Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04535

Experiment: planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
1,053,951	+		LRK53_RS04530	0.65	-1.6
1,053,951	+		LRK53_RS04530	0.65	+0.3
1,053,951	+		LRK53_RS04530	0.65	-1.2
1,053,951	+		LRK53_RS04530	0.65	-1.1
1,054,145	+		LRK53_RS04530	0.77	-2.7
1,054,145	+		LRK53_RS04530	0.77	-0.7
1,054,146	-		LRK53_RS04530	0.78	+0.2
1,054,146	-		LRK53_RS04530	0.78	-1.1
1,054,146	-		LRK53_RS04530	0.78	-0.2
1,054,197	+		LRK53_RS04530	0.81	-0.3
1,054,197	+		LRK53_RS04530	0.81	-0.8
1,054,197	+		LRK53_RS04530	0.81	+0.1
1,054,197	+		LRK53_RS04530	0.81	-0.3
1,054,198	-		LRK53_RS04530	0.81	-1.1
1,054,198	-		LRK53_RS04530	0.81	-0.0
1,054,221	+		LRK53_RS04530	0.82	+1.7
1,054,221	+		LRK53_RS04530	0.82	-0.2
1,054,221	+		LRK53_RS04530	0.82	-0.6
1,054,221	+		LRK53_RS04530	0.82	-1.7
1,054,221	+		LRK53_RS04530	0.82	-1.4
1,054,221	+		LRK53_RS04530	0.82	-0.6
1,054,221	+		LRK53_RS04530	0.82	-1.4
1,054,221	+		LRK53_RS04530	0.82	-0.8
1,054,221	+		LRK53_RS04530	0.82	-2.9
1,054,221	+		LRK53_RS04530	0.82	+1.2
1,054,222	-		LRK53_RS04530	0.82	-1.7
1,054,222	-		LRK53_RS04530	0.82	-0.8
1,054,222	-		LRK53_RS04530	0.82	+0.2
1,054,222	-		LRK53_RS04530	0.82	-2.6
1,054,222	-		LRK53_RS04530	0.82	-1.2
1,054,222	-		LRK53_RS04530	0.82	+0.9
1,054,222	-		LRK53_RS04530	0.82	-0.3
1,054,222	-		LRK53_RS04530	0.82	+0.2
1,054,222	-		LRK53_RS04530	0.82	-0.3
1,054,222	-		LRK53_RS04530	0.82	+0.6
1,054,222	-		LRK53_RS04530	0.82	-0.4
1,054,222	-		LRK53_RS04530	0.82	+1.7
1,054,222	-		LRK53_RS04530	0.82	+0.8
1,054,317	+		LRK53_RS04530	0.88	-0.3
1,054,317	+		LRK53_RS04530	0.88	-2.1
1,054,317	+		LRK53_RS04530	0.88	-1.2
1,054,317	+		LRK53_RS04530	0.88	+0.2
1,054,318	-		LRK53_RS04530	0.88	-2.0
1,054,318	-		LRK53_RS04530	0.88	-1.5
1,054,435	+				+1.6
1,054,435	+				-3.0
1,054,435	+				-1.5
1,054,436	-				+0.3
1,054,436	-				-1.3
1,054,440	-				+0.1
1,054,440	-				-0.2
1,054,488	+				-1.0
1,054,488	+				+1.5
1,054,488	+				-1.4
1,054,488	+				-0.0
1,054,488	+				-1.0
1,054,488	+				-0.6
1,054,488	+				-0.3
1,054,488	+				+1.3
1,054,488	+				+3.0
1,054,488	+				-0.7
1,054,489	-				+1.7
1,054,489	-				-0.8
1,054,489	-				+0.1
1,054,489	-				+2.0
1,054,489	-				-1.1
1,054,489	-				-3.3
1,054,489	-				-1.7
1,054,489	-				-0.3
1,054,542	+				-1.5
