Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06705

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntLRK53_RS06700 and LRK53_RS06705 are separated by 100 nucleotidesLRK53_RS06705 and LRK53_RS06710 are separated by 315 nucleotides LRK53_RS06700: LRK53_RS06700 - translation elongation factor Ts, at 1,517,804 to 1,518,685 _RS06700 LRK53_RS06705: LRK53_RS06705 - 30S ribosomal protein S2, at 1,518,786 to 1,519,658 _RS06705 LRK53_RS06710: LRK53_RS06710 - type I methionyl aminopeptidase, at 1,519,974 to 1,520,738 _RS06710 Position (kb) 1518 1519 1520Strain fitness (log2 ratio) -2 -1 0 1at 1517.805 kb on + strandat 1517.806 kb on - strandat 1517.806 kb on - strandat 1517.806 kb on - strandat 1517.806 kb on - strandat 1517.806 kb on - strandat 1517.806 kb on - strandat 1517.806 kb on - strandat 1518.698 kb on - strandat 1518.698 kb on - strandat 1518.698 kb on - strandat 1518.698 kb on - strandat 1518.741 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1518.788 kb on - strandat 1519.820 kb on - strandat 1519.820 kb on - strandat 1519.820 kb on - strandat 1519.820 kb on - strandat 1519.820 kb on - strandat 1519.820 kb on - strandat 1519.820 kb on - strandat 1519.820 kb on - strandat 1519.833 kb on - strandat 1519.833 kb on - strandat 1519.833 kb on - strandat 1519.833 kb on - strandat 1519.833 kb on - strandat 1519.833 kb on - strandat 1519.833 kb on - strandat 1519.833 kb on - strandat 1519.960 kb on + strandat 1519.960 kb on + strandat 1519.960 kb on + strandat 1519.960 kb on + strandat 1519.960 kb on + strandat 1519.960 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
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1,517,805 + -0.4
1,517,806 - -2.2
1,517,806 - -0.2
1,517,806 - +0.3
1,517,806 - -0.5
1,517,806 - -0.8
1,517,806 - -0.5
1,517,806 - -0.2
1,518,698 - -0.1
1,518,698 - -0.1
1,518,698 - +0.1
1,518,698 - -1.8
1,518,741 - -0.4
1,518,788 - -1.4
1,518,788 - -1.7
1,518,788 - -1.5
1,518,788 - -0.4
1,518,788 - -2.5
1,518,788 - -2.3
1,518,788 - -1.1
1,518,788 - -1.7
1,518,788 - -1.1
1,518,788 - +0.6
1,519,820 - -0.8
1,519,820 - -0.6
1,519,820 - +0.6
1,519,820 - -0.5
1,519,820 - -0.4
1,519,820 - -0.5
1,519,820 - -2.7
1,519,820 - -0.2
1,519,833 - -0.2
1,519,833 - -1.5
1,519,833 - +0.1
1,519,833 - -1.2
1,519,833 - +0.1
1,519,833 - -0.0
1,519,833 - -0.6
1,519,833 - +0.6
1,519,960 + -0.7
1,519,960 + -2.5
1,519,960 + +0.2
1,519,960 + -0.5
1,519,960 + +0.0
1,519,960 + -0.1

Or see this region's nucleotide sequence