Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS22190

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
4,924,866	+		QEN71_RS22185	0.67	+0.7
4,924,866	+		QEN71_RS22185	0.67	+0.0
4,924,866	+		QEN71_RS22185	0.67	+0.2
4,924,866	+		QEN71_RS22185	0.67	-1.3
4,924,866	+		QEN71_RS22185	0.67	+2.1
4,924,867	-		QEN71_RS22185	0.67	+0.4
4,924,867	-		QEN71_RS22185	0.67	+0.1
4,924,867	-		QEN71_RS22185	0.67	+1.1
4,924,872	+		QEN71_RS22185	0.67	+0.9
4,924,873	-		QEN71_RS22185	0.67	-0.5
4,925,181	+		QEN71_RS22185	0.90	+0.5
4,925,181	+		QEN71_RS22185	0.90	+0.8
4,925,181	+		QEN71_RS22185	0.90	+0.4
4,925,182	-		QEN71_RS22185	0.90	-0.8
4,925,182	-		QEN71_RS22185	0.90	+0.5
4,925,182	-		QEN71_RS22185	0.90	+0.7
4,925,326	+				-0.5
4,925,326	+				+0.6
4,925,326	+				+1.3
4,925,326	+				-0.5
4,925,326	+				-0.5
4,925,326	+				+0.5
4,925,326	+				+1.1
4,925,326	+				+0.4
4,925,327	-				-0.0
4,925,327	-				-0.5
4,925,327	-				-0.6
4,925,327	-				+1.0
4,925,327	-				-0.1
4,925,327	-				+0.5
4,925,363	+				-0.2
4,925,363	+				+1.0
4,925,363	+				-0.4
4,925,363	+				-0.8
4,925,363	+				-0.9
4,925,363	+				-0.0
4,925,363	+				+0.8
4,925,363	+				+0.8
4,925,363	+				+0.5
4,925,363	+				-0.5
4,925,363	+				+1.3
4,925,364	-				+0.2
4,925,364	-				-0.6
4,925,364	-				-0.2
4,925,364	-				-0.4
4,925,364	-				-0.0
4,925,364	-				+1.6
4,925,364	-				-0.1
4,925,364	-				-0.6
4,925,503	+				+1.0
4,925,503	+				-0.9
4,925,503	+				+1.8
4,925,504	-				-0.5
4,925,506	+				-0.6
4,925,506	+				-0.5
4,925,506	+				+1.5
4,925,506	+				-2.2
4,925,506	+				+0.2
4,925,507	-				-1.2
4,925,507	-				+2.4
4,925,507	-				+1.1
4,925,507	-				+0.8
4,925,507	-				-0.2
4,925,507	-				+0.2
4,925,507	-				+1.1
4,925,507	-				+1.4
4,925,508	+				-0.3
4,925,508	+				+1.0
4,925,508	+				-0.8
4,925,509	-				-0.2
4,925,691	+				-1.3
4,925,691	+				-1.0
4,925,691	+				+1.6
4,925,692	-				+0.1
4,925,692	-				-1.3
4,925,818	+		QEN71_RS22190	0.22	-2.4
4,925,818	+		QEN71_RS22190	0.22	-2.5
4,925,818	+		QEN71_RS22190	0.22	-0.5
4,925,819	-		QEN71_RS22190	0.22	-1.2
4,925,820	+		QEN71_RS22190	0.22	-5.1
4,925,820	+		QEN71_RS22190	0.22	-3.6
4,925,820	+		QEN71_RS22190	0.22	-2.6
4,925,820	+		QEN71_RS22190	0.22	-4.1
4,925,820	+		QEN71_RS22190	0.22	-2.9
4,925,820	+		QEN71_RS22190	0.22	-2.0
4,925,820	+		QEN71_RS22190	0.22	-2.8
4,925,821	-		QEN71_RS22190	0.23	-1.9
4,925,821	-		QEN71_RS22190	0.23	-0.8
4,925,821	-		QEN71_RS22190	0.23	-0.2
4,925,821	-		QEN71_RS22190	0.23	-3.8
4,925,821	-		QEN71_RS22190	0.23	-0.2
4,925,821	-		QEN71_RS22190	0.23	-0.4
4,925,821	-		QEN71_RS22190	0.23	-2.7
4,925,821	-		QEN71_RS22190	0.23	-2.9
4,925,821	-		QEN71_RS22190	0.23	-1.7
4,925,821	-		QEN71_RS22190	0.23	-2.7
4,925,821	-		QEN71_RS22190	0.23	-0.6
4,925,821	-		QEN71_RS22190	0.23	-0.9
4,925,821	-		QEN71_RS22190	0.23	-2.9
4,925,821	-		QEN71_RS22190	0.23	-2.3
4,925,904	+		QEN71_RS22190	0.37	-1.4
4,925,905	-		QEN71_RS22190	0.37	-0.0
4,925,973	+		QEN71_RS22190	0.49	-4.8
