Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS26990

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
6,018,021	+				-0.5
6,018,079	+				+0.1
6,018,079	+				+0.7
6,018,079	+				-1.7
6,018,079	+				-0.7
6,018,079	+				-0.4
6,018,079	+				-0.5
6,018,079	+				+0.0
6,018,079	+				+0.5
6,018,079	+				+0.1
6,018,079	+				-0.8
6,018,079	+				-0.4
6,018,079	+				-0.5
6,018,079	+				-0.1
6,018,079	+				+0.6
6,018,079	+				-0.0
6,018,079	+				-1.3
6,018,079	+				+0.8
6,018,079	+				-0.7
6,018,079	+				+0.2
6,018,080	-				+0.1
6,018,080	-				-1.5
6,018,080	-				-1.3
6,018,080	-				+0.8
6,018,080	-				-0.2
6,018,080	-				+1.6
6,018,080	-				-0.5
6,018,080	-				+1.0
6,018,080	-				+0.1
6,018,080	-				-0.6
6,018,080	-				+0.8
6,018,080	-				-0.9
6,018,080	-				+0.3
6,018,080	-				-1.0
6,018,080	-				-0.2
6,018,080	-				+0.7
6,018,080	-				-0.5
6,018,080	-				+0.6
6,018,080	-				-0.3
6,018,080	-				+1.6
6,018,080	-				-0.8
6,018,080	-				-2.1
6,018,080	-				+0.7
6,018,080	-				-0.0
6,018,313	+		QEN71_RS26985	0.40	+0.0
6,018,313	+		QEN71_RS26985	0.40	-0.3
6,018,313	+		QEN71_RS26985	0.40	-0.3
6,018,313	+		QEN71_RS26985	0.40	-1.0
6,018,314	-		QEN71_RS26985	0.40	-0.9
6,018,314	-		QEN71_RS26985	0.40	-0.4
6,018,314	-		QEN71_RS26985	0.40	+0.2
6,018,351	+		QEN71_RS26985	0.47	-0.0
6,018,351	+		QEN71_RS26985	0.47	+0.5
6,018,351	+		QEN71_RS26985	0.47	-0.1
6,018,352	-		QEN71_RS26985	0.47	+0.0
6,018,352	-		QEN71_RS26985	0.47	+0.7
6,018,371	+		QEN71_RS26985	0.51	-0.3
6,018,372	-		QEN71_RS26985	0.51	-0.8
6,018,372	-		QEN71_RS26985	0.51	-0.4
6,018,538	-		QEN71_RS26985	0.83	-0.1
6,018,647	+				-0.3
6,018,647	+				+0.9
6,018,648	-				-0.4
6,018,648	-				-0.7
6,018,648	-				+1.0
6,018,648	-				+0.2
6,018,655	-				+1.6
6,018,702	+				+0.3
6,018,702	+				+0.3
6,018,702	+				+0.0
6,018,703	-				-1.7
6,018,703	-				-0.3
6,019,080	+		QEN71_RS26990	0.42	-0.3
6,019,080	+		QEN71_RS26990	0.42	+0.5
6,019,081	-		QEN71_RS26990	0.42	+0.7
6,019,081	-		QEN71_RS26990	0.42	+0.0
6,019,081	-		QEN71_RS26990	0.42	-0.6
6,019,081	-		QEN71_RS26990	0.42	+0.2
6,019,081	-		QEN71_RS26990	0.42	+0.6
6,019,081	-		QEN71_RS26990	0.42	-0.2
6,019,081	-		QEN71_RS26990	0.42	+1.0
6,019,081	-		QEN71_RS26990	0.42	-1.1
6,019,081	-		QEN71_RS26990	0.42	+0.3
6,019,158	+		QEN71_RS26990	0.50	-0.0
6,019,191	+		QEN71_RS26990	0.53	+1.0
6,019,242	+		QEN71_RS26990	0.58	-0.4
6,019,242	+		QEN71_RS26990	0.58	+0.1
6,019,242	+		QEN71_RS26990	0.58	-0.1
6,019,242	+		QEN71_RS26990	0.58	+0.2
6,019,242	+		QEN71_RS26990	0.58	+0.0
6,019,242	+		QEN71_RS26990	0.58	-0.6
6,019,242	+		QEN71_RS26990	0.58	-0.3
6,019,243	-		QEN71_RS26990	0.58	+0.4
6,019,243	-		QEN71_RS26990	0.58	+1.3
6,019,243	-		QEN71_RS26990	0.58	+0.1
6,019,243	-		QEN71_RS26990	0.58	+0.0
6,019,243	-		QEN71_RS26990	0.58	+0.0
6,019,243	-		QEN71_RS26990	0.58	+1.0
6,019,243	-		QEN71_RS26990	0.58	+0.1
