Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS28430

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
6,304,250	+				-0.8
6,304,250	+				-0.0
6,304,250	+				+0.0
6,304,250	+				+0.3
6,304,250	+				+1.5
6,304,250	+				+0.0
6,304,250	+				-2.0
6,304,250	+				+0.2
6,304,250	+				+0.5
6,304,251	-				+0.0
6,304,251	-				-1.2
6,304,251	-				+0.3
6,304,251	-				+0.3
6,304,251	-				-1.3
6,304,251	-				+0.0
6,304,268	+				-1.3
6,304,268	+				-1.6
6,304,268	+				-1.0
6,304,269	-				+0.0
6,304,269	-				-1.3
6,304,344	+		QEN71_RS28425	0.13	+0.5
6,304,345	-		QEN71_RS28425	0.13	+0.2
6,304,345	-		QEN71_RS28425	0.13	-0.8
6,304,404	+		QEN71_RS28425	0.23	-2.0
6,304,404	+		QEN71_RS28425	0.23	+0.0
6,304,404	+		QEN71_RS28425	0.23	-2.2
6,304,404	+		QEN71_RS28425	0.23	-0.9
6,304,404	+		QEN71_RS28425	0.23	-0.5
6,304,405	-		QEN71_RS28425	0.23	+0.8
6,304,405	-		QEN71_RS28425	0.23	-0.3
6,304,405	-		QEN71_RS28425	0.23	-1.4
6,304,405	-		QEN71_RS28425	0.23	-1.4
6,304,410	+		QEN71_RS28425	0.24	-1.3
6,304,410	+		QEN71_RS28425	0.24	+1.0
6,304,410	+		QEN71_RS28425	0.24	-1.0
6,304,410	+		QEN71_RS28425	0.24	-1.5
6,304,410	+		QEN71_RS28425	0.24	-0.5
6,304,411	-		QEN71_RS28425	0.24	-1.7
6,304,411	-		QEN71_RS28425	0.24	-1.1
6,304,411	-		QEN71_RS28425	0.24	+0.4
6,304,411	-		QEN71_RS28425	0.24	-0.4
6,304,413	+		QEN71_RS28425	0.24	-0.9
6,304,413	+		QEN71_RS28425	0.24	-0.3
6,304,413	+		QEN71_RS28425	0.24	-2.0
6,304,413	+		QEN71_RS28425	0.24	-0.9
6,304,414	-		QEN71_RS28425	0.24	-2.0
6,304,414	-		QEN71_RS28425	0.24	+0.0
6,304,414	-		QEN71_RS28425	0.24	-1.0
6,304,414	-		QEN71_RS28425	0.24	-0.7
6,304,414	-		QEN71_RS28425	0.24	-0.5
6,304,455	+		QEN71_RS28425	0.31	-0.9
6,304,566	+		QEN71_RS28425	0.49	+0.0
6,304,566	+		QEN71_RS28425	0.49	+2.0
6,304,566	+		QEN71_RS28425	0.49	-0.0
6,304,567	-		QEN71_RS28425	0.49	-1.1
6,304,602	-		QEN71_RS28425	0.54	-0.8
6,304,602	-		QEN71_RS28425	0.54	-0.8
6,304,614	+		QEN71_RS28425	0.56	-1.0
6,304,614	+		QEN71_RS28425	0.56	-0.9
6,304,614	+		QEN71_RS28425	0.56	-0.4
6,304,614	+		QEN71_RS28425	0.56	-0.2
6,304,614	+		QEN71_RS28425	0.56	-0.3
6,304,615	-		QEN71_RS28425	0.56	-0.3
6,304,615	-		QEN71_RS28425	0.56	-0.8
6,304,615	-		QEN71_RS28425	0.56	-1.5
6,304,615	-		QEN71_RS28425	0.56	-1.4
6,304,615	-		QEN71_RS28425	0.56	-1.2
6,304,615	-		QEN71_RS28425	0.56	-1.0
6,304,615	-		QEN71_RS28425	0.56	-0.5
