Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS21940

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
4,868,656	+		QEN71_RS21935	0.49	-0.2
4,868,842	+		QEN71_RS21935	0.60	-0.2
4,868,842	+		QEN71_RS21935	0.60	-0.2
4,868,842	+		QEN71_RS21935	0.60	-0.5
4,868,843	-		QEN71_RS21935	0.61	-0.8
4,868,875	+		QEN71_RS21935	0.62	-1.4
4,868,876	-		QEN71_RS21935	0.63	-2.1
4,868,876	-		QEN71_RS21935	0.63	-1.5
4,868,953	+		QEN71_RS21935	0.67	-0.2
4,868,953	+		QEN71_RS21935	0.67	-0.2
4,868,953	+		QEN71_RS21935	0.67	-1.5
4,868,954	-		QEN71_RS21935	0.67	-1.2
4,868,954	-		QEN71_RS21935	0.67	-3.5
4,868,954	-		QEN71_RS21935	0.67	-2.2
4,868,954	-		QEN71_RS21935	0.67	-1.0
4,869,234	+		QEN71_RS21935	0.85	-2.0
4,869,234	+		QEN71_RS21935	0.85	-1.5
4,869,293	-		QEN71_RS21935	0.88	-0.2
4,869,293	-		QEN71_RS21935	0.88	-1.2
4,869,293	-		QEN71_RS21935	0.88	-1.8
4,869,293	-		QEN71_RS21935	0.88	-2.2
4,869,293	-		QEN71_RS21935	0.88	-1.8
4,869,577	+				-0.2
4,869,577	+				-1.4
4,869,577	+				+1.8
4,869,577	+				-1.3
4,869,577	+				-1.0
4,869,577	+				+1.4
4,869,577	+				+1.1
4,869,577	+				+1.0
4,869,577	+				-0.8
4,869,577	+				+0.8
4,869,577	+				-1.6
4,869,578	-				+0.1
4,869,578	-				-0.0
4,869,578	-				-0.4
4,869,578	-				-0.3
4,869,578	-				-0.5
4,869,578	-				+1.8
4,869,578	-				+0.5
4,869,578	-				+1.2
4,869,578	-				-0.9
4,869,578	-				+0.5
4,869,578	-				-0.4
4,869,578	-				-0.9
4,869,578	-				-0.3
4,869,578	-				+1.5
4,869,611	+				-1.0
4,869,612	-				-0.3
4,870,106	+		QEN71_RS21940	0.77	+3.0
4,870,106	+		QEN71_RS21940	0.77	-2.8
4,870,106	+		QEN71_RS21940	0.77	-0.8
4,870,106	+		QEN71_RS21940	0.77	+0.5
4,870,106	+		QEN71_RS21940	0.77	-0.0
4,870,107	-		QEN71_RS21940	0.77	+0.9
4,870,107	-		QEN71_RS21940	0.77	+0.2
4,870,107	-		QEN71_RS21940	0.77	-0.1
4,870,107	-		QEN71_RS21940	0.77	+0.2
4,870,208	+				-0.2
4,870,272	+				+0.4
4,870,272	+				-1.6
4,870,272	+				-0.3
4,870,272	+				-0.1
4,870,272	+				+0.1
4,870,272	+				-2.9
4,870,272	+				-0.5
4,870,272	+				-0.7
4,870,272	+				-0.2
4,870,272	+				+0.4
4,870,273	-				-1.5
4,870,273	-				-0.4
4,870,273	-				-0.2
4,870,273	-				-0.8
4,870,273	-				-0.8
4,870,273	-				-0.6
4,870,273	-				+0.0
4,870,273	-				+0.7
4,870,273	-				+0.5
4,870,334	+		QEN71_RS21945	0.10	-1.0
4,870,334	+		QEN71_RS21945	0.10	-1.4
4,870,335	-		QEN71_RS21945	0.10	-1.0
4,870,335	-		QEN71_RS21945	0.10	+0.8
4,870,335	-		QEN71_RS21945	0.10	-0.6
4,870,335	-		QEN71_RS21945	0.10	+0.2
4,870,335	-		QEN71_RS21945	0.10	-1.0
4,870,436	+		QEN71_RS21945	0.24	+0.4
4,870,463	-		QEN71_RS21945	0.28	-0.8
4,870,531	+		QEN71_RS21945	0.38	-0.4
4,870,531	+		QEN71_RS21945	0.38	-0.2
4,870,532	-		QEN71_RS21945	0.38	-1.2
4,870,532	-		QEN71_RS21945	0.38	+2.2
4,870,532	-		QEN71_RS21945	0.38	+0.6
4,870,532	-		QEN71_RS21945	0.38	+0.4
4,870,532	-		QEN71_RS21945	0.38	+0.4
4,870,532	-		QEN71_RS21945	0.38	-0.9
4,870,533	+		QEN71_RS21945	0.38	-0.7
4,870,533	+		QEN71_RS21945	0.38	-0.1
4,870,533	+		QEN71_RS21945	0.38	-0.9