6,019,326	+		QEN71_RS26990	0.67	-0.1
6,019,326	+		QEN71_RS26990	0.67	-2.0
6,019,327	-		QEN71_RS26990	0.67	+1.1
6,019,327	-		QEN71_RS26990	0.67	+0.6
6,019,327	-		QEN71_RS26990	0.67	-0.0
6,019,378	+		QEN71_RS26990	0.72	+0.4
6,019,379	-		QEN71_RS26990	0.72	+0.7
6,019,431	+		QEN71_RS26990	0.77	-0.7
6,019,432	-		QEN71_RS26990	0.77	+2.4
6,019,432	-		QEN71_RS26990	0.77	-1.8
6,019,448	-		QEN71_RS26990	0.79	-0.5
6,019,448	-		QEN71_RS26990	0.79	+0.3
6,019,448	-		QEN71_RS26990	0.79	-0.2
6,019,497	+		QEN71_RS26990	0.83	-2.4
6,019,497	+		QEN71_RS26990	0.83	-0.1
6,019,497	+		QEN71_RS26990	0.83	-0.8
6,019,498	-		QEN71_RS26990	0.84	-2.3
6,019,498	-		QEN71_RS26990	0.84	-0.5
6,019,498	-		QEN71_RS26990	0.84	+3.0
6,019,498	-		QEN71_RS26990	0.84	-1.0
6,019,498	-		QEN71_RS26990	0.84	+0.3
6,019,498	-		QEN71_RS26990	0.84	+0.2
6,019,614	+				-0.2
6,019,614	+				-1.2
6,019,614	+				-0.4
6,019,615	-				-0.5
6,019,615	-				-0.1
6,019,615	-				+0.0
6,019,657	+				+0.6
6,019,657	+				+2.9
6,019,708	+				-0.5
6,019,708	+				-0.8
6,019,708	+				+0.2
6,019,709	-				-1.7
6,019,727	-				+0.7
6,019,727	-				+0.0
6,020,103	+		QEN71_RS26995	0.23	-0.7
6,020,103	+		QEN71_RS26995	0.23	+0.0
6,020,104	-		QEN71_RS26995	0.24	-1.2
6,020,104	-		QEN71_RS26995	0.24	-0.0
6,020,104	-		QEN71_RS26995	0.24	-0.5
6,020,104	-		QEN71_RS26995	0.24	+0.2
6,020,104	-		QEN71_RS26995	0.24	+0.4
6,020,104	-		QEN71_RS26995	0.24	-0.9
6,020,104	-		QEN71_RS26995	0.24	-0.2
6,020,154	+		QEN71_RS26995	0.27	-1.0
6,020,154	+		QEN71_RS26995	0.27	-0.1
6,020,155	-		QEN71_RS26995	0.27	-0.8
6,020,155	-		QEN71_RS26995	0.27	+0.0
6,020,155	-		QEN71_RS26995	0.27	+0.9
6,020,155	-		QEN71_RS26995	0.27	+0.4
6,020,155	-		QEN71_RS26995	0.27	-0.3
6,020,155	-		QEN71_RS26995	0.27	+0.6
6,020,160	+		QEN71_RS26995	0.28	-0.5
6,020,160	+		QEN71_RS26995	0.28	+0.4
6,020,161	-		QEN71_RS26995	0.28	-0.2
6,020,174	+		QEN71_RS26995	0.29	-0.3
6,020,195	+		QEN71_RS26995	0.30	-0.5
6,020,195	+		QEN71_RS26995	0.30	+1.1
6,020,196	-		QEN71_RS26995	0.30	+0.3
6,020,196	-		QEN71_RS26995	0.30	+0.2
6,020,196	-		QEN71_RS26995	0.30	+2.0
6,020,196	-		QEN71_RS26995	0.30	+0.6
6,020,196	-		QEN71_RS26995	0.30	+1.4
6,020,225	+		QEN71_RS26995	0.33	+0.6
6,020,226	-		QEN71_RS26995	0.33	+1.2
6,020,226	-		QEN71_RS26995	0.33	+0.5
6,020,438	+		QEN71_RS26995	0.49	-0.3
6,020,438	+		QEN71_RS26995	0.49	+0.2
6,020,439	-		QEN71_RS26995	0.49	-0.6
6,020,439	-		QEN71_RS26995	0.49	+1.8
6,020,439	-		QEN71_RS26995	0.49	+0.7
6,020,439	-		QEN71_RS26995	0.49	+1.0
6,020,439	-		QEN71_RS26995	0.49	-0.5
6,020,439	-		QEN71_RS26995	0.49	-1.1
6,020,486	+		QEN71_RS26995	0.52	+0.1
6,020,486	+		QEN71_RS26995	0.52	+0.0
6,020,486	+		QEN71_RS26995	0.52	+0.5
6,020,486	+		QEN71_RS26995	0.52	+0.0
6,020,487	-		QEN71_RS26995	0.52	-0.3
6,020,487	-		QEN71_RS26995	0.52	+1.5
6,020,487	-		QEN71_RS26995	0.52	-0.6