6,304,615	-		QEN71_RS28425	0.56	-2.9
6,304,711	+		QEN71_RS28425	0.72	-1.0
6,304,711	+		QEN71_RS28425	0.72	-0.1
6,304,712	-		QEN71_RS28425	0.72	-0.7
6,304,877	+				+0.7
6,304,883	+				-0.7
6,304,883	+				-0.3
6,304,883	+				-0.3
6,304,883	+				+1.4
6,304,883	+				-0.2
6,304,883	+				+0.2
6,304,883	+				+0.6
6,304,883	+				-0.3
6,304,883	+				-0.4
6,304,884	-				+0.4
6,304,884	-				-0.4
6,304,928	+				+1.2
6,304,928	+				-1.0
6,304,928	+				+0.0
6,304,928	+				+1.6
6,304,928	+				+0.7
6,304,928	+				+0.4
6,304,928	+				+0.6
6,304,929	-				-0.2
6,304,929	-				-0.3
6,304,929	-				+1.6
6,304,963	+				-0.5
6,304,964	-				+0.6
6,305,087	+				-0.1
6,305,087	+				-0.1
6,305,087	+				-1.0
6,305,088	-				+0.3
6,305,088	-				-2.2
6,305,088	-				-0.7
6,305,122	+				+0.0
6,305,122	+				-1.0
6,305,122	+				-0.5
6,305,122	+				+0.3
6,305,122	+				-1.3
6,305,122	+				-0.4
6,305,123	-				-1.3
6,305,123	-				+3.2
6,305,124	+				-0.5
6,305,124	+				-0.1
6,305,124	+				+0.0
6,305,124	+				+0.2
6,305,124	+				-0.1
6,305,124	+				+0.8
6,305,125	-				+0.5
6,305,125	-				+1.0
6,305,148	+				+0.5
6,305,148	+				-0.7
6,305,148	+				+2.2
6,305,149	-				+1.5
6,305,336	+		QEN71_RS28430	0.30	+1.6
6,305,336	+		QEN71_RS28430	0.30	-0.6
6,305,336	+		QEN71_RS28430	0.30	+0.7
6,305,336	+		QEN71_RS28430	0.30	-0.5
6,305,337	-		QEN71_RS28430	0.30	+0.3
6,305,337	-		QEN71_RS28430	0.30	+1.7
6,305,337	-		QEN71_RS28430	0.30	+0.2
6,305,337	-		QEN71_RS28430	0.30	+1.4
6,305,337	-		QEN71_RS28430	0.30	-1.4
6,305,423	+		QEN71_RS28430	0.43	-0.7
6,305,423	+		QEN71_RS28430	0.43	-0.8
6,305,423	+		QEN71_RS28430	0.43	+2.0
6,305,423	+		QEN71_RS28430	0.43	+1.0
6,305,423	+		QEN71_RS28430	0.43	+0.3
6,305,423	+		QEN71_RS28430	0.43	-1.4
6,305,424	-		QEN71_RS28430	0.43	-0.5
6,305,424	-		QEN71_RS28430	0.43	-1.3
6,305,424	-		QEN71_RS28430	0.43	-0.6
6,305,561	+		QEN71_RS28430	0.64	+1.8
6,305,561	+		QEN71_RS28430	0.64	-0.0
6,305,561	+		QEN71_RS28430	0.64	+0.7
6,305,561	+		QEN71_RS28430	0.64	-0.5
6,305,561	+		QEN71_RS28430	0.64	-0.5
6,305,561	+		QEN71_RS28430	0.64	-0.1
6,305,561	+		QEN71_RS28430	0.64	-0.1
6,305,561	+		QEN71_RS28430	0.64	+0.1
6,305,561	+		QEN71_RS28430	0.64	+0.6
6,305,561	+		QEN71_RS28430	0.64	-0.5
6,305,561	+		QEN71_RS28430	0.64	+0.2
6,305,561	+		QEN71_RS28430	0.64	-1.1
6,305,561	+		QEN71_RS28430	0.64	+1.4
6,305,561	+		QEN71_RS28430	0.64	-1.8