1,054,542	+				+0.0
1,054,543	-				-3.0
1,054,543	-				-1.1
1,054,658	+				+0.2
1,054,658	+				-0.1
1,054,658	+				+1.1
1,054,658	+				-0.6
1,054,658	+				-0.2
1,054,658	+				-1.4
1,054,658	+				-0.9
1,054,658	+				+0.2
1,054,658	+				-0.9
1,054,658	+				-0.7
1,054,658	+				-1.6
1,054,658	+				-0.6
1,054,658	+				+0.0
1,054,658	+				-0.9
1,054,658	+				-0.2
1,054,658	+				+2.1
1,054,658	+				-0.6
1,054,658	+				-1.1
1,054,659	-				-0.3
1,054,659	-				-0.0
1,054,659	-				-1.0
1,054,659	-				-0.0
1,054,659	-				-1.2
1,054,659	-				-0.8
1,054,659	-				+0.2
1,054,659	-				-2.0
1,054,659	-				-2.4
1,054,659	-				-1.3
1,054,659	-				-0.9
1,054,659	-				+0.7
1,054,659	-				-0.7
1,054,659	-				-1.3
1,054,661	+				-1.1
1,054,661	+				-1.5
1,054,661	+				-2.3
1,054,661	+				+0.7
1,054,661	+				-1.5
1,054,661	+				-1.4
1,054,661	+				-0.7
1,054,661	+				-2.1
1,054,661	+				-0.5
1,054,661	+				-0.8
1,054,661	+				+1.4
1,054,661	+				-0.2
1,054,661	+				-0.7
1,054,661	+				-2.1
1,054,661	+				-1.8
1,054,661	+				-0.8
1,054,661	+				+1.0
1,054,661	+				-0.1
1,054,661	+				-0.3
1,054,662	-				+0.3
1,054,662	-				-0.2
1,054,662	-				-0.3
1,054,662	-				-1.6
1,054,662	-				-0.3
1,054,662	-				+1.3
1,054,662	-				-0.8
1,054,662	-				-0.5
1,054,662	-				-0.3
1,054,727	+				-2.2
1,054,727	+				-0.3
1,054,727	+				+0.4
1,054,728	-				-0.6
1,054,820	+		LRK53_RS04535	0.14	-0.3
1,054,820	+		LRK53_RS04535	0.14	-1.1
1,054,820	+		LRK53_RS04535	0.14	+1.1
1,054,820	+		LRK53_RS04535	0.14	-0.4
1,054,820	+		LRK53_RS04535	0.14	-0.3
1,054,820	+		LRK53_RS04535	0.14	-1.9
1,054,820	+		LRK53_RS04535	0.14	-0.5
1,054,820	+		LRK53_RS04535	0.14	+0.8
1,054,820	+		LRK53_RS04535	0.14	+2.0
1,054,821	-		LRK53_RS04535	0.14	+0.7
1,054,821	-		LRK53_RS04535	0.14	-2.7
1,054,821	-		LRK53_RS04535	0.14	-1.6
1,054,821	-		LRK53_RS04535	0.14	-0.6
1,055,252	+		LRK53_RS04535	0.49	-0.6
1,055,252	+		LRK53_RS04535	0.49	-0.7
1,055,252	+		LRK53_RS04535	0.49	-1.6
1,055,252	+		LRK53_RS04535	0.49	+1.2
1,055,252	+		LRK53_RS04535	0.49	-0.7
1,055,252	+		LRK53_RS04535	0.49	-2.7
1,055,252	+		LRK53_RS04535	0.49	-1.5
1,055,252	+		LRK53_RS04535	0.49	-1.7
1,055,252	+		LRK53_RS04535	0.49	-0.6
1,055,252	+		LRK53_RS04535	0.49	-0.9
1,055,252	+		LRK53_RS04535	0.49	+0.2
1,055,252	+		LRK53_RS04535	0.49	+1.1
1,055,253	-		LRK53_RS04535	0.49	-0.9
