Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08590

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,924,804	-		LRK53_RS08580	0.27	-0.9
1,925,006	+		LRK53_RS08580	0.73	-0.6
1,925,006	+		LRK53_RS08580	0.73	-0.6
1,925,006	+		LRK53_RS08580	0.73	-1.5
1,925,006	+		LRK53_RS08580	0.73	+0.3
1,925,006	+		LRK53_RS08580	0.73	-0.5
1,925,006	+		LRK53_RS08580	0.73	-1.7
1,925,006	+		LRK53_RS08580	0.73	+0.7
1,925,006	+		LRK53_RS08580	0.73	-1.6
1,925,006	+		LRK53_RS08580	0.73	-3.3
1,925,006	+		LRK53_RS08580	0.73	-0.5
1,925,007	-		LRK53_RS08580	0.73	-0.8
1,925,007	-		LRK53_RS08580	0.73	-0.8
1,925,007	-		LRK53_RS08580	0.73	+0.4
1,925,007	-		LRK53_RS08580	0.73	-1.4
1,925,007	-		LRK53_RS08580	0.73	-1.0
1,925,007	-		LRK53_RS08580	0.73	-1.4
1,925,007	-		LRK53_RS08580	0.73	-2.0
1,925,007	-		LRK53_RS08580	0.73	-1.1
1,925,007	-		LRK53_RS08580	0.73	+0.7
1,925,007	-		LRK53_RS08580	0.73	+0.3
1,925,007	-		LRK53_RS08580	0.73	-1.3
1,925,070	+		LRK53_RS08580	0.87	-0.9
1,925,070	+		LRK53_RS08580	0.87	+0.2
1,925,070	+		LRK53_RS08580	0.87	+0.6
1,925,070	+		LRK53_RS08580	0.87	-0.8
1,925,070	+		LRK53_RS08580	0.87	-0.5
1,925,070	+		LRK53_RS08580	0.87	-2.0
1,925,071	-		LRK53_RS08580	0.88	+1.2
1,925,071	-		LRK53_RS08580	0.88	-2.3
1,925,071	-		LRK53_RS08580	0.88	-0.6
1,925,071	-		LRK53_RS08580	0.88	-0.9
1,925,071	-		LRK53_RS08580	0.88	+0.4
1,925,071	-		LRK53_RS08580	0.88	-0.5
1,925,156	+				+0.4
1,925,171	+		LRK53_RS08585	0.12	-0.5
1,925,171	+		LRK53_RS08585	0.12	-0.8
1,925,172	-		LRK53_RS08585	0.12	-1.3
1,925,172	-		LRK53_RS08585	0.12	+0.2
1,925,172	-		LRK53_RS08585	0.12	-1.6
1,925,174	+		LRK53_RS08585	0.12	-1.1
1,925,174	+		LRK53_RS08585	0.12	-1.8
1,925,174	+		LRK53_RS08585	0.12	-0.6
1,925,174	+		LRK53_RS08585	0.12	-1.3
1,925,175	-		LRK53_RS08585	0.13	-1.4
1,925,175	-		LRK53_RS08585	0.13	+1.1
1,925,175	-		LRK53_RS08585	0.13	-3.0
1,925,252	+		LRK53_RS08585	0.31	-1.0
1,925,252	+		LRK53_RS08585	0.31	-2.2
1,925,252	+		LRK53_RS08585	0.31	-1.9
1,925,253	-		LRK53_RS08585	0.31	-2.1
1,925,253	-		LRK53_RS08585	0.31	+2.0
1,925,253	-		LRK53_RS08585	0.31	+0.8
1,925,253	-		LRK53_RS08585	0.31	-0.8
1,925,253	-		LRK53_RS08585	0.31	-0.7
1,925,253	-		LRK53_RS08585	0.31	-1.9
1,925,261	+		LRK53_RS08585	0.33	-0.5
1,925,261	+		LRK53_RS08585	0.33	-1.6
1,925,262	-		LRK53_RS08585	0.33	+1.9
1,925,262	-		LRK53_RS08585	0.33	-1.0
