Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS22205

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
4,927,959	-		QEN71_RS22200	0.53	-0.1
4,928,009	-		QEN71_RS22200	0.58	-0.8
4,928,009	-		QEN71_RS22200	0.58	+0.5
4,928,047	+		QEN71_RS22200	0.61	-1.9
4,928,048	-		QEN71_RS22200	0.61	+0.2
4,928,056	+		QEN71_RS22200	0.62	-1.9
4,928,056	+		QEN71_RS22200	0.62	-1.3
4,928,056	+		QEN71_RS22200	0.62	-0.2
4,928,056	+		QEN71_RS22200	0.62	-2.5
4,928,056	+		QEN71_RS22200	0.62	-1.5
4,928,056	+		QEN71_RS22200	0.62	-1.9
4,928,056	+		QEN71_RS22200	0.62	-0.9
4,928,056	+		QEN71_RS22200	0.62	-2.6
4,928,056	+		QEN71_RS22200	0.62	-0.7
4,928,056	+		QEN71_RS22200	0.62	-1.3
4,928,057	-		QEN71_RS22200	0.62	-0.7
4,928,057	-		QEN71_RS22200	0.62	-2.6
4,928,057	-		QEN71_RS22200	0.62	-0.6
4,928,057	-		QEN71_RS22200	0.62	-1.0
4,928,057	-		QEN71_RS22200	0.62	+0.2
4,928,057	-		QEN71_RS22200	0.62	-1.3
4,928,490	+				-1.1
4,928,499	+				-1.1
4,928,499	+				-1.8
4,928,499	+				-1.3
4,928,499	+				-1.5
4,928,500	-				-1.2
4,928,500	-				+0.1
4,928,500	-				-1.1
4,928,549	+				-0.4
4,928,550	-				-0.9
4,928,565	+				+0.0
4,928,566	-				+0.3
4,928,594	-				-1.3
4,928,594	-				-1.1
4,928,635	+				-1.1
4,928,636	-				+0.0
4,928,636	-				-1.0
4,928,636	-				-0.3
4,928,701	+				-2.3
4,928,719	+				-0.5
4,928,720	-				-4.7
4,928,914	+		QEN71_RS22205	0.11	-2.1
4,928,914	+		QEN71_RS22205	0.11	-0.5
4,928,914	+		QEN71_RS22205	0.11	-0.4
4,928,914	+		QEN71_RS22205	0.11	-1.3
4,928,914	+		QEN71_RS22205	0.11	-1.5
4,929,016	+		QEN71_RS22205	0.16	-2.4
4,929,016	+		QEN71_RS22205	0.16	-0.9
4,929,017	-		QEN71_RS22205	0.16	-3.8
4,929,017	-		QEN71_RS22205	0.16	-3.1
4,929,017	-		QEN71_RS22205	0.16	-3.8
4,929,058	+		QEN71_RS22205	0.18	-3.3
4,929,058	+		QEN71_RS22205	0.18	-0.4
4,929,059	-		QEN71_RS22205	0.18	-5.0
4,929,059	-		QEN71_RS22205	0.18	-1.0
4,929,059	-		QEN71_RS22205	0.18	-4.2
4,929,059	-		QEN71_RS22205	0.18	-4.2
4,929,059	-		QEN71_RS22205	0.18	-3.2
4,929,059	-		QEN71_RS22205	0.18	-2.0
4,929,110	+		QEN71_RS22205	0.21	-1.0
4,929,110	+		QEN71_RS22205	0.21	-1.9
4,929,110	+		QEN71_RS22205	0.21	-1.5
4,929,110	+		QEN71_RS22205	0.21	-0.2
4,929,110	+		QEN71_RS22205	0.21	-1.0
4,929,110	+		QEN71_RS22205	0.21	-0.8
4,929,111	-		QEN71_RS22205	0.21	-6.3
4,929,111	-		QEN71_RS22205	0.21	-4.0
4,929,148	+		QEN71_RS22205	0.23	-1.2
4,929,148	+		QEN71_RS22205	0.23	-0.6
4,929,148	+		QEN71_RS22205	0.23	-1.3
4,929,148	+		QEN71_RS22205	0.23	-0.9
4,929,148	+		QEN71_RS22205	0.23	-2.2
4,929,149	-		QEN71_RS22205	0.23	-2.7
4,929,149	-		QEN71_RS22205	0.23	-3.3
4,929,149	-		QEN71_RS22205	0.23	-3.8
4,929,149	-		QEN71_RS22205	0.23	-3.3
4,929,149	-		QEN71_RS22205	0.23	-4.3
4,929,163	+		QEN71_RS22205	0.23	-1.6
