Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS22015

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
4,883,078	+				-0.9
4,883,078	+				+0.5
4,883,078	+				+2.2
4,883,079	-				-1.8
4,883,079	-				-0.2
4,883,211	+				-0.2
4,883,211	+				+0.8
4,883,211	+				+0.6
4,883,211	+				-0.3
4,883,211	+				+0.0
4,883,211	+				-1.5
4,883,212	-				-0.6
4,883,212	-				-0.0
4,883,212	-				-0.4
4,883,212	-				-0.5
4,883,277	+				+1.2
4,883,277	+				+0.5
4,883,278	-				-0.8
4,883,278	-				-0.1
4,883,278	-				+0.8
4,883,282	+				-1.9
4,883,282	+				-0.0
4,883,282	+				+0.0
4,883,282	+				-0.6
4,883,282	+				-0.4
4,883,283	-				-0.1
4,883,319	+				+0.2
4,883,320	-				+0.3
4,883,320	-				-0.1
4,883,323	-				+0.6
4,883,333	+				-0.5
4,883,333	+				-2.1
4,883,334	-				+0.8
4,883,334	-				-1.6
4,883,510	+				+0.2
4,883,510	+				-1.7
4,883,510	+				+0.2
4,883,511	-				+0.9
4,883,511	-				-1.0
4,883,511	-				+0.8
4,883,511	-				-0.7
4,883,643	-				-0.2
4,883,643	-				+0.1
4,883,643	-				-0.2
4,883,937	-				+0.1
4,883,951	-				+0.5
4,883,998	+				-1.0
4,883,999	-				-1.3
4,883,999	-				-0.5
4,884,072	+				-2.7
4,884,072	+				-2.5
4,884,072	+				-1.0
4,884,072	+				-0.3
4,884,072	+				-2.1
4,884,073	-				-3.5
4,884,111	+				-2.1
4,884,111	+				-1.2
4,884,111	+				-2.3
4,884,111	+				-0.5
4,884,111	+				-2.0
4,884,112	-				-0.5
4,884,112	-				-2.2
4,884,112	-				-1.2
4,884,112	-				-1.3
4,884,112	-				-0.8
4,884,112	-				-1.9
4,884,112	-				-0.5
4,884,112	-				-2.4
4,884,112	-				-1.8
4,884,112	-				+0.1
4,884,112	-				-3.0
4,884,112	-				+0.9
4,884,114	+				-0.2
4,884,114	+				-1.0
4,884,114	+				-1.0
4,884,114	+				-2.6
4,884,114	+				+1.2
4,884,115	-				-1.9
4,884,115	-				-3.7
4,884,115	-				-1.8
4,884,115	-				-2.6
4,884,115	-				-0.8
4,884,115	-				-3.9
4,884,115	-				-1.0
4,884,152	-		QEN71_RS22015	0.11	+1.2
4,884,420	+		QEN71_RS22015	0.44	-1.9
4,884,420	+		QEN71_RS22015	0.44	-2.3
4,884,420	+		QEN71_RS22015	0.44	-1.0
4,884,420	+		QEN71_RS22015	0.44	-0.5
4,884,420	+		QEN71_RS22015	0.44	+0.0
4,884,421	-		QEN71_RS22015	0.44	-2.3
4,884,421	-		QEN71_RS22015	0.44	-1.4
4,884,421	-		QEN71_RS22015	0.44	-2.1
4,884,421	-		QEN71_RS22015	0.44	-1.9
4,884,579	+		QEN71_RS22015	0.63	-0.5
4,884,579	+		QEN71_RS22015	0.63	-0.2
4,884,579	+		QEN71_RS22015	0.63	-1.9
4,884,579	+		QEN71_RS22015	0.63	-2.3
