Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS12510

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
2,801,324	+				-0.0
2,801,325	-				-0.8
2,801,374	+				-0.0
2,801,374	+				+0.7
2,801,374	+				-0.0
2,801,375	-				-2.0
2,801,380	+				+0.8
2,801,380	+				-0.7
2,801,380	+				-0.6
2,801,380	+				+0.2
2,801,380	+				+0.4
2,801,381	-				+0.0
2,801,381	-				-0.5
2,801,381	-				+0.3
2,801,381	-				+0.1
2,801,388	-				-1.5
2,801,393	+				+1.1
2,801,393	+				-1.6
2,801,393	+				-2.6
2,801,394	-				-1.3
2,801,394	-				-0.6
2,801,780	+		QEN71_RS12505	0.51	-0.1
2,801,780	+		QEN71_RS12505	0.51	-0.1
2,801,780	+		QEN71_RS12505	0.51	-0.8
2,801,813	+		QEN71_RS12505	0.56	+0.2
2,801,813	+		QEN71_RS12505	0.56	-0.4
2,801,813	+		QEN71_RS12505	0.56	+0.2
2,801,813	+		QEN71_RS12505	0.56	-1.3
2,801,813	+		QEN71_RS12505	0.56	-0.8
2,801,813	+		QEN71_RS12505	0.56	-0.9
2,801,814	-		QEN71_RS12505	0.56	-0.0
2,801,814	-		QEN71_RS12505	0.56	+0.7
2,801,814	-		QEN71_RS12505	0.56	+1.8
2,801,814	-		QEN71_RS12505	0.56	+0.5
2,801,879	+		QEN71_RS12505	0.64	-0.2
2,801,880	-		QEN71_RS12505	0.64	+0.0
2,801,880	-		QEN71_RS12505	0.64	-0.5
2,801,921	+		QEN71_RS12505	0.70	+0.4
2,801,921	+		QEN71_RS12505	0.70	-1.1
2,801,921	+		QEN71_RS12505	0.70	-0.1
2,801,921	+		QEN71_RS12505	0.70	-0.1
2,801,921	+		QEN71_RS12505	0.70	-0.5
2,801,921	+		QEN71_RS12505	0.70	-0.4
2,801,921	+		QEN71_RS12505	0.70	-0.3
2,801,921	+		QEN71_RS12505	0.70	+0.1
2,801,922	-		QEN71_RS12505	0.70	-0.5
2,801,922	-		QEN71_RS12505	0.70	-0.4
2,801,922	-		QEN71_RS12505	0.70	+0.7
2,802,144	+				-0.6
2,802,144	+				+1.2
2,802,144	+				-0.2
2,802,144	+				+0.1
2,802,144	+				-0.7
2,802,144	+				+0.4
2,802,144	+				+0.8
2,802,144	+				+0.2
2,802,144	+				-0.1
2,802,144	+				+1.3
2,802,144	+				-0.3
2,802,145	-				-0.7
2,802,145	-				-1.1
2,802,145	-				-2.3
2,802,145	-				-0.1
2,802,145	-				-0.0
2,802,145	-				+0.6
2,802,168	+				-1.8
2,802,230	+		QEN71_RS12510	0.24	-0.3
2,802,230	+		QEN71_RS12510	0.24	+0.2
2,802,230	+		QEN71_RS12510	0.24	-0.2
2,802,230	+		QEN71_RS12510	0.24	+0.8
2,802,230	+		QEN71_RS12510	0.24	-1.9
2,802,230	+		QEN71_RS12510	0.24	+0.3
2,802,230	+		QEN71_RS12510	0.24	+1.8
2,802,230	+		QEN71_RS12510	0.24	+0.0
2,802,230	+		QEN71_RS12510	0.24	+0.0
2,802,230	+		QEN71_RS12510	0.24	-0.8
2,802,230	+		QEN71_RS12510	0.24	+0.3
2,802,230	+		QEN71_RS12510	0.24	-0.4
