Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04655

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,082,439	+		LRK53_RS04650	0.53	-0.4
1,082,439	+		LRK53_RS04650	0.53	-0.4
1,082,439	+		LRK53_RS04650	0.53	-0.1
1,082,439	+		LRK53_RS04650	0.53	+0.5
1,082,439	+		LRK53_RS04650	0.53	-1.0
1,082,439	+		LRK53_RS04650	0.53	-0.5
1,082,439	+		LRK53_RS04650	0.53	-1.2
1,082,439	+		LRK53_RS04650	0.53	-2.5
1,082,439	+		LRK53_RS04650	0.53	-0.3
1,082,439	+		LRK53_RS04650	0.53	+1.4
1,082,439	+		LRK53_RS04650	0.53	-0.2
1,082,439	+		LRK53_RS04650	0.53	-0.5
1,082,439	+		LRK53_RS04650	0.53	-1.4
1,082,439	+		LRK53_RS04650	0.53	-0.2
1,082,439	+		LRK53_RS04650	0.53	+1.1
1,082,439	+		LRK53_RS04650	0.53	-1.2
1,082,439	+		LRK53_RS04650	0.53	-0.9
1,082,440	-		LRK53_RS04650	0.53	-1.2
1,082,440	-		LRK53_RS04650	0.53	-1.3
1,082,440	-		LRK53_RS04650	0.53	-0.4
1,082,440	-		LRK53_RS04650	0.53	-0.5
1,082,440	-		LRK53_RS04650	0.53	-2.3
1,082,440	-		LRK53_RS04650	0.53	+0.6
1,082,440	-		LRK53_RS04650	0.53	-2.6
1,082,440	-		LRK53_RS04650	0.53	+0.4
1,082,440	-		LRK53_RS04650	0.53	-1.9
1,082,440	-		LRK53_RS04650	0.53	-0.2
1,082,440	-		LRK53_RS04650	0.53	-0.5
1,082,440	-		LRK53_RS04650	0.53	-1.0
1,082,440	-		LRK53_RS04650	0.53	-1.5
1,082,467	-		LRK53_RS04650	0.55	-1.3
1,082,467	-		LRK53_RS04650	0.55	-0.3
1,082,467	-		LRK53_RS04650	0.55	-1.0
1,082,467	-		LRK53_RS04650	0.55	+1.0
1,082,706	+		LRK53_RS04650	0.72	-0.4
1,082,706	+		LRK53_RS04650	0.72	-0.2
1,082,706	+		LRK53_RS04650	0.72	-0.5
1,082,707	-		LRK53_RS04650	0.72	-1.0
1,082,712	+		LRK53_RS04650	0.72	-3.0
1,082,712	+		LRK53_RS04650	0.72	-1.1
1,082,712	+		LRK53_RS04650	0.72	+1.4
1,082,916	+		LRK53_RS04650	0.87	+0.1
1,082,916	+		LRK53_RS04650	0.87	-0.9
1,082,917	-		LRK53_RS04650	0.87	+0.6
1,082,917	-		LRK53_RS04650	0.87	+0.2
1,082,917	-		LRK53_RS04650	0.87	-0.0
1,082,925	-		LRK53_RS04650	0.88	-1.4
1,082,956	+		LRK53_RS04650	0.90	+1.4
1,083,135	+				+0.6
1,083,135	+				-0.7
1,083,135	+				-1.3
1,083,136	-				+1.0
1,083,189	-				-0.9
1,083,242	+				-0.5
1,083,243	-				-1.8
1,083,592	+		LRK53_RS04655	0.33	-0.7
1,083,592	+		LRK53_RS04655	0.33	-0.7
1,083,592	+		LRK53_RS04655	0.33	-1.1
1,083,592	+		LRK53_RS04655	0.33	-3.5
1,083,592	+		LRK53_RS04655	0.33	-1.6