1,055,253	-		LRK53_RS04535	0.49	-1.0
1,055,253	-		LRK53_RS04535	0.49	-1.1
1,055,253	-		LRK53_RS04535	0.49	-0.9
1,055,253	-		LRK53_RS04535	0.49	-0.9
1,055,253	-		LRK53_RS04535	0.49	-0.9
1,055,253	-		LRK53_RS04535	0.49	-1.4
1,055,253	-		LRK53_RS04535	0.49	-1.1
1,055,253	-		LRK53_RS04535	0.49	-0.7
1,055,253	-		LRK53_RS04535	0.49	+1.7
1,055,300	+		LRK53_RS04535	0.53	+0.8
1,055,301	-		LRK53_RS04535	0.53	-2.8
1,055,301	-		LRK53_RS04535	0.53	-0.1
1,055,318	+		LRK53_RS04535	0.54	-1.9
1,055,318	+		LRK53_RS04535	0.54	+0.2
1,055,318	+		LRK53_RS04535	0.54	+0.5
1,055,319	-		LRK53_RS04535	0.54	-1.0
1,055,319	-		LRK53_RS04535	0.54	-0.5
1,055,319	-		LRK53_RS04535	0.54	-1.5
1,055,319	-		LRK53_RS04535	0.54	-1.3
1,055,363	+		LRK53_RS04535	0.58	-0.0
1,055,363	+		LRK53_RS04535	0.58	-1.1
1,055,363	+		LRK53_RS04535	0.58	-0.2
1,055,363	+		LRK53_RS04535	0.58	-0.2
1,055,363	+		LRK53_RS04535	0.58	-1.5
1,055,363	+		LRK53_RS04535	0.58	+1.1
1,055,364	-		LRK53_RS04535	0.58	-1.2
1,055,364	-		LRK53_RS04535	0.58	+1.0
1,055,364	-		LRK53_RS04535	0.58	-2.2
1,055,364	-		LRK53_RS04535	0.58	-0.5
1,055,364	-		LRK53_RS04535	0.58	-2.0
1,055,541	-		LRK53_RS04535	0.72	-1.1
1,055,624	+		LRK53_RS04535	0.79	-0.5
1,055,624	+		LRK53_RS04535	0.79	+0.4
1,055,624	+		LRK53_RS04535	0.79	-0.3
1,055,624	+		LRK53_RS04535	0.79	-0.0
1,055,625	-		LRK53_RS04535	0.79	-0.1
1,055,625	-		LRK53_RS04535	0.79	-0.6
1,055,625	-		LRK53_RS04535	0.79	-3.0
1,055,625	-		LRK53_RS04535	0.79	-1.1
1,055,625	-		LRK53_RS04535	0.79	-1.3
1,055,651	+		LRK53_RS04535	0.81	-0.5
1,055,651	+		LRK53_RS04535	0.81	-1.3
1,055,652	-		LRK53_RS04535	0.81	-1.7
1,055,652	-		LRK53_RS04535	0.81	-0.2
1,055,652	-		LRK53_RS04535	0.81	-1.1
1,055,652	-		LRK53_RS04535	0.81	-1.1
1,055,652	-		LRK53_RS04535	0.81	-0.0
1,055,652	-		LRK53_RS04535	0.81	-1.9
1,055,652	-		LRK53_RS04535	0.81	-0.2
1,055,652	-		LRK53_RS04535	0.81	-0.5
1,055,863	+				+0.7
1,055,864	-				-1.5
1,055,864	-				-2.4
1,055,949	+				+1.6
1,055,949	+				-1.0
1,055,949	+				-0.2
1,055,949	+				+1.0
1,055,949	+				-0.7
1,055,949	+				+0.1
1,055,949	+				+1.1
1,055,949	+				-1.0
1,055,949	+				-1.1
1,055,949	+				-0.5
1,055,949	+				+0.7
1,055,949	+				-0.4
1,055,949	+				-0.4
1,055,949	+				+0.2
1,055,949	+				+0.4
1,055,949	+				-1.9
1,055,949	+				-0.2
1,055,949	+				-0.3