1,925,264	+		LRK53_RS08585	0.34	+0.0
1,925,265	-		LRK53_RS08585	0.34	-2.3
1,925,265	-		LRK53_RS08585	0.34	-0.0
1,925,287	+		LRK53_RS08585	0.39	-0.9
1,925,287	+		LRK53_RS08585	0.39	-0.5
1,925,287	+		LRK53_RS08585	0.39	-1.4
1,925,287	+		LRK53_RS08585	0.39	+1.1
1,925,287	+		LRK53_RS08585	0.39	-0.2
1,925,287	+		LRK53_RS08585	0.39	+1.2
1,925,288	-		LRK53_RS08585	0.40	-0.2
1,925,288	-		LRK53_RS08585	0.40	-2.2
1,925,288	-		LRK53_RS08585	0.40	-1.6
1,925,288	-		LRK53_RS08585	0.40	-0.4
1,925,297	+		LRK53_RS08585	0.42	-2.5
1,925,297	+		LRK53_RS08585	0.42	-1.4
1,925,297	+		LRK53_RS08585	0.42	+0.1
1,925,297	+		LRK53_RS08585	0.42	-1.8
1,925,297	+		LRK53_RS08585	0.42	-0.5
1,925,297	+		LRK53_RS08585	0.42	+0.2
1,925,297	+		LRK53_RS08585	0.42	-1.8
1,925,298	-		LRK53_RS08585	0.42	-1.8
1,925,298	-		LRK53_RS08585	0.42	+0.5
1,925,298	-		LRK53_RS08585	0.42	-2.0
1,925,298	-		LRK53_RS08585	0.42	+0.2
1,925,298	-		LRK53_RS08585	0.42	-0.8
1,925,298	-		LRK53_RS08585	0.42	-1.3
1,925,298	-		LRK53_RS08585	0.42	-0.5
1,925,298	-		LRK53_RS08585	0.42	-0.7
1,925,298	-		LRK53_RS08585	0.42	+1.4
1,925,298	-		LRK53_RS08585	0.42	-0.8
1,925,477	+		LRK53_RS08585	0.85	+1.7
1,925,477	+		LRK53_RS08585	0.85	-0.4
1,925,477	+		LRK53_RS08585	0.85	-0.0
1,925,477	+		LRK53_RS08585	0.85	-0.4
1,925,478	-		LRK53_RS08585	0.85	-2.9
1,925,478	-		LRK53_RS08585	0.85	-0.9
1,925,576	+				-1.3
1,925,576	+				-0.8
1,925,576	+				-2.0
1,925,576	+				-0.8
1,925,577	-				-1.0
1,925,577	-				-2.3
1,925,577	-				+0.5
1,925,577	-				+1.2
1,925,577	-				-0.6
1,925,688	+				-1.6
1,925,688	+				+0.0
1,925,731	+				-1.2
1,925,731	+				+0.8
1,925,731	+				+1.2
1,925,731	+				-1.5
1,925,731	+				-1.4
1,925,732	-				+0.2
1,925,732	-				+0.1
1,925,732	-				-1.0
1,925,732	-				-2.5
1,925,732	-				-0.2
1,925,732	-				-2.6
1,925,732	-				+0.2
1,925,732	-				-1.7
1,925,732	-				-1.1
1,925,732	-				-0.2
1,925,732	-				-1.1
1,925,732	-				-0.9
1,925,770	+				-0.5
1,925,770	+				+0.7
1,925,770	+				-1.4
1,925,771	-				-0.7
1,925,821	+				+0.8
1,925,821	+				+0.4
1,925,821	+				-2.5
1,925,821	+				-0.6
1,925,821	+				-2.1
1,925,821	+				-1.7
1,925,821	+				-1.5
1,925,821	+				-0.6
1,925,821	+				-1.4
1,925,821	+				-1.4
1,925,821	+				-0.8
1,925,821	+				+0.0
1,925,822	-				-0.2
1,925,822	-				-0.2
1,925,822	-				+0.2
1,925,822	-				-3.1