1,083,592	+		LRK53_RS04655	0.33	-3.9
1,083,592	+		LRK53_RS04655	0.33	+0.1
1,083,592	+		LRK53_RS04655	0.33	-2.1
1,083,592	+		LRK53_RS04655	0.33	-1.7
1,083,592	+		LRK53_RS04655	0.33	-1.9
1,083,592	+		LRK53_RS04655	0.33	-4.2
1,083,592	+		LRK53_RS04655	0.33	-0.4
1,083,592	+		LRK53_RS04655	0.33	-0.7
1,083,592	+		LRK53_RS04655	0.33	-0.7
1,083,593	-		LRK53_RS04655	0.34	+0.6
1,083,593	-		LRK53_RS04655	0.34	-0.1
1,083,593	-		LRK53_RS04655	0.34	+0.4
1,083,593	-		LRK53_RS04655	0.34	-2.5
1,083,593	-		LRK53_RS04655	0.34	-3.4
1,083,593	-		LRK53_RS04655	0.34	-2.3
1,083,593	-		LRK53_RS04655	0.34	-0.0
1,083,593	-		LRK53_RS04655	0.34	-1.8
1,083,594	+		LRK53_RS04655	0.34	+0.6
1,083,594	+		LRK53_RS04655	0.34	-4.5
1,083,594	+		LRK53_RS04655	0.34	-0.9
1,083,594	+		LRK53_RS04655	0.34	+0.5
1,083,595	-		LRK53_RS04655	0.34	-1.8
1,083,595	-		LRK53_RS04655	0.34	-1.0
1,083,595	-		LRK53_RS04655	0.34	-0.0
1,083,595	-		LRK53_RS04655	0.34	-2.5
1,083,595	-		LRK53_RS04655	0.34	-1.2
1,083,595	-		LRK53_RS04655	0.34	-0.4
1,083,949	+				-0.5
1,083,950	-				-4.8
1,083,950	-				-2.0
1,083,950	-				-3.3
1,083,950	-				-3.0
1,083,950	-				-2.4
1,084,010	+				-2.0
1,084,010	+				+1.1
1,084,010	+				-0.0
1,084,010	+				-1.6
1,084,010	+				+0.4
1,084,010	+				-2.0
1,084,010	+				+0.4
1,084,010	+				-0.1
1,084,010	+				-1.9
1,084,010	+				-2.2
1,084,010	+				+0.6
1,084,010	+				+0.4
1,084,010	+				+1.4
1,084,010	+				-1.2
1,084,010	+				-1.3
1,084,010	+				+0.1
1,084,010	+				-1.1
1,084,011	-				-1.1
1,084,011	-				-0.0
1,084,011	-				-0.2
1,084,011	-				-0.1
1,084,011	-				-0.7
1,084,011	-				-1.6
1,084,011	-				-1.5
1,084,011	-				-0.3
1,084,011	-				-0.9
1,084,038	+				+0.3
1,084,038	+				+0.4
1,084,038	+				-1.4
1,084,038	+				-0.7
1,084,038	+				-1.9
1,084,038	+				-0.3
1,084,038	+				-1.0
1,084,038	+				-0.6
1,084,038	+				+0.3
1,084,038	+				-1.5
1,084,038	+				+0.5
1,084,038	+				-2.6
1,084,038	+				+0.1
1,084,038	+				-0.5
1,084,038	+				-1.4
1,084,039	-				-2.5
1,084,039	-				+0.1
1,084,039	-				+0.1
1,084,039	-				+1.7
1,084,039	-				+0.3
1,084,039	-				+0.6
1,084,039	-				-1.1
1,084,039	-				-0.1
1,084,047	+				-0.7
1,084,047	+				-1.3
1,084,047	+				-1.0
1,084,047	+				-0.4
1,084,047	+				-1.6