2,802,230	+		QEN71_RS12510	0.24	+2.5
2,802,230	+		QEN71_RS12510	0.24	+0.3
2,802,230	+		QEN71_RS12510	0.24	-0.2
2,802,230	+		QEN71_RS12510	0.24	+0.2
2,802,230	+		QEN71_RS12510	0.24	+0.5
2,802,230	+		QEN71_RS12510	0.24	-1.2
2,802,230	+		QEN71_RS12510	0.24	-0.0
2,802,230	+		QEN71_RS12510	0.24	-1.1
2,802,230	+		QEN71_RS12510	0.24	-0.2
2,802,230	+		QEN71_RS12510	0.24	-0.9
2,802,230	+		QEN71_RS12510	0.24	-0.0
2,802,230	+		QEN71_RS12510	0.24	-0.8
2,802,230	+		QEN71_RS12510	0.24	+0.1
2,802,230	+		QEN71_RS12510	0.24	+0.4
2,802,230	+		QEN71_RS12510	0.24	-1.0
2,802,230	+		QEN71_RS12510	0.24	-0.8
2,802,230	+		QEN71_RS12510	0.24	-0.9
2,802,230	+		QEN71_RS12510	0.24	+1.1
2,802,231	-		QEN71_RS12510	0.25	+0.1
2,802,231	-		QEN71_RS12510	0.25	-0.2
2,802,231	-		QEN71_RS12510	0.25	-0.7
2,802,231	-		QEN71_RS12510	0.25	-4.0
2,802,231	-		QEN71_RS12510	0.25	-0.3
2,802,231	-		QEN71_RS12510	0.25	-2.2
2,802,231	-		QEN71_RS12510	0.25	-0.0
2,802,231	-		QEN71_RS12510	0.25	-0.7
2,802,231	-		QEN71_RS12510	0.25	+0.6
2,802,231	-		QEN71_RS12510	0.25	-0.8
2,802,231	-		QEN71_RS12510	0.25	-0.7
2,802,231	-		QEN71_RS12510	0.25	+0.1
2,802,231	-		QEN71_RS12510	0.25	-2.0
2,802,231	-		QEN71_RS12510	0.25	-0.1
2,802,231	-		QEN71_RS12510	0.25	-1.1
2,802,231	-		QEN71_RS12510	0.25	+0.5
2,802,231	-		QEN71_RS12510	0.25	-1.0
2,802,231	-		QEN71_RS12510	0.25	+0.8
2,802,231	-		QEN71_RS12510	0.25	-0.0
2,802,231	-		QEN71_RS12510	0.25	+0.6
2,802,231	-		QEN71_RS12510	0.25	+0.2
2,802,231	-		QEN71_RS12510	0.25	-0.2
2,802,231	-		QEN71_RS12510	0.25	-0.9
2,802,231	-		QEN71_RS12510	0.25	-0.6
2,802,231	-		QEN71_RS12510	0.25	-1.0
2,802,231	-		QEN71_RS12510	0.25	+0.2
2,802,231	-		QEN71_RS12510	0.25	-0.6
2,802,231	-		QEN71_RS12510	0.25	+1.1
2,802,231	-		QEN71_RS12510	0.25	+0.4
2,802,231	-		QEN71_RS12510	0.25	+0.7
2,802,278	+		QEN71_RS12510	0.46	-1.0
2,802,278	+		QEN71_RS12510	0.46	+0.0
2,802,278	+		QEN71_RS12510	0.46	+1.1
2,802,279	-		QEN71_RS12510	0.46	-1.0
2,802,279	-		QEN71_RS12510	0.46	+1.3
2,802,279	-		QEN71_RS12510	0.46	+0.5
2,802,279	-		QEN71_RS12510	0.46	-0.4
2,802,279	-		QEN71_RS12510	0.46	-0.8
2,802,279	-		QEN71_RS12510	0.46	-0.7
2,802,498	-				+0.9
2,802,515	+				+0.1
2,802,515	+				-0.9
2,802,515	+				-0.2
2,802,515	+				-0.3
2,802,515	+				-0.8
2,802,516	-				-0.0
2,802,516	-				+0.2
2,802,516	-				-0.5
2,802,516	-				-0.3