1,925,822	-				+0.5
1,925,822	-				-0.1
1,925,822	-				+0.1
1,925,822	-				-1.0
1,925,887	+		LRK53_RS08590	0.13	-0.5
1,925,887	+		LRK53_RS08590	0.13	+0.4
1,925,887	+		LRK53_RS08590	0.13	-1.3
1,925,887	+		LRK53_RS08590	0.13	-1.0
1,925,887	+		LRK53_RS08590	0.13	-1.7
1,925,887	+		LRK53_RS08590	0.13	-0.1
1,925,887	+		LRK53_RS08590	0.13	+0.3
1,925,887	+		LRK53_RS08590	0.13	-1.3
1,925,888	-		LRK53_RS08590	0.13	+0.0
1,925,888	-		LRK53_RS08590	0.13	-2.6
1,925,888	-		LRK53_RS08590	0.13	-2.3
1,925,888	-		LRK53_RS08590	0.13	+0.1
1,925,888	-		LRK53_RS08590	0.13	-0.7
1,925,888	-		LRK53_RS08590	0.13	+0.5
1,925,888	-		LRK53_RS08590	0.13	-2.4
1,925,888	-		LRK53_RS08590	0.13	-1.4
1,925,938	+		LRK53_RS08590	0.17	-0.7
1,925,938	+		LRK53_RS08590	0.17	-0.7
1,925,938	+		LRK53_RS08590	0.17	-1.8
1,925,938	+		LRK53_RS08590	0.17	-1.0
1,925,938	+		LRK53_RS08590	0.17	-1.4
1,925,938	+		LRK53_RS08590	0.17	-0.5
1,925,938	+		LRK53_RS08590	0.17	-1.7
1,925,938	+		LRK53_RS08590	0.17	-2.3
1,925,938	+		LRK53_RS08590	0.17	-1.2
1,925,938	+		LRK53_RS08590	0.17	-0.6
1,925,939	-		LRK53_RS08590	0.17	+0.1
1,925,939	-		LRK53_RS08590	0.17	-0.3
1,925,939	-		LRK53_RS08590	0.17	-1.0
1,925,939	-		LRK53_RS08590	0.17	-2.2
1,925,939	-		LRK53_RS08590	0.17	+1.5
1,925,939	-		LRK53_RS08590	0.17	-3.0
1,925,939	-		LRK53_RS08590	0.17	-1.3
1,925,939	-		LRK53_RS08590	0.17	-0.6
1,925,968	+		LRK53_RS08590	0.19	-1.1
1,925,968	+		LRK53_RS08590	0.19	-1.0
1,925,968	+		LRK53_RS08590	0.19	-2.2
1,925,968	+		LRK53_RS08590	0.19	-2.6
1,925,968	+		LRK53_RS08590	0.19	-2.1
1,925,968	+		LRK53_RS08590	0.19	-0.2
1,925,968	+		LRK53_RS08590	0.19	-1.2
1,925,968	+		LRK53_RS08590	0.19	-2.2
1,925,969	-		LRK53_RS08590	0.19	-0.4
1,925,969	-		LRK53_RS08590	0.19	+1.0
1,925,969	-		LRK53_RS08590	0.19	-2.0
1,925,969	-		LRK53_RS08590	0.19	-1.6
1,925,969	-		LRK53_RS08590	0.19	-2.7
1,925,969	-		LRK53_RS08590	0.19	+0.9
1,925,969	-		LRK53_RS08590	0.19	-0.4
1,925,969	-		LRK53_RS08590	0.19	-1.2
1,925,969	-		LRK53_RS08590	0.19	-0.2
1,926,145	+		LRK53_RS08590	0.30	+0.2
1,926,145	+		LRK53_RS08590	0.30	+0.7
1,926,146	-		LRK53_RS08590	0.30	-2.4
1,926,289	+		LRK53_RS08590	0.39	-0.6
1,926,289	+		LRK53_RS08590	0.39	-1.4
1,926,289	+		LRK53_RS08590	0.39	-0.7
1,926,289	+		LRK53_RS08590	0.39	-0.2
1,926,289	+		LRK53_RS08590	0.39	-0.9
1,926,289	+		LRK53_RS08590	0.39	+0.7