4,929,164	-		QEN71_RS22205	0.23	-3.7
4,929,164	-		QEN71_RS22205	0.23	-2.6
4,929,172	+		QEN71_RS22205	0.24	-0.4
4,929,172	+		QEN71_RS22205	0.24	-2.1
4,929,172	+		QEN71_RS22205	0.24	-1.3
4,929,172	+		QEN71_RS22205	0.24	-1.6
4,929,172	+		QEN71_RS22205	0.24	-1.8
4,929,172	+		QEN71_RS22205	0.24	-0.6
4,929,172	+		QEN71_RS22205	0.24	-0.3
4,929,172	+		QEN71_RS22205	0.24	-2.2
4,929,172	+		QEN71_RS22205	0.24	+0.1
4,929,172	+		QEN71_RS22205	0.24	-0.9
4,929,173	-		QEN71_RS22205	0.24	-4.4
4,929,173	-		QEN71_RS22205	0.24	-3.9
4,929,173	-		QEN71_RS22205	0.24	-3.0
4,929,173	-		QEN71_RS22205	0.24	-3.5
4,929,173	-		QEN71_RS22205	0.24	-1.3
4,929,173	-		QEN71_RS22205	0.24	-3.0
4,929,173	-		QEN71_RS22205	0.24	-4.8
4,929,173	-		QEN71_RS22205	0.24	-2.5
4,929,173	-		QEN71_RS22205	0.24	-5.7
4,929,173	-		QEN71_RS22205	0.24	-1.0
4,929,211	+		QEN71_RS22205	0.26	-0.9
4,929,212	-		QEN71_RS22205	0.26	-2.0
4,929,250	+		QEN71_RS22205	0.28	-0.8
4,929,250	+		QEN71_RS22205	0.28	-1.7
4,929,250	+		QEN71_RS22205	0.28	-0.8
4,929,250	+		QEN71_RS22205	0.28	-0.2
4,929,251	-		QEN71_RS22205	0.28	-2.2
4,929,251	-		QEN71_RS22205	0.28	-2.4
4,929,251	-		QEN71_RS22205	0.28	-3.7
4,929,251	-		QEN71_RS22205	0.28	-4.1
4,929,251	-		QEN71_RS22205	0.28	-4.0
4,929,251	-		QEN71_RS22205	0.28	-3.9
4,929,265	+		QEN71_RS22205	0.28	-1.5
4,929,265	+		QEN71_RS22205	0.28	-1.3
4,929,265	+		QEN71_RS22205	0.28	-1.3
4,929,265	+		QEN71_RS22205	0.28	-1.6
4,929,265	+		QEN71_RS22205	0.28	-1.7
4,929,265	+		QEN71_RS22205	0.28	-2.0
4,929,265	+		QEN71_RS22205	0.28	-1.3
4,929,265	+		QEN71_RS22205	0.28	-1.4
4,929,265	+		QEN71_RS22205	0.28	-0.8
4,929,265	+		QEN71_RS22205	0.28	-2.4
4,929,266	-		QEN71_RS22205	0.28	-3.6
4,929,266	-		QEN71_RS22205	0.28	-3.9
4,929,266	-		QEN71_RS22205	0.28	-4.6
4,929,266	-		QEN71_RS22205	0.28	-3.8
4,929,266	-		QEN71_RS22205	0.28	-4.5
4,929,266	-		QEN71_RS22205	0.28	-3.2
4,929,539	+		QEN71_RS22205	0.42	-1.2
4,929,539	+		QEN71_RS22205	0.42	-0.6
4,929,539	+		QEN71_RS22205	0.42	-1.2
4,929,539	+		QEN71_RS22205	0.42	-2.8
4,929,539	+		QEN71_RS22205	0.42	-1.9
4,929,540	-		QEN71_RS22205	0.42	-2.5
4,929,540	-		QEN71_RS22205	0.42	-1.7
4,929,540	-		QEN71_RS22205	0.42	-2.1
4,929,540	-		QEN71_RS22205	0.42	-1.8
4,929,540	-		QEN71_RS22205	0.42	-3.0
4,929,540	-		QEN71_RS22205	0.42	-2.6
4,929,540	-		QEN71_RS22205	0.42	-2.3
4,929,540	-		QEN71_RS22205	0.42	-2.4
4,929,607	+		QEN71_RS22205	0.46	-1.0
4,929,607	+		QEN71_RS22205	0.46	-0.6
4,929,607	+		QEN71_RS22205	0.46	-0.9
4,929,607	+		QEN71_RS22205	0.46	-1.2
4,929,607	+		QEN71_RS22205	0.46	+0.5
4,929,607	+		QEN71_RS22205	0.46	-2.2
4,929,607	+		QEN71_RS22205	0.46	-1.9
4,929,607	+		QEN71_RS22205	0.46	-0.5
4,929,608	-		QEN71_RS22205	0.46	-1.6
4,929,608	-		QEN71_RS22205	0.46	-4.1