2,802,570	+				+0.2
2,802,570	+				-0.6
2,802,570	+				-0.0
2,802,570	+				-1.1
2,802,570	+				+0.2
2,802,570	+				-0.4
2,802,571	-				-0.7
2,802,571	-				+1.9
2,802,571	-				+0.3
2,802,571	-				+0.6
2,802,575	+				+1.5
2,802,575	+				+0.1
2,802,576	-				-0.0
2,802,576	-				-0.4
2,802,576	-				+0.2
2,802,576	-				+0.3
2,802,623	+				+0.0
2,802,623	+				+0.1
2,802,623	+				-0.3
2,802,623	+				+0.0
2,802,623	+				+1.1
2,802,623	+				-0.2
2,802,623	+				-0.4
2,802,623	+				-1.0
2,802,623	+				+0.4
2,802,623	+				-0.5
2,802,623	+				-0.2
2,802,624	-				+1.0
2,802,624	-				-0.5
2,802,624	-				-0.4
2,802,624	-				-0.2
2,802,624	-				+1.0
2,802,624	-				-0.2
2,802,624	-				-0.3
2,802,624	-				+1.1
2,802,624	-				-2.5
2,802,624	-				+0.6
2,802,874	+		QEN71_RS12515	0.39	-0.8
2,802,874	+		QEN71_RS12515	0.39	-0.5
2,803,089	+		QEN71_RS12515	0.74	-0.5
2,803,089	+		QEN71_RS12515	0.74	-0.2
2,803,089	+		QEN71_RS12515	0.74	+0.4
2,803,089	+		QEN71_RS12515	0.74	-0.5
2,803,089	+		QEN71_RS12515	0.74	+0.5
2,803,089	+		QEN71_RS12515	0.74	-0.0
2,803,089	+		QEN71_RS12515	0.74	+0.9
2,803,089	+		QEN71_RS12515	0.74	+0.2
2,803,089	+		QEN71_RS12515	0.74	-0.6
2,803,089	+		QEN71_RS12515	0.74	-0.1
2,803,089	+		QEN71_RS12515	0.74	-0.4
2,803,089	+		QEN71_RS12515	0.74	-1.6
2,803,089	+		QEN71_RS12515	0.74	+0.1
2,803,089	+		QEN71_RS12515	0.74	+0.3
2,803,089	+		QEN71_RS12515	0.74	-1.7
2,803,089	+		QEN71_RS12515	0.74	+0.7
2,803,089	+		QEN71_RS12515	0.74	-1.2
2,803,089	+		QEN71_RS12515	0.74	-0.5
2,803,089	+		QEN71_RS12515	0.74	+0.1
2,803,090	-		QEN71_RS12515	0.74	+0.7
2,803,090	-		QEN71_RS12515	0.74	-0.0
2,803,090	-		QEN71_RS12515	0.74	-0.4
2,803,090	-		QEN71_RS12515	0.74	-1.8
2,803,090	-		QEN71_RS12515	0.74	+0.3
2,803,090	-		QEN71_RS12515	0.74	+0.8
2,803,090	-		QEN71_RS12515	0.74	-0.0
2,803,090	-		QEN71_RS12515	0.74	+0.8
2,803,090	-		QEN71_RS12515	0.74	-0.3
2,803,090	-		QEN71_RS12515	0.74	+0.7
2,803,090	-		QEN71_RS12515	0.74	+0.6
2,803,090	-		QEN71_RS12515	0.74	-0.5
2,803,090	-		QEN71_RS12515	0.74	-0.9
2,803,090	-		QEN71_RS12515	0.74	-1.2
2,803,090	-		QEN71_RS12515	0.74	-0.1
2,803,090	-		QEN71_RS12515	0.74	+0.3
2,803,090	-		QEN71_RS12515	0.74	+0.1
2,803,090	-		QEN71_RS12515	0.74	+0.6
2,803,090	-		QEN71_RS12515	0.74	-1.8
2,803,090	-		QEN71_RS12515	0.74	-0.5
2,803,090	-		QEN71_RS12515	0.74	+0.8
2,803,090	-		QEN71_RS12515	0.74	-1.6