4,884,579	+		QEN71_RS22015	0.63	-2.3
4,884,579	+		QEN71_RS22015	0.63	+1.3
4,884,579	+		QEN71_RS22015	0.63	-3.3
4,884,579	+		QEN71_RS22015	0.63	-0.0
4,884,579	+		QEN71_RS22015	0.63	-1.2
4,884,579	+		QEN71_RS22015	0.63	-0.3
4,884,579	+		QEN71_RS22015	0.63	-1.0
4,884,579	+		QEN71_RS22015	0.63	-1.2
4,884,579	+		QEN71_RS22015	0.63	-2.8
4,884,579	+		QEN71_RS22015	0.63	-0.2
4,884,579	+		QEN71_RS22015	0.63	-1.5
4,884,579	+		QEN71_RS22015	0.63	-1.3
4,884,579	+		QEN71_RS22015	0.63	-1.8
4,884,579	+		QEN71_RS22015	0.63	-0.7
4,884,579	+		QEN71_RS22015	0.63	-2.5
4,884,579	+		QEN71_RS22015	0.63	-2.9
4,884,579	+		QEN71_RS22015	0.63	-1.0
4,884,580	-		QEN71_RS22015	0.63	-1.0
4,884,580	-		QEN71_RS22015	0.63	-0.2
4,884,580	-		QEN71_RS22015	0.63	+0.1
4,884,580	-		QEN71_RS22015	0.63	-0.5
4,884,580	-		QEN71_RS22015	0.63	-2.0
4,884,580	-		QEN71_RS22015	0.63	-1.2
4,884,580	-		QEN71_RS22015	0.63	-3.6
4,884,580	-		QEN71_RS22015	0.63	-0.2
4,884,580	-		QEN71_RS22015	0.63	-1.2
4,884,580	-		QEN71_RS22015	0.63	-0.3
4,884,580	-		QEN71_RS22015	0.63	-2.1
4,884,580	-		QEN71_RS22015	0.63	-2.3
4,884,580	-		QEN71_RS22015	0.63	-3.3
4,884,580	-		QEN71_RS22015	0.63	-2.4
4,884,580	-		QEN71_RS22015	0.63	-0.2
4,884,580	-		QEN71_RS22015	0.63	-0.8
4,884,580	-		QEN71_RS22015	0.63	-0.8
4,884,582	-		QEN71_RS22015	0.63	-1.3
4,884,582	-		QEN71_RS22015	0.63	-1.0
4,884,582	-		QEN71_RS22015	0.63	-2.7
4,884,582	-		QEN71_RS22015	0.63	-1.3
4,884,582	-		QEN71_RS22015	0.63	-0.2
4,884,582	-		QEN71_RS22015	0.63	-1.6
4,884,642	+		QEN71_RS22015	0.70	-2.0
4,884,642	+		QEN71_RS22015	0.70	+1.8
4,884,642	+		QEN71_RS22015	0.70	-0.5
4,884,642	+		QEN71_RS22015	0.70	+0.2
4,884,642	+		QEN71_RS22015	0.70	-0.2
4,884,643	-		QEN71_RS22015	0.70	-0.9
4,884,915	+				-0.7
4,884,915	+				-0.9
4,884,916	-				+0.6
4,884,916	-				-0.8
4,884,916	-				+2.7
4,884,916	-				-0.8
4,884,994	+				-0.1
4,884,995	-				-1.9
4,884,995	-				-1.3
4,885,069	+		QEN71_RS22020	0.14	-0.2
4,885,069	+		QEN71_RS22020	0.14	+0.8
4,885,069	+		QEN71_RS22020	0.14	-1.5
4,885,069	+		QEN71_RS22020	0.14	+0.0
4,885,070	-		QEN71_RS22020	0.14	+0.2
4,885,070	-		QEN71_RS22020	0.14	+0.6
4,885,070	-		QEN71_RS22020	0.14	+0.8
4,885,070	-		QEN71_RS22020	0.14	+0.6
4,885,070	-		QEN71_RS22020	0.14	-0.8
4,885,174	+		QEN71_RS22020	0.23	-0.3
4,885,175	-		QEN71_RS22020	0.23	+0.9
4,885,175	-		QEN71_RS22020	0.23	-0.4
