79	-0.8
2,053,833	-		LRK53_RS09175	0.80	-0.4
2,053,833	-		LRK53_RS09175	0.80	-1.3
2,053,833	-		LRK53_RS09175	0.80	-1.2
2,053,833	-		LRK53_RS09175	0.80	-1.5
2,053,904	+		LRK53_RS09175	0.89	-0.6
2,053,904	+		LRK53_RS09175	0.89	+0.2
2,053,905	-		LRK53_RS09175	0.89	-0.6
2,053,905	-		LRK53_RS09175	0.89	-1.1
2,054,021	+				-0.3
2,054,021	+				-2.1
2,054,021	+				-0.7
2,054,021	+				-0.9
2,054,021	+				-0.2
2,054,021	+				-0.8
2,054,021	+				-0.8
2,054,021	+				+0.2
2,054,021	+				-0.7
2,054,021	+				-1.9
2,054,022	-				-0.3
2,054,022	-				-2.2
2,054,022	-				-1.5
2,054,022	-				-0.9
2,054,022	-				-0.3
2,054,022	-				-0.5
2,054,022	-				-1.3
2,054,022	-				+1.8
2,054,022	-				-1.1
2,054,022	-				+2.8
2,054,022	-				-0.6
2,054,022	-				-2.0
2,054,022	-				-0.8
2,054,022	-				-2.6
2,054,022	-				-2.6
2,054,022	-				-1.9
2,054,028	+				-1.2
2,054,028	+				-0.2
2,054,056	+				+0.1
2,054,056	+				+1.1
2,054,056	+				-0.6
2,054,056	+				-1.3
2,054,057	-				+0.3
2,054,057	-				-1.4
2,054,057	-				-0.7
2,054,069	+				-1.8
2,054,069	+				+1.8
2,054,069	+				-0.6
2,054,069	+				-1.8
2,054,070	-				-1.1
2,054,070	-				+0.8
2,054,070	-				+0.3
2,054,070	-				+0.4
2,054,073	+				-2.5
2,054,073	+				-1.4
2,054,073	+				-2.5
2,054,073	+				-3.0
2,054,073	+				-0.9
2,054,073	+				-1.5
2,054,073	+				-0.4
2,054,073	+				+0.2
2,054,073	+				-2.4
2,054,073	+				-0.6
2,054,073	+				-1.7
2,054,073	+				-0.6
2,054,073	+				+0.5
2,054,073	+				-0.7
2,054,073	+				+2.0
2,054,073	+				+0.3
2,054,073	+				-0.9
2,054,073	+				-1.3
2,054,073	+				+0.5
2,054,073	+				-1.0
2,054,073	+				-0.2
2,054,073	+				-0.5
2,054,073	+				-0.2
2,054,073	+				-0.6
2,054,073	+				-0.6
2,054,073	+				-0.6
2,054,073	+				-0.6
2,054,073	+				-0.5
2,054,073	+				-1.5
2,054,073	+				-1.6
2,054,073	+				-2.1
2,054,074	-				-1.4
2,054,074	-				-1.7
2,054,074	-				-1.2
2,054,074	-				-1.0
2,054,074	-				+0.1
2,054,074	-				+1.1
2,054,074	-				-0.3
2,054,074	-				-1.8
2,054,074	-				-1.8
2,054,074	-				+0.0
2,054,074	-				-1.9
2,054,074	-				-0.4
2,054,074	-				-0.5
2,054,074	-				-0.4
2,054,074	-				-0.6
2,054,074	-				-0.3
2,054,085	+				-0.1
2,054,085	+				-0.5
2,054,085	+				-0.8
2,054,085	+				+1.4
2,054,086	-				-0.6
2,054,086	-				-2.0
2,054,086	-				-1.0
2,054,086	-				+0.1
2,054,086	-				-2.9
2,054,086	-				-1.5
2,054,086	-				-1.1
2,054,133	+				-1.4
2,054,133	+				-1.8
2,054,133	+				-1.0
2,054,133	+				+0.3
2,054,133	+				-1.7
2,054,133	+				+0.0
2,054,133	+				-1.0
2,054,133	+				-0.2
2,054,133	+				-1.2
2,054,133	+				-1.6
2,054,133	+				-1.1
2,054,133	+				-0.5
2,054,133	+				-1.5
2,054,133	+				+1.0
2,054,133	+				-0.5
2,054,133	+				-2.7
2,054,133	+				-2.6
2,054,134	-				-0.5
2,054,134	-				-0.5
2,054,134	-				-0.7
2,054,134	-				-2.1
2,054,134	-				-2.4
2,054,134	-				-0.6
2,054,134	-				-1.7
2,054,134	-				-0.2
2,054,134	-				+1.3
2,054,134	-				+0.8
2,054,134	-				+0.9
2,054,134	-				-1.1
2,054,134	-				-2.1
2,054,134	-				+0.0
2,054,134	-				-0.7
2,054,135	+				-1.8
2,054,135	+				+0.0
2,054,135	+				+1.7
2,054,135	+				-1.4
2,054,135	+				+2.6
2,054,135	+				+0.0
2,054,135	+				+0.8
2,054,135	+				-1.2
2,054,135	+				-1.4
2,054,135	+				+0.8
2,054,135	+				-1.1
2,054,135	+				+0.1
2,054,135	+				-2.5
2,054,135	+				-1.4
2,054,135	+				-1.1
2,054,135	+				-1.6
2,054,135	+				-3.4
2,054,135	+				+1.1
2,054,135	+				-2.0
2,054,135	+				-1.2
2,054,135	+				-0.9
2,054,135	+				-0.6
2,054,135	+				-1.2
2,054,135	+				-0.2
2,054,135	+				-0.7
2,054,135	+				+0.5
2,054,135	+				-0.3
2,054,135	+				-2.5
2,054,135	+				-1.6
2,054,135	+				-1.0
2,054,136	-				-3.3
2,054,136	-				-1.5
2,054,136	-				-1.4
2,054,136	-				-0.2
2,054,136	-				-0.7
2,054,136	-				-0.1
2,054,136	-				+1.4
2,054,136	-				-0.7
2,054,136	-				+0.4
2,054,136	-				-3.0
2,054,136	-				-0.6
2,054,136	-				-0.9
2,054,136	-				-2.2
2,054,136	-				-0.3
2,054,136	-				-1.6
2,054,259	+				-0.5
2,054,259	+				-2.7
2,054,260	-				-2.1
2,054,260	-				+0.1
2,054,260	-				-0.5
2,054,364	+		LRK53_RS09180	0.11	-1.4
2,054,364	+		LRK53_RS09180	0.11	+0.4
2,054,365	-		LRK53_RS09180	0.11	+1.1
2,054,365	-		LRK53_RS09180	0.11	-0.3
2,054,365	-		LRK53_RS09180	0.11	-0.3
2,054,635	-		LRK53_RS09180	0.26	+0.0
2,054,635	-		LRK53_RS09180	0.26	+0.0
2,054,967	+		LRK53_RS09180	0.44	-0.5