2,803,090	-		QEN71_RS12515	0.74	-0.0
2,803,091	+		QEN71_RS12515	0.74	-0.2
2,803,091	+		QEN71_RS12515	0.74	-0.8
2,803,091	+		QEN71_RS12515	0.74	+0.6
2,803,091	+		QEN71_RS12515	0.74	+2.0
2,803,091	+		QEN71_RS12515	0.74	+0.2
2,803,091	+		QEN71_RS12515	0.74	+0.0
2,803,091	+		QEN71_RS12515	0.74	+0.8
2,803,091	+		QEN71_RS12515	0.74	+0.3
2,803,091	+		QEN71_RS12515	0.74	+0.2
2,803,091	+		QEN71_RS12515	0.74	+0.7
2,803,091	+		QEN71_RS12515	0.74	+0.4
2,803,091	+		QEN71_RS12515	0.74	-0.7
2,803,091	+		QEN71_RS12515	0.74	-0.0
2,803,091	+		QEN71_RS12515	0.74	-0.4
2,803,091	+		QEN71_RS12515	0.74	-0.8
2,803,091	+		QEN71_RS12515	0.74	+1.9
2,803,091	+		QEN71_RS12515	0.74	-0.0
2,803,091	+		QEN71_RS12515	0.74	-0.0
2,803,091	+		QEN71_RS12515	0.74	+0.8
2,803,091	+		QEN71_RS12515	0.74	-0.2
2,803,091	+		QEN71_RS12515	0.74	-0.8
2,803,091	+		QEN71_RS12515	0.74	+0.1
2,803,091	+		QEN71_RS12515	0.74	-2.2
2,803,092	-		QEN71_RS12515	0.74	-1.4
2,803,092	-		QEN71_RS12515	0.74	+0.1
2,803,092	-		QEN71_RS12515	0.74	+0.1
2,803,092	-		QEN71_RS12515	0.74	-0.4
2,803,092	-		QEN71_RS12515	0.74	-0.3
2,803,092	-		QEN71_RS12515	0.74	-0.5
2,803,092	-		QEN71_RS12515	0.74	-0.8
2,803,092	-		QEN71_RS12515	0.74	-0.4
2,803,092	-		QEN71_RS12515	0.74	+1.2
2,803,092	-		QEN71_RS12515	0.74	+0.1
2,803,092	-		QEN71_RS12515	0.74	-0.1
2,803,092	-		QEN71_RS12515	0.74	-0.4
2,803,092	-		QEN71_RS12515	0.74	-0.1
2,803,092	-		QEN71_RS12515	0.74	-0.1
2,803,092	-		QEN71_RS12515	0.74	+0.3
2,803,092	-		QEN71_RS12515	0.74	-0.2
2,803,092	-		QEN71_RS12515	0.74	+1.3
2,803,092	-		QEN71_RS12515	0.74	+0.9
2,803,092	-		QEN71_RS12515	0.74	-0.0
2,803,092	-		QEN71_RS12515	0.74	-0.1
2,803,092	-		QEN71_RS12515	0.74	-0.0
2,803,092	-		QEN71_RS12515	0.74	-0.4
2,803,203	+				-0.7
2,803,203	+				+0.1
2,803,203	+				-0.5
2,803,203	+				-1.0
2,803,203	+				-0.2
2,803,204	-				-0.3
2,803,204	-				+0.6
2,803,341	+		QEN71_RS12520	0.30	-0.8
2,803,341	+		QEN71_RS12520	0.30	+0.5
2,803,341	+		QEN71_RS12520	0.30	+1.4
2,803,341	+		QEN71_RS12520	0.30	+0.2
2,803,341	+		QEN71_RS12520	0.30	+0.7
2,803,341	+		QEN71_RS12520	0.30	-0.9
2,803,342	-		QEN71_RS12520	0.30	+0.7
2,803,342	-		QEN71_RS12520	0.30	+0.9
2,803,342	-		QEN71_RS12520	0.30	-0.7
2,803,342	-		QEN71_RS12520	0.30	+0.2
2,803,371	+		QEN71_RS12520	0.37	-1.1
2,803,380	+		QEN71_RS12520	0.39	-0.1
2,803,381	-		QEN71_RS12520	0.39	-0.9