1,084,047	+				+1.0
1,084,047	+				-1.0
1,084,047	+				-0.7
1,084,047	+				-0.5
1,084,047	+				-0.3
1,084,047	+				+0.1
1,084,047	+				+0.1
1,084,047	+				-0.9
1,084,047	+				-0.6
1,084,047	+				-0.5
1,084,047	+				-1.6
1,084,048	-				-1.2
1,084,048	-				-2.6
1,084,048	-				-1.1
1,084,048	-				-1.4
1,084,048	-				-2.0
1,084,048	-				+0.6
1,084,048	-				+0.6
1,084,048	-				-0.0
1,084,048	-				-0.4
1,084,048	-				-0.8
1,084,086	+				+0.3
1,084,086	+				-0.6
1,084,086	+				-1.2
1,084,086	+				-1.5
1,084,086	+				+1.7
1,084,086	+				+1.2
1,084,086	+				+0.1
1,084,086	+				-0.6
1,084,087	-				-1.2
1,084,087	-				+0.6
1,084,087	-				-1.7
1,084,087	-				+0.4
1,084,087	-				-0.6
1,084,087	-				+0.6
1,084,087	-				+0.4
1,084,087	-				-0.5
1,084,218	+				-2.7
1,084,219	-				-1.0
1,084,219	-				-1.6
1,084,219	-				-0.6
1,084,263	+				-0.0
1,084,263	+				-0.0
1,084,263	+				-3.0
1,084,263	+				-0.7
1,084,263	+				+1.3
1,084,263	+				+0.3
1,084,264	-				+1.6
1,084,264	-				-1.9
1,084,264	-				-0.9
1,084,264	-				-1.0
1,084,264	-				-1.3
1,084,264	-				-1.3
1,084,264	-				-1.0
1,084,344	+		LRK53_RS04660	0.10	-2.0
1,084,344	+		LRK53_RS04660	0.10	-1.9
1,084,344	+		LRK53_RS04660	0.10	-1.5
1,084,344	+		LRK53_RS04660	0.10	+0.4
1,084,344	+		LRK53_RS04660	0.10	-1.4
1,084,344	+		LRK53_RS04660	0.10	-1.9
1,084,344	+		LRK53_RS04660	0.10	-0.1
1,084,344	+		LRK53_RS04660	0.10	-0.5
1,084,344	+		LRK53_RS04660	0.10	-2.7
1,084,344	+		LRK53_RS04660	0.10	-1.3
1,084,344	+		LRK53_RS04660	0.10	-0.7
1,084,344	+		LRK53_RS04660	0.10	+0.8
1,084,344	+		LRK53_RS04660	0.10	-0.4
1,084,344	+		LRK53_RS04660	0.10	-2.0
1,084,345	-		LRK53_RS04660	0.11	-1.6
1,084,345	-		LRK53_RS04660	0.11	-2.0
1,084,345	-		LRK53_RS04660	0.11	-0.2
1,084,345	-		LRK53_RS04660	0.11	-1.6
1,084,345	-		LRK53_RS04660	0.11	-1.6
1,084,345	-		LRK53_RS04660	0.11	-2.9
1,084,345	-		LRK53_RS04660	0.11	-0.9
1,084,345	-		LRK53_RS04660	0.11	-0.9
1,084,345	-		LRK53_RS04660	0.11	+1.4
1,084,345	-		LRK53_RS04660	0.11	-1.3
1,084,345	-		LRK53_RS04660	0.11	-1.8
1,084,345	-		LRK53_RS04660	0.11	+0.6
1,084,345	-		LRK53_RS04660	0.11	-2.1
1,084,345	-		LRK53_RS04660	0.11	-1.3
1,084,345	-		LRK53_RS04660	0.11	+0.4
1,084,345	-		LRK53_RS04660	0.11	-1.7