4,929,608	-		QEN71_RS22205	0.46	-1.5
4,929,608	-		QEN71_RS22205	0.46	-2.6
4,929,608	-		QEN71_RS22205	0.46	-3.1
4,929,608	-		QEN71_RS22205	0.46	-3.1
4,929,664	+		QEN71_RS22205	0.48	-0.7
4,929,664	+		QEN71_RS22205	0.48	-1.8
4,929,665	-		QEN71_RS22205	0.49	-3.6
4,929,665	-		QEN71_RS22205	0.49	-1.5
4,929,665	-		QEN71_RS22205	0.49	-3.0
4,929,665	-		QEN71_RS22205	0.49	-3.3
4,929,730	+		QEN71_RS22205	0.52	-0.4
4,929,730	+		QEN71_RS22205	0.52	-3.0
4,929,730	+		QEN71_RS22205	0.52	+0.3
4,929,730	+		QEN71_RS22205	0.52	-2.3
4,929,730	+		QEN71_RS22205	0.52	-2.3
4,929,730	+		QEN71_RS22205	0.52	+0.8
4,929,730	+		QEN71_RS22205	0.52	-1.0
4,929,730	+		QEN71_RS22205	0.52	-0.5
4,929,730	+		QEN71_RS22205	0.52	-3.1
4,929,730	+		QEN71_RS22205	0.52	-1.8
4,929,730	+		QEN71_RS22205	0.52	-1.1
4,929,730	+		QEN71_RS22205	0.52	-1.6
4,929,730	+		QEN71_RS22205	0.52	-1.2
4,929,731	-		QEN71_RS22205	0.52	-3.2
4,929,731	-		QEN71_RS22205	0.52	-1.1
4,929,731	-		QEN71_RS22205	0.52	-2.3
4,929,731	-		QEN71_RS22205	0.52	-1.1
4,929,731	-		QEN71_RS22205	0.52	-4.9
4,929,731	-		QEN71_RS22205	0.52	-4.5
4,929,732	-		QEN71_RS22205	0.52	-1.8
4,929,733	+		QEN71_RS22205	0.52	-1.6
4,929,733	+		QEN71_RS22205	0.52	-0.6
4,929,733	+		QEN71_RS22205	0.52	-0.4
4,929,733	+		QEN71_RS22205	0.52	-1.8
4,929,733	+		QEN71_RS22205	0.52	-0.7
4,929,733	+		QEN71_RS22205	0.52	+0.3
4,929,733	+		QEN71_RS22205	0.52	-1.5
4,929,734	-		QEN71_RS22205	0.52	-1.8
4,929,734	-		QEN71_RS22205	0.52	-1.4
4,930,105	+		QEN71_RS22205	0.71	-0.2
4,930,106	-		QEN71_RS22205	0.71	-0.6
4,930,123	+		QEN71_RS22205	0.72	-0.4
4,930,124	-		QEN71_RS22205	0.72	-0.8
4,930,124	-		QEN71_RS22205	0.72	-0.4
4,930,124	-		QEN71_RS22205	0.72	-0.8
4,930,124	-		QEN71_RS22205	0.72	-0.5
4,930,124	-		QEN71_RS22205	0.72	-1.8
4,930,138	+		QEN71_RS22205	0.72	-2.3
4,930,138	+		QEN71_RS22205	0.72	+0.2
4,930,138	+		QEN71_RS22205	0.72	-4.0
4,930,138	+		QEN71_RS22205	0.72	-1.0
4,930,138	+		QEN71_RS22205	0.72	-2.6
4,930,138	+		QEN71_RS22205	0.72	-1.4
4,930,139	-		QEN71_RS22205	0.72	-2.4
4,930,139	-		QEN71_RS22205	0.72	-0.7
4,930,139	-		QEN71_RS22205	0.72	-0.9
4,930,139	-		QEN71_RS22205	0.72	-0.5
4,930,139	-		QEN71_RS22205	0.72	+0.2
4,930,139	-		QEN71_RS22205	0.72	-0.3
4,930,139	-		QEN71_RS22205	0.72	-1.3
4,930,139	-		QEN71_RS22205	0.72	-0.8
4,930,139	-		QEN71_RS22205	0.72	-0.3
4,930,139	-		QEN71_RS22205	0.72	-0.9
4,930,139	-		QEN71_RS22205	0.72	-1.4
4,930,139	-		QEN71_RS22205	0.72	-1.9
4,930,144	+		QEN71_RS22205	0.73	-1.5
4,930,144	+		QEN71_RS22205	0.73	-3.8
4,930,144	+		QEN71_RS22205	0.73	-2.9
4,930,144	+		QEN71_RS22205	0.73	-0.8
4,930,144	+		QEN71_RS22205	0.73	-0.8
4,930,145	-		QEN71_RS22205	0.73	-2.1
4,930,145	-		QEN71_RS22205	0.73	+0.4