6,305,561	+		QEN71_RS28430	0.64	-0.2
6,305,561	+		QEN71_RS28430	0.64	+0.8
6,305,561	+		QEN71_RS28430	0.64	+1.0
6,305,561	+		QEN71_RS28430	0.64	+0.8
6,305,561	+		QEN71_RS28430	0.64	+0.5
6,305,562	-		QEN71_RS28430	0.64	-2.0
6,305,562	-		QEN71_RS28430	0.64	-0.6
6,305,562	-		QEN71_RS28430	0.64	-1.2
6,305,562	-		QEN71_RS28430	0.64	-1.5
6,305,562	-		QEN71_RS28430	0.64	+0.0
6,305,562	-		QEN71_RS28430	0.64	+0.6
6,305,562	-		QEN71_RS28430	0.64	-0.5
6,305,562	-		QEN71_RS28430	0.64	-1.3
6,305,562	-		QEN71_RS28430	0.64	-1.1
6,305,562	-		QEN71_RS28430	0.64	+0.5
6,305,562	-		QEN71_RS28430	0.64	-1.3
6,305,562	-		QEN71_RS28430	0.64	+0.6
6,305,630	+		QEN71_RS28430	0.74	+0.8
6,305,631	-		QEN71_RS28430	0.74	-0.0
6,305,631	-		QEN71_RS28430	0.74	+0.2
6,305,631	-		QEN71_RS28430	0.74	+0.0
6,305,636	+		QEN71_RS28430	0.75	-0.1
6,305,654	+		QEN71_RS28430	0.77	-1.0
6,305,654	+		QEN71_RS28430	0.77	-0.2
6,305,654	+		QEN71_RS28430	0.77	+0.3
6,305,654	+		QEN71_RS28430	0.77	+0.3
6,305,654	+		QEN71_RS28430	0.77	+0.1
6,305,654	+		QEN71_RS28430	0.77	+0.5
6,305,655	-		QEN71_RS28430	0.78	-2.3
6,305,655	-		QEN71_RS28430	0.78	-0.3
6,305,655	-		QEN71_RS28430	0.78	-1.5
6,305,655	-		QEN71_RS28430	0.78	-0.1
6,305,655	-		QEN71_RS28430	0.78	+0.0
6,305,655	-		QEN71_RS28430	0.78	-0.2
6,305,729	+		QEN71_RS28430	0.89	+0.3
6,305,729	+		QEN71_RS28430	0.89	-1.1
6,305,729	+		QEN71_RS28430	0.89	-0.2
6,305,729	+		QEN71_RS28430	0.89	-1.0
6,305,729	+		QEN71_RS28430	0.89	+0.3
6,305,729	+		QEN71_RS28430	0.89	+0.2
6,305,729	+		QEN71_RS28430	0.89	-1.2
6,305,730	-		QEN71_RS28430	0.89	+0.2
6,305,730	-		QEN71_RS28430	0.89	-2.7
6,305,730	-		QEN71_RS28430	0.89	+1.3
6,305,730	-		QEN71_RS28430	0.89	+0.6
6,305,730	-		QEN71_RS28430	0.89	-0.3
6,305,730	-		QEN71_RS28430	0.89	-0.4
6,305,730	-		QEN71_RS28430	0.89	+0.0
6,305,730	-		QEN71_RS28430	0.89	-1.5
6,305,730	-		QEN71_RS28430	0.89	-0.5
6,305,730	-		QEN71_RS28430	0.89	-0.2
6,305,730	-		QEN71_RS28430	0.89	-0.5
6,305,730	-		QEN71_RS28430	0.89	-1.0
6,305,730	-		QEN71_RS28430	0.89	-0.2
6,305,730	-		QEN71_RS28430	0.89	+2.0
6,305,802	-				+0.6
6,305,819	+				-0.3
6,305,820	-				+2.1
6,305,820	-				+1.6
6,305,827	+				-0.4
6,305,827	+				+0.2
6,305,828	-				-0.6
6,306,028	-		QEN71_RS28435	0.27	+1.1
6,306,029	+		QEN71_RS28435	0.28	+1.0
6,306,029	+		QEN71_RS28435	0.28	+0.1
6,306,029	+		QEN71_RS28435	0.28	+0.1
6,306,029	+		QEN71_RS28435	0.28	-0.1