1,055,949	+				-0.9
1,055,949	+				-0.6
1,055,950	-				+0.2
1,055,950	-				-1.8
1,055,950	-				-0.6
1,055,950	-				+0.2
1,055,950	-				-2.9
1,055,950	-				-0.0
1,055,950	-				-0.8
1,055,950	-				-1.8
1,055,950	-				+0.3
1,055,950	-				+0.3
1,055,950	-				-0.0
1,055,950	-				+0.8
1,055,950	-				+0.9
1,055,950	-				-0.3
1,055,950	-				+1.7
1,055,950	-				+0.8
1,055,950	-				-0.8
1,056,198	+		LRK53_RS04540	0.61	+0.7
1,056,199	-		LRK53_RS04540	0.61	-0.6
1,056,199	-		LRK53_RS04540	0.61	-2.0
1,056,199	-		LRK53_RS04540	0.61	-1.9
1,056,318	+		LRK53_RS04540	0.89	-0.5
1,056,318	+		LRK53_RS04540	0.89	-2.4
1,056,318	+		LRK53_RS04540	0.89	-0.4
1,056,318	+		LRK53_RS04540	0.89	-1.8
1,056,319	-		LRK53_RS04540	0.89	-1.0
1,056,319	-		LRK53_RS04540	0.89	-1.3
1,056,319	-		LRK53_RS04540	0.89	+1.5
1,056,319	-		LRK53_RS04540	0.89	+0.4
1,056,319	-		LRK53_RS04540	0.89	-1.3
1,056,409	+				+0.2
1,056,410	-				-0.7
1,056,410	-				-0.2
1,056,410	-				-0.4
1,056,433	+				-2.0
1,056,433	+				-1.2
1,056,434	-				-2.2
1,056,500	+				-1.2
1,056,500	+				-1.1
1,056,500	+				+0.9
1,056,500	+				+0.5
1,056,500	+				+0.5
1,056,500	+				-1.7
1,056,500	+				-1.6
1,056,500	+				-0.7
1,056,500	+				-0.2
1,056,501	-				+1.1
1,056,501	-				+1.2
1,056,501	-				-1.8
1,056,501	-				-0.8
1,056,501	-				-1.1
1,056,501	-				+0.0
1,056,527	+				-1.3
1,056,527	+				-2.1
1,056,527	+				-1.4
1,056,527	+				+0.4
1,056,527	+				+2.4
1,056,527	+				+0.1
1,056,528	-				-0.0
1,056,528	-				-0.6
1,056,542	+				-1.8
1,056,543	-				-1.2
1,056,543	-				+0.0
1,056,543	-				+0.2
1,056,543	-				-0.7
1,056,543	-				-0.2
1,056,635	+		LRK53_RS04545	0.19	+1.1
1,056,636	-		LRK53_RS04545	0.19	-1.7
1,056,636	-		LRK53_RS04545	0.19	+0.1
1,056,776	+		LRK53_RS04545	0.34	+0.7
1,056,776	+		LRK53_RS04545	0.34	-0.0
1,056,776	+		LRK53_RS04545	0.34	-1.2
1,056,776	+		LRK53_RS04545	0.34	-0.7
1,056,776	+		LRK53_RS04545	0.34	+1.4
1,056,776	+		LRK53_RS04545	0.34	-2.3
1,056,777	-		LRK53_RS04545	0.34	-1.4
1,056,777	-		LRK53_RS04545	0.34	-1.1
1,056,777	-		LRK53_RS04545	0.34	-1.0
1,056,777	-		LRK53_RS04545	0.34	+1.1
1,056,777	-		LRK53_RS04545	0.34	+1.2
1,056,777	-		LRK53_RS04545	0.34	-0.0
1,056,818	+		LRK53_RS04545	0.38	-0.4
1,056,819	-		LRK53_RS04545	0.38	-0.0
1,056,819	-		LRK53_RS04545	0.38	-1.2
1,056,819	-		LRK53_RS04545	0.38	-0.6