4,930,145	-		QEN71_RS22205	0.73	-0.4
4,930,145	-		QEN71_RS22205	0.73	-0.7
4,930,145	-		QEN71_RS22205	0.73	+0.4
4,930,145	-		QEN71_RS22205	0.73	-0.2
4,930,145	-		QEN71_RS22205	0.73	+0.3
4,930,145	-		QEN71_RS22205	0.73	-1.0
4,930,255	+		QEN71_RS22205	0.78	-0.9
4,930,440	+		QEN71_RS22205	0.87	-2.2
4,930,440	+		QEN71_RS22205	0.87	-0.5
4,930,441	-		QEN71_RS22205	0.88	-1.2
4,930,441	-		QEN71_RS22205	0.88	-0.2
4,930,441	-		QEN71_RS22205	0.88	-1.8
4,930,526	+				-2.4
4,930,526	+				-1.5
4,930,527	-				-1.8
4,930,527	-				-0.5
4,930,527	-				-0.5
4,930,735	+				-2.6
4,930,735	+				-3.1
4,930,735	+				-3.1
4,930,772	+				-1.0
4,930,772	+				-1.9
4,930,772	+				-2.2
4,930,773	-				+0.0
4,930,773	-				+1.5
4,930,773	-				-0.6
4,930,773	-				+0.3
4,930,855	-				+0.6
4,930,882	+				-0.7
4,930,882	+				-0.6
4,930,883	-				-1.3
4,930,883	-				-0.0
4,930,883	-				-0.5
4,930,894	-				-0.2
4,931,004	+				+0.5
4,931,014	+				-0.4
4,931,014	+				-1.2
4,931,014	+				-0.1
4,931,014	+				-0.2
4,931,014	+				-0.6
4,931,015	-				-0.7
4,931,015	-				-0.1
4,931,015	-				+0.8
4,931,034	+				-1.2
4,931,034	+				+2.7
4,931,035	-				+0.4
4,931,051	+				-0.2
4,931,102	+				-0.0
4,931,102	+				+0.3
4,931,102	+				+1.0
4,931,102	+				+0.8
4,931,102	+				+0.7
4,931,102	+				+0.6
4,931,102	+				-1.6
4,931,102	+				+0.3
4,931,102	+				-0.5
4,931,102	+				-0.3
4,931,102	+				+0.6
4,931,102	+				-0.3
4,931,103	-				-0.3
4,931,103	-				-0.8
4,931,103	-				+0.2
4,931,103	-				-0.6
4,931,103	-				+0.3
4,931,103	-				-0.9
4,931,103	-				-1.3
4,931,103	-				-0.8
4,931,103	-				+2.0
4,931,114	+				+0.1
4,931,114	+				+0.5
4,931,114	+				-0.2
4,931,114	+				+0.5
4,931,115	-				+0.4
4,931,182	+				+0.1
4,931,183	-				+0.1
4,931,293	+		QEN71_RS22210	0.20	+0.3
4,931,293	+		QEN71_RS22210	0.20	-0.7
4,931,293	+		QEN71_RS22210	0.20	+0.4
4,931,293	+		QEN71_RS22210	0.20	-0.5
4,931,293	+		QEN71_RS22210	0.20	-0.5
4,931,293	+		QEN71_RS22210	0.20	+0.0
4,931,294	-		QEN71_RS22210	0.20	+0.4
4,931,294	-		QEN71_RS22210	0.20	+0.1
4,931,294	-		QEN71_RS22210	0.20	-0.1
4,931,294	-		QEN71_RS22210	0.20	-0.9
4,931,294	-		QEN71_RS22210	0.20	+1.1
4,931,294	-		QEN71_RS22210	0.20	+0.2
4,931,294	-		QEN71_RS22210	0.20	+0.2
4,931,431	+		QEN71_RS22210	0.37	-1.3
4,931,431	+		QEN71_RS22210	0.37	-0.8
4,931,431	+		QEN71_RS22210	0.37	-0.1
4,931,431	+		QEN71_RS22210	0.37	-0.3
4,931,431	+		QEN71_RS22210	0.37	+0.6
4,931,431	+		QEN71_RS22210	0.37	-1.3
4,931,431	+		QEN71_RS22210	0.37	+0.4
4,931,432	-		QEN71_RS22210	0.37	+0.4
4,931,432	-		QEN71_RS22210	0.37	+1.0
4,931,432	-		QEN71_RS22210	0.37	+0.2
4,931,486	+		QEN71_RS22210	0.43	+0.3
4,931,487	-		QEN71_RS22210	0.43	-0.9
4,931,601	+		QEN71_RS22210	0.57	+1.0
4,931,601	+		QEN71_RS22210	0.57	-0.6