4,885,175	-		QEN71_RS22020	0.23	+0.6
4,885,175	-		QEN71_RS22020	0.23	-2.1
4,885,296	-		QEN71_RS22020	0.34	+0.7
4,885,296	-		QEN71_RS22020	0.34	-0.5
4,885,296	-		QEN71_RS22020	0.34	+0.3
4,885,296	-		QEN71_RS22020	0.34	-1.7
4,885,296	-		QEN71_RS22020	0.34	+0.1
4,885,296	-		QEN71_RS22020	0.34	-1.5
4,885,296	-		QEN71_RS22020	0.34	-0.5
4,885,462	+		QEN71_RS22020	0.48	-0.5
4,885,462	+		QEN71_RS22020	0.48	-1.2
4,885,462	+		QEN71_RS22020	0.48	+0.2
4,885,462	+		QEN71_RS22020	0.48	+0.8
4,885,462	+		QEN71_RS22020	0.48	+0.7
4,885,462	+		QEN71_RS22020	0.48	-0.3
4,885,463	-		QEN71_RS22020	0.48	-0.2
4,885,463	-		QEN71_RS22020	0.48	-0.0
4,885,463	-		QEN71_RS22020	0.48	-0.9
4,885,463	-		QEN71_RS22020	0.48	-1.0
4,885,463	-		QEN71_RS22020	0.48	-1.6
4,885,463	-		QEN71_RS22020	0.48	-0.6
4,885,627	+		QEN71_RS22020	0.63	+0.4
4,885,834	+		QEN71_RS22020	0.81	+0.1
4,885,834	+		QEN71_RS22020	0.81	-0.6
4,885,834	+		QEN71_RS22020	0.81	-1.2
4,885,834	+		QEN71_RS22020	0.81	-1.1
4,885,834	+		QEN71_RS22020	0.81	+0.4
4,885,834	+		QEN71_RS22020	0.81	+0.8
4,885,834	+		QEN71_RS22020	0.81	+0.3
4,885,834	+		QEN71_RS22020	0.81	-1.0
4,885,834	+		QEN71_RS22020	0.81	-1.4
4,885,834	+		QEN71_RS22020	0.81	-0.7
4,885,834	+		QEN71_RS22020	0.81	-0.3
4,885,834	+		QEN71_RS22020	0.81	-0.3
4,885,834	+		QEN71_RS22020	0.81	+0.2
4,885,834	+		QEN71_RS22020	0.81	-0.8
4,885,835	-		QEN71_RS22020	0.81	-1.8
4,885,835	-		QEN71_RS22020	0.81	+1.6
4,885,835	-		QEN71_RS22020	0.81	-0.3
4,885,835	-		QEN71_RS22020	0.81	-0.9
4,885,835	-		QEN71_RS22020	0.81	+0.1
4,885,835	-		QEN71_RS22020	0.81	-0.8
4,885,835	-		QEN71_RS22020	0.81	+0.6
4,885,835	-		QEN71_RS22020	0.81	-0.0
4,885,835	-		QEN71_RS22020	0.81	+0.6
4,885,835	-		QEN71_RS22020	0.81	-0.4
4,885,835	-		QEN71_RS22020	0.81	+0.0
4,885,835	-		QEN71_RS22020	0.81	-2.2
4,885,835	-		QEN71_RS22020	0.81	-0.5
4,885,837	+		QEN71_RS22020	0.81	-0.1
4,885,837	+		QEN71_RS22020	0.81	-1.1
4,885,837	+		QEN71_RS22020	0.81	-0.4
4,885,837	+		QEN71_RS22020	0.81	+0.2
4,885,838	-		QEN71_RS22020	0.81	+0.4
4,885,838	-		QEN71_RS22020	0.81	+0.6
4,885,838	-		QEN71_RS22020	0.81	+0.5
4,885,838	-		QEN71_RS22020	0.81	-0.3
4,885,838	-		QEN71_RS22020	0.81	+0.8
4,885,838	-		QEN71_RS22020	0.81	-0.6
4,885,838	-		QEN71_RS22020	0.81	-0.2
4,885,838	-		QEN71_RS22020	0.81	-1.3
4,885,838	-		QEN71_RS22020	0.81	+0.4