6,306,029	+		QEN71_RS28435	0.28	+0.5
6,306,029	+		QEN71_RS28435	0.28	-0.6
6,306,029	+		QEN71_RS28435	0.28	-0.5
6,306,029	+		QEN71_RS28435	0.28	+1.3
6,306,029	+		QEN71_RS28435	0.28	-0.9
6,306,029	+		QEN71_RS28435	0.28	+0.7
6,306,029	+		QEN71_RS28435	0.28	+0.3
6,306,029	+		QEN71_RS28435	0.28	+0.1
6,306,030	-		QEN71_RS28435	0.28	+0.6
6,306,030	-		QEN71_RS28435	0.28	+0.3
6,306,030	-		QEN71_RS28435	0.28	-0.7
6,306,030	-		QEN71_RS28435	0.28	+1.1
6,306,030	-		QEN71_RS28435	0.28	-0.8
6,306,030	-		QEN71_RS28435	0.28	+0.2
6,306,030	-		QEN71_RS28435	0.28	-1.1
6,306,030	-		QEN71_RS28435	0.28	+0.1
6,306,030	-		QEN71_RS28435	0.28	+0.5
6,306,030	-		QEN71_RS28435	0.28	+0.2
6,306,030	-		QEN71_RS28435	0.28	-1.2
6,306,030	-		QEN71_RS28435	0.28	-0.3
6,306,030	-		QEN71_RS28435	0.28	+0.4
6,306,053	+		QEN71_RS28435	0.32	+0.5
6,306,191	+		QEN71_RS28435	0.59	+0.5
6,306,191	+		QEN71_RS28435	0.59	-0.6
6,306,192	-		QEN71_RS28435	0.59	-0.7
6,306,192	-		QEN71_RS28435	0.59	+2.1
6,306,192	-		QEN71_RS28435	0.59	-0.9
6,306,192	-		QEN71_RS28435	0.59	-0.2
6,306,239	+		QEN71_RS28435	0.68	-0.1
6,306,240	-		QEN71_RS28435	0.68	+0.1
6,306,240	-		QEN71_RS28435	0.68	+2.1
6,306,240	-		QEN71_RS28435	0.68	+0.6
6,306,385	+				+1.2
6,306,385	+				+0.0
6,306,386	-				+0.0
6,306,386	-				-0.5
6,306,386	-				-0.6
6,306,423	+				-0.5
6,306,424	-				+0.6
6,306,424	-				+0.1
6,306,449	+				+0.3
6,306,450	-				+0.1
6,306,453	-				+1.7
6,306,464	-				+0.6
6,306,496	+				+1.6
6,306,496	+				-0.0
6,306,496	+				+1.3
6,306,496	+				-0.8
6,306,496	+				+0.8
6,306,496	+				+0.2
6,306,496	+				-0.1
6,306,496	+				-0.6
6,306,497	-				+0.7
6,306,497	-				-1.3
6,306,497	-				-0.8
6,306,497	-				+0.2
6,306,497	-				+0.5
6,306,497	-				+0.2
6,306,497	-				-0.0
6,306,613	+				-0.4
6,306,613	+				-0.7
6,306,613	+				-0.3
6,306,613	+				-0.9
6,306,613	+				+0.0
6,306,614	-				+0.2
6,306,614	-				-0.5
6,306,614	-				-0.0
6,306,614	-				-0.3
6,306,614	-				+0.9
6,306,614	-				+1.0
6,306,614	-				-0.0
6,306,614	-				-0.6
6,306,614	-				+0.6
6,306,706	+		QEN71_RS28440	0.14	-0.2
6,306,706	+		QEN71_RS28440	0.14	-0.5
6,306,706	+		QEN71_RS28440	0.14	-0.5
6,306,706	+		QEN71_RS28440	0.14	-1.0
6,306,706	+		QEN71_RS28440	0.14	+0.3
6,306,706	+		QEN71_RS28440	0.14	+0.1
6,306,707	-		QEN71_RS28440	0.14	+0.3
6,306,707	-		QEN71_RS28440	0.14	+0.0
6,306,707	-		QEN71_RS28440	0.14	+0.2