4,925,973	+		QEN71_RS22190	0.49	-4.1
4,925,973	+		QEN71_RS22190	0.49	-0.5
4,925,973	+		QEN71_RS22190	0.49	-3.5
4,925,973	+		QEN71_RS22190	0.49	-2.5
4,925,974	-		QEN71_RS22190	0.49	-4.0
4,925,974	-		QEN71_RS22190	0.49	-2.7
4,925,974	-		QEN71_RS22190	0.49	-3.3
4,925,974	-		QEN71_RS22190	0.49	-3.7
4,926,006	+		QEN71_RS22190	0.55	-3.3
4,926,007	-		QEN71_RS22190	0.55	-3.0
4,926,183	+		QEN71_RS22190	0.85	-4.5
4,926,183	+		QEN71_RS22190	0.85	-2.6
4,926,183	+		QEN71_RS22190	0.85	-3.1
4,926,183	+		QEN71_RS22190	0.85	+0.2
4,926,183	+		QEN71_RS22190	0.85	-2.3
4,926,184	-		QEN71_RS22190	0.85	-2.1
4,926,184	-		QEN71_RS22190	0.85	-0.2
4,926,184	-		QEN71_RS22190	0.85	-1.6
4,926,184	-		QEN71_RS22190	0.85	-2.6
4,926,184	-		QEN71_RS22190	0.85	-2.0
4,926,184	-		QEN71_RS22190	0.85	-5.5
4,926,184	-		QEN71_RS22190	0.85	-0.6
4,926,184	-		QEN71_RS22190	0.85	-1.8
4,926,184	-		QEN71_RS22190	0.85	-2.6
4,926,204	+		QEN71_RS22190	0.89	-4.0
4,926,204	+		QEN71_RS22190	0.89	-2.4
4,926,204	+		QEN71_RS22190	0.89	-0.5
4,926,204	+		QEN71_RS22190	0.89	-3.0
4,926,205	-		QEN71_RS22190	0.89	-1.5
4,926,205	-		QEN71_RS22190	0.89	-3.4
4,926,205	-		QEN71_RS22190	0.89	-2.0
4,926,205	-		QEN71_RS22190	0.89	-0.5
4,926,223	-				-0.9
4,926,229	+				-1.2
4,926,256	+				-0.8
4,926,256	+				-2.1
4,926,257	-				-3.2
4,926,257	-				-3.6
4,926,257	-				-3.2
4,926,257	-				-2.6
4,926,257	-				-2.3
4,926,259	+				-1.9
4,926,259	+				-0.2
4,926,260	-				-0.2
4,926,260	-				-1.0
4,926,260	-				-3.6
4,926,270	+				-1.3
4,926,270	+				-2.7
4,926,270	+				-1.0
4,926,271	-				+0.3
4,926,426	-				-1.4
4,926,426	-				-0.8
4,926,426	-				+0.2
4,926,426	-				-2.5
4,926,604	+		QEN71_RS22195	0.25	-2.4
4,926,604	+		QEN71_RS22195	0.25	-2.2
4,926,604	+		QEN71_RS22195	0.25	-1.6
4,926,604	+		QEN71_RS22195	0.25	-2.4
4,926,605	-		QEN71_RS22195	0.25	-2.2
4,926,605	-		QEN71_RS22195	0.25	-1.9
4,926,605	-		QEN71_RS22195	0.25	-0.5
4,926,605	-		QEN71_RS22195	0.25	-2.6
4,926,700	+		QEN71_RS22195	0.38	-0.2
4,926,701	-		QEN71_RS22195	0.38	-1.7
4,926,701	-		QEN71_RS22195	0.38	+0.5
4,926,701	-		QEN71_RS22195	0.38	-2.5
4,926,701	-		QEN71_RS22195	0.38	-0.5
4,926,701	-		QEN71_RS22195	0.38	-1.4
4,927,087	+				-0.6
4,927,087	+				-0.5
4,927,087	+				-1.3
4,927,087	+				-1.1
4,927,087	+				-1.8
4,927,087	+				+0.4
4,927,087	+				-0.8
4,927,088	-				-3.3
4,927,088	-				-1.0
4,927,088	-				-1.4
4,927,088	-				-2.9
4,927,088	-				-2.9
4,927,088	-				-2.2
4,927,088	-				-1.7
4,927,134	+				+1.2
4,927,134	+				-1.2
4,927,135	-				-1.5
4,927,135	-				-2.1
4,927,138	+				-1.3
4,927,138	+				-0.2
4,927,138	+				-1.5
4,927,138	+				-0.5
4,927,138	+				+0.8
4,927,138	+				-0.6
4,927,139	-				-4.6
4,927,139	-				-0.4
4,927,157	+				-0.6
4,927,157	+				+0.2
4,927,157	+				-2.2
4,927,157	+				-2.8
4,927,157	+				-0.3
4,927,157	+				-2.1
4,927,157	+				-1.8
4,927,157	+				-1.7
4,927,158	-				-2.8
4,927,158	-				-2.2
4,927,158	-				-0.8
4,927,158	-				-2.6
4,927,158	-				-2.6