1,926,289	+		LRK53_RS08590	0.39	-0.7
1,926,290	-		LRK53_RS08590	0.39	+0.1
1,926,290	-		LRK53_RS08590	0.39	+1.2
1,926,290	-		LRK53_RS08590	0.39	-1.6
1,926,290	-		LRK53_RS08590	0.39	-0.9
1,926,290	-		LRK53_RS08590	0.39	-1.9
1,926,290	-		LRK53_RS08590	0.39	-1.4
1,926,290	-		LRK53_RS08590	0.39	-2.1
1,926,290	-		LRK53_RS08590	0.39	+1.5
1,926,290	-		LRK53_RS08590	0.39	-0.7
1,926,764	-		LRK53_RS08590	0.70	-0.4
1,926,764	-		LRK53_RS08590	0.70	+1.0
1,926,773	+		LRK53_RS08590	0.70	-1.3
1,926,773	+		LRK53_RS08590	0.70	-2.6
1,926,773	+		LRK53_RS08590	0.70	-2.6
1,926,773	+		LRK53_RS08590	0.70	-1.3
1,926,774	-		LRK53_RS08590	0.70	+0.4
1,926,920	-		LRK53_RS08590	0.80	-1.6
1,926,944	+		LRK53_RS08590	0.81	-2.0
1,926,944	+		LRK53_RS08590	0.81	+0.2
1,926,944	+		LRK53_RS08590	0.81	-1.5
1,926,944	+		LRK53_RS08590	0.81	-0.6
1,926,944	+		LRK53_RS08590	0.81	-0.9
1,926,944	+		LRK53_RS08590	0.81	-1.3
1,926,944	+		LRK53_RS08590	0.81	-1.9
1,926,944	+		LRK53_RS08590	0.81	-2.1
1,926,944	+		LRK53_RS08590	0.81	-0.2
1,926,944	+		LRK53_RS08590	0.81	-1.4
1,926,944	+		LRK53_RS08590	0.81	-0.5
1,926,944	+		LRK53_RS08590	0.81	-1.6
1,926,944	+		LRK53_RS08590	0.81	-0.2
1,926,944	+		LRK53_RS08590	0.81	-2.3
1,926,945	-		LRK53_RS08590	0.81	-0.9
1,926,945	-		LRK53_RS08590	0.81	-0.5
1,926,945	-		LRK53_RS08590	0.81	-1.0
1,926,945	-		LRK53_RS08590	0.81	-0.5
1,926,945	-		LRK53_RS08590	0.81	-0.4
1,926,945	-		LRK53_RS08590	0.81	-1.8
1,926,945	-		LRK53_RS08590	0.81	+0.2
1,926,945	-		LRK53_RS08590	0.81	-1.8
1,926,945	-		LRK53_RS08590	0.81	-0.2
1,926,945	-		LRK53_RS08590	0.81	-0.6
1,926,945	-		LRK53_RS08590	0.81	-2.0
1,926,945	-		LRK53_RS08590	0.81	-0.4
1,926,945	-		LRK53_RS08590	0.81	-1.2
1,926,945	-		LRK53_RS08590	0.81	-1.1
1,926,947	+		LRK53_RS08590	0.82	-0.5
1,926,947	+		LRK53_RS08590	0.82	-1.9
1,926,947	+		LRK53_RS08590	0.82	-1.3
1,926,947	+		LRK53_RS08590	0.82	+0.2
1,926,947	+		LRK53_RS08590	0.82	+0.8
1,926,947	+		LRK53_RS08590	0.82	+0.1
1,926,947	+		LRK53_RS08590	0.82	-1.4
1,926,947	+		LRK53_RS08590	0.82	-2.3
1,926,947	+		LRK53_RS08590	0.82	-0.1
1,926,947	+		LRK53_RS08590	0.82	-1.1
1,926,947	+		LRK53_RS08590	0.82	-1.8
1,926,947	+		LRK53_RS08590	0.82	+0.8
1,926,947	+		LRK53_RS08590	0.82	-0.8
1,926,947	+		LRK53_RS08590	0.82	-0.4
1,926,948	-		LRK53_RS08590	0.82	-0.7
1,926,948	-		LRK53_RS08590	0.82	-2.1