4,870,533	+		QEN71_RS21945	0.38	+0.8
4,870,533	+		QEN71_RS21945	0.38	-0.3
4,870,533	+		QEN71_RS21945	0.38	+1.5
4,870,533	+		QEN71_RS21945	0.38	+0.2
4,870,534	-		QEN71_RS21945	0.38	+0.8
4,870,534	-		QEN71_RS21945	0.38	-0.5
4,870,534	-		QEN71_RS21945	0.38	+1.3
4,870,534	-		QEN71_RS21945	0.38	+0.4
4,870,534	-		QEN71_RS21945	0.38	-1.0
4,870,534	-		QEN71_RS21945	0.38	+0.5
4,870,534	-		QEN71_RS21945	0.38	-0.3
4,870,534	-		QEN71_RS21945	0.38	+0.3
4,870,534	-		QEN71_RS21945	0.38	-0.3
4,870,534	-		QEN71_RS21945	0.38	+0.2
4,870,750	+		QEN71_RS21945	0.68	+0.4
4,870,750	+		QEN71_RS21945	0.68	+0.6
4,870,750	+		QEN71_RS21945	0.68	+0.3
4,870,750	+		QEN71_RS21945	0.68	-0.8
4,870,750	+		QEN71_RS21945	0.68	-0.4
4,870,750	+		QEN71_RS21945	0.68	+0.6
4,870,750	+		QEN71_RS21945	0.68	+0.6
4,870,750	+		QEN71_RS21945	0.68	+1.4
4,870,750	+		QEN71_RS21945	0.68	-1.4
4,870,750	+		QEN71_RS21945	0.68	-0.3
4,870,750	+		QEN71_RS21945	0.68	-0.1
4,870,750	+		QEN71_RS21945	0.68	+1.4
4,870,750	+		QEN71_RS21945	0.68	-1.0
4,870,750	+		QEN71_RS21945	0.68	+0.5
4,870,750	+		QEN71_RS21945	0.68	+0.4
4,870,751	-		QEN71_RS21945	0.68	+0.8
4,870,751	-		QEN71_RS21945	0.68	+0.5
4,870,751	-		QEN71_RS21945	0.68	-0.8
4,870,751	-		QEN71_RS21945	0.68	+0.0
4,870,751	-		QEN71_RS21945	0.68	+2.1
4,870,751	-		QEN71_RS21945	0.68	-0.3
4,870,751	-		QEN71_RS21945	0.68	-1.4
4,870,751	-		QEN71_RS21945	0.68	-0.5
4,870,751	-		QEN71_RS21945	0.68	-0.2
4,870,751	-		QEN71_RS21945	0.68	+1.8
4,870,751	-		QEN71_RS21945	0.68	-0.3
4,870,765	+		QEN71_RS21945	0.70	-0.2
4,870,765	+		QEN71_RS21945	0.70	+0.2
4,870,765	+		QEN71_RS21945	0.70	+0.8
4,870,765	+		QEN71_RS21945	0.70	-0.8
4,870,765	+		QEN71_RS21945	0.70	+1.3
4,870,766	-		QEN71_RS21945	0.70	-0.6
4,870,766	-		QEN71_RS21945	0.70	+0.3
4,870,766	-		QEN71_RS21945	0.70	-0.5
4,870,777	+		QEN71_RS21945	0.72	+0.2
4,870,777	+		QEN71_RS21945	0.72	+0.0
4,870,777	+		QEN71_RS21945	0.72	-0.6
4,870,778	-		QEN71_RS21945	0.72	-0.1
4,870,823	+		QEN71_RS21945	0.78	+0.2
4,870,823	+		QEN71_RS21945	0.78	-0.4
4,870,823	+		QEN71_RS21945	0.78	-0.5
4,870,823	+		QEN71_RS21945	0.78	-0.7
4,870,823	+		QEN71_RS21945	0.78	+0.5
4,870,824	-		QEN71_RS21945	0.78	-1.4
4,870,824	-		QEN71_RS21945	0.78	-2.3
4,870,824	-		QEN71_RS21945	0.78	-0.4
4,870,824	-		QEN71_RS21945	0.78	-0.8
4,870,824	-		QEN71_RS21945	0.78	+0.2
4,870,824	-		QEN71_RS21945	0.78	-0.4
4,870,875	+		QEN71_RS21945	0.85	+1.2
4,870,875	+		QEN71_RS21945	0.85	+0.2
4,870,876	-		QEN71_RS21945	0.85	-0.8
4,870,876	-		QEN71_RS21945	0.85	+0.7
4,870,876	-		QEN71_RS21945	0.85	-0.6
4,870,876	-		QEN71_RS21945	0.85	-0.7
4,870,925	+				-2.1
4,870,925	+				+0.1
4,870,926	-				-1.0
4,870,926	-				-1.0
4,871,013	+				+0.5
4,871,031	+				-0.1
4,871,094	+				+0.1
4,871,094	+				-2.7
4,871,094	+				-1.9
4,871,094	+				-0.3
4,871,095	-				-0.1
4,871,095	-				+2.2
4,871,119	+				-0.3
4,871,120	-				-1.2
4,871,129	+				-1.1
4,871,129	+				+0.1
4,871,129	+				+0.0
4,871,130	-				-0.2