1,084,345	-		LRK53_RS04660	0.11	-3.3
1,084,345	-		LRK53_RS04660	0.11	+0.4
1,084,345	-		LRK53_RS04660	0.11	+0.2
1,084,345	-		LRK53_RS04660	0.11	+1.1
1,084,353	+		LRK53_RS04660	0.11	+0.7
1,084,353	+		LRK53_RS04660	0.11	+2.0
1,084,353	+		LRK53_RS04660	0.11	-0.0
1,084,353	+		LRK53_RS04660	0.11	+0.6
1,084,353	+		LRK53_RS04660	0.11	-1.4
1,084,354	-		LRK53_RS04660	0.11	+0.7
1,084,354	-		LRK53_RS04660	0.11	-0.6
1,084,354	-		LRK53_RS04660	0.11	+1.1
1,084,354	-		LRK53_RS04660	0.11	+0.7
1,084,354	-		LRK53_RS04660	0.11	-2.0
1,084,354	-		LRK53_RS04660	0.11	+0.1
1,084,354	-		LRK53_RS04660	0.11	-2.2
1,084,354	-		LRK53_RS04660	0.11	+0.1
1,084,354	-		LRK53_RS04660	0.11	-0.0
1,084,354	-		LRK53_RS04660	0.11	-1.5
1,084,354	-		LRK53_RS04660	0.11	-0.2
1,084,356	+		LRK53_RS04660	0.11	-2.0
1,084,356	+		LRK53_RS04660	0.11	-0.5
1,084,356	+		LRK53_RS04660	0.11	-0.6
1,084,356	+		LRK53_RS04660	0.11	-0.5
1,084,356	+		LRK53_RS04660	0.11	+0.1
1,084,356	+		LRK53_RS04660	0.11	-2.9
1,084,356	+		LRK53_RS04660	0.11	-1.7
1,084,356	+		LRK53_RS04660	0.11	-1.5
1,084,357	-		LRK53_RS04660	0.11	-0.7
1,084,357	-		LRK53_RS04660	0.11	-1.2
1,084,357	-		LRK53_RS04660	0.11	-0.4
1,084,357	-		LRK53_RS04660	0.11	-3.2
1,084,357	-		LRK53_RS04660	0.11	-1.5
1,084,357	-		LRK53_RS04660	0.11	+0.4
1,084,357	-		LRK53_RS04660	0.11	+0.6
1,084,357	-		LRK53_RS04660	0.11	+0.3
1,084,357	-		LRK53_RS04660	0.11	-0.5
1,084,357	-		LRK53_RS04660	0.11	-0.1
1,084,403	-		LRK53_RS04660	0.12	+0.6
1,084,403	-		LRK53_RS04660	0.12	-0.4
1,084,403	-		LRK53_RS04660	0.12	-0.8
1,084,403	-		LRK53_RS04660	0.12	-0.9
1,084,403	-		LRK53_RS04660	0.12	+0.1
1,084,456	+		LRK53_RS04660	0.14	+1.1
1,084,456	+		LRK53_RS04660	0.14	-0.0
1,084,456	+		LRK53_RS04660	0.14	-0.5
1,084,456	+		LRK53_RS04660	0.14	-0.4
1,084,457	-		LRK53_RS04660	0.14	+0.0
1,084,457	-		LRK53_RS04660	0.14	-0.8
1,084,457	-		LRK53_RS04660	0.14	-0.6
1,084,629	+		LRK53_RS04660	0.20	+0.4
1,084,629	+		LRK53_RS04660	0.20	+1.2
1,084,629	+		LRK53_RS04660	0.20	+1.0
1,084,629	+		LRK53_RS04660	0.20	-0.8
1,084,629	+		LRK53_RS04660	0.20	+0.2
1,084,630	-		LRK53_RS04660	0.20	-1.1
1,084,630	-		LRK53_RS04660	0.20	-1.7
1,084,630	-		LRK53_RS04660	0.20	-2.5
1,084,630	-		LRK53_RS04660	0.20	-0.7
1,084,630	-		LRK53_RS04660	0.20	-1.7