1,926,948	-		LRK53_RS08590	0.82	-3.1
1,926,948	-		LRK53_RS08590	0.82	-0.4
1,926,948	-		LRK53_RS08590	0.82	+0.5
1,926,948	-		LRK53_RS08590	0.82	-0.2
1,926,948	-		LRK53_RS08590	0.82	-2.2
1,926,976	+		LRK53_RS08590	0.83	+0.0
1,926,976	+		LRK53_RS08590	0.83	-1.5
1,926,976	+		LRK53_RS08590	0.83	-1.4
1,926,976	+		LRK53_RS08590	0.83	+0.4
1,926,976	+		LRK53_RS08590	0.83	+2.7
1,926,976	+		LRK53_RS08590	0.83	-1.4
1,926,977	-		LRK53_RS08590	0.83	-1.3
1,926,977	-		LRK53_RS08590	0.83	-1.6
1,927,010	+		LRK53_RS08590	0.86	-1.2
1,927,010	+		LRK53_RS08590	0.86	-0.2
1,927,010	+		LRK53_RS08590	0.86	-0.2
1,927,010	+		LRK53_RS08590	0.86	-2.9
1,927,011	-		LRK53_RS08590	0.86	-2.7
1,927,011	-		LRK53_RS08590	0.86	+1.4
1,927,011	-		LRK53_RS08590	0.86	+0.6
1,927,011	-		LRK53_RS08590	0.86	-1.6
1,927,011	-		LRK53_RS08590	0.86	+1.6
1,927,189	+				-0.8
1,927,190	-				-0.9
1,927,190	-				-0.4
1,927,245	-				-0.6
1,927,245	-				-1.5
1,927,245	-				-0.8
1,927,388	+				-1.2
1,927,388	+				-2.2
1,927,388	+				+0.0
1,927,388	+				+0.6
1,927,388	+				-2.5
1,927,595	+		LRK53_RS08595	0.25	+0.4
1,927,595	+		LRK53_RS08595	0.25	+0.8
1,927,596	-		LRK53_RS08595	0.25	-1.2
1,927,673	+		LRK53_RS08595	0.34	-0.2
1,927,673	+		LRK53_RS08595	0.34	-0.4
1,927,674	-		LRK53_RS08595	0.34	-0.2
1,927,730	+		LRK53_RS08595	0.41	+0.5
1,927,730	+		LRK53_RS08595	0.41	+0.2
1,927,731	-		LRK53_RS08595	0.41	-0.9
1,927,731	-		LRK53_RS08595	0.41	-0.6
1,927,731	-		LRK53_RS08595	0.41	-0.2
1,927,967	+		LRK53_RS08595	0.69	-3.0
1,927,967	+		LRK53_RS08595	0.69	-1.4
1,927,967	+		LRK53_RS08595	0.69	-0.4
1,927,967	+		LRK53_RS08595	0.69	+1.2
1,927,967	+		LRK53_RS08595	0.69	+0.1
1,927,968	-		LRK53_RS08595	0.69	-0.2
1,927,968	-		LRK53_RS08595	0.69	-0.4
1,927,968	-		LRK53_RS08595	0.69	+0.2
1,928,027	+		LRK53_RS08595	0.76	-1.9
1,928,028	-		LRK53_RS08595	0.76	-0.4
1,928,028	-		LRK53_RS08595	0.76	-1.6
1,928,028	-		LRK53_RS08595	0.76	+1.2
1,928,028	-		LRK53_RS08595	0.76	+1.7
1,928,051	+		LRK53_RS08595	0.79	-1.6
1,928,051	+		LRK53_RS08595	0.79	+0.4
1,928,052	-		LRK53_RS08595	0.79	-1.0
1,928,096	+		LRK53_RS08595	0.84	-1.3
1,928,097	-		LRK53_RS08595	0.85	-0.6
1,928,132	+		LRK53_RS08595	0.89	-0.5
1,928,156	+				-1.8
1,928,156	+				+0.2
1,928,156	+				-1.5
1,928,157	-				-1.3
1,928,157	-				-1.2
1,928,157	-				-0.2
1,928,157	-				-1.3
1,928,157	-				-1.0
1,928,233	-				+0.2