Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS06695 and LRK53_RS06700 are separated by 212 nucleotides LRK53_RS06700 and LRK53_RS06705 are separated by 100 nucleotides
LRK53_RS06695: LRK53_RS06695 - UMP kinase, at 1,516,869 to 1,517,591
_RS06695
LRK53_RS06700: LRK53_RS06700 - translation elongation factor Ts, at 1,517,804 to 1,518,685
_RS06700
LRK53_RS06705: LRK53_RS06705 - 30S ribosomal protein S2, at 1,518,786 to 1,519,658
_RS06705
Position (kb)
1517
1518
1519 Strain fitness (log2 ratio)
-2
-1
0
1 at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.832 kb on - strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.833 kb on + strand at 1516.834 kb on - strand at 1516.834 kb on - strand at 1516.834 kb on - strand at 1516.834 kb on - strand at 1516.834 kb on - strand at 1516.834 kb on - strand at 1516.834 kb on - strand at 1516.834 kb on - strand at 1516.834 kb on - strand at 1517.629 kb on + strand at 1517.630 kb on - strand at 1517.630 kb on - strand at 1517.630 kb on - strand at 1517.805 kb on + strand at 1517.806 kb on - strand at 1517.806 kb on - strand at 1517.806 kb on - strand at 1517.806 kb on - strand at 1517.806 kb on - strand at 1517.806 kb on - strand at 1517.806 kb on - strand at 1518.698 kb on - strand at 1518.698 kb on - strand at 1518.698 kb on - strand at 1518.698 kb on - strand at 1518.741 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand at 1518.788 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM remove 1,516,832 - -0.5 1,516,832 - +0.4 1,516,832 - -1.7 1,516,832 - -0.4 1,516,832 - -0.1 1,516,832 - -1.0 1,516,832 - -0.9 1,516,832 - -1.3 1,516,832 - -0.5 1,516,832 - -0.5 1,516,832 - -0.1 1,516,832 - -0.7 1,516,832 - -0.7 1,516,832 - -0.3 1,516,832 - -0.7 1,516,833 + +0.2 1,516,833 + -0.3 1,516,833 + +0.8 1,516,833 + -0.8 1,516,833 + -0.3 1,516,833 + -1.7 1,516,833 + -1.3 1,516,833 + -0.8 1,516,833 + -0.7 1,516,833 + -0.4 1,516,833 + -1.8 1,516,833 + -0.8 1,516,834 - -1.2 1,516,834 - -2.1 1,516,834 - -0.7 1,516,834 - +0.1 1,516,834 - -0.1 1,516,834 - -0.7 1,516,834 - -0.3 1,516,834 - -2.3 1,516,834 - +0.3 1,517,629 + -0.5 1,517,630 - -0.4 1,517,630 - -0.2 1,517,630 - -1.5 1,517,805 + -0.4 1,517,806 - -2.2 1,517,806 - -0.2 1,517,806 - +0.3 1,517,806 - -0.5 1,517,806 - -0.8 1,517,806 - -0.5 1,517,806 - -0.2 1,518,698 - -0.1 1,518,698 - -0.1 1,518,698 - +0.1 1,518,698 - -1.8 1,518,741 - -0.4 1,518,788 - -1.4 1,518,788 - -1.7 1,518,788 - -1.5 1,518,788 - -0.4 1,518,788 - -2.5 1,518,788 - -2.3 1,518,788 - -1.1 1,518,788 - -1.7 1,518,788 - -1.1 1,518,788 - +0.6
Or see this region's nucleotide sequence