1,084,630	-		LRK53_RS04660	0.20	-0.9
1,084,630	-		LRK53_RS04660	0.20	+0.5
1,084,630	-		LRK53_RS04660	0.20	-1.0
1,084,630	-		LRK53_RS04660	0.20	-1.5
1,084,630	-		LRK53_RS04660	0.20	-1.0
1,084,644	+		LRK53_RS04660	0.21	-0.6
1,084,644	+		LRK53_RS04660	0.21	+0.4
1,084,644	+		LRK53_RS04660	0.21	-0.2
1,084,644	+		LRK53_RS04660	0.21	-0.7
1,084,644	+		LRK53_RS04660	0.21	-0.6
1,084,644	+		LRK53_RS04660	0.21	-1.6
1,084,645	-		LRK53_RS04660	0.21	-0.2
1,084,645	-		LRK53_RS04660	0.21	-0.4
1,084,645	-		LRK53_RS04660	0.21	-1.5
1,084,645	-		LRK53_RS04660	0.21	-0.1
1,084,645	-		LRK53_RS04660	0.21	-1.2
1,084,645	-		LRK53_RS04660	0.21	+0.2
1,084,645	-		LRK53_RS04660	0.21	-0.8
1,084,645	-		LRK53_RS04660	0.21	-0.6
1,084,645	-		LRK53_RS04660	0.21	-2.3
1,084,645	-		LRK53_RS04660	0.21	-0.7
1,084,645	-		LRK53_RS04660	0.21	-1.7
1,084,665	+		LRK53_RS04660	0.21	-0.8
1,084,665	+		LRK53_RS04660	0.21	+0.4
1,084,665	+		LRK53_RS04660	0.21	+0.9
1,084,665	+		LRK53_RS04660	0.21	+0.8
1,084,665	+		LRK53_RS04660	0.21	-0.2
1,084,665	+		LRK53_RS04660	0.21	+0.4
1,084,665	+		LRK53_RS04660	0.21	-0.4
1,084,665	+		LRK53_RS04660	0.21	-0.7
1,084,665	+		LRK53_RS04660	0.21	-1.9
1,084,665	+		LRK53_RS04660	0.21	-1.6
1,084,665	+		LRK53_RS04660	0.21	-0.1
1,084,665	+		LRK53_RS04660	0.21	-0.4
1,084,665	+		LRK53_RS04660	0.21	-0.2
1,084,665	-		LRK53_RS04660	0.21	+0.4
1,084,666	-		LRK53_RS04660	0.21	+0.8
1,084,666	-		LRK53_RS04660	0.21	-1.0
1,084,666	-		LRK53_RS04660	0.21	-1.4
1,084,666	-		LRK53_RS04660	0.21	-0.6
1,084,666	-		LRK53_RS04660	0.21	-3.0
1,084,666	-		LRK53_RS04660	0.21	-0.7
1,084,666	-		LRK53_RS04660	0.21	-0.4
1,084,666	-		LRK53_RS04660	0.21	-0.6
1,084,666	-		LRK53_RS04660	0.21	+0.5
1,084,666	-		LRK53_RS04660	0.21	+0.6
1,084,666	-		LRK53_RS04660	0.21	-2.2
1,084,666	-		LRK53_RS04660	0.21	-2.4
1,084,666	-		LRK53_RS04660	0.21	+0.2
1,084,671	+		LRK53_RS04660	0.22	+0.8
1,084,671	+		LRK53_RS04660	0.22	+0.6
1,084,671	+		LRK53_RS04660	0.22	-0.4
1,084,671	+		LRK53_RS04660	0.22	-1.5
1,084,671	+		LRK53_RS04660	0.22	-0.5
1,084,671	+		LRK53_RS04660	0.22	+1.4
1,084,671	+		LRK53_RS04660	0.22	-0.1
1,084,671	+		LRK53_RS04660	0.22	-0.6
1,084,671	+		LRK53_RS04660	0.22	-0.5
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