Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS09465

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
2,115,404	+		QEN71_RS09455	0.38	+0.3
2,115,404	+		QEN71_RS09455	0.38	-0.4
2,115,404	+		QEN71_RS09455	0.38	-0.1
2,115,405	-		QEN71_RS09455	0.38	-1.6
2,115,405	-		QEN71_RS09455	0.38	-1.5
2,115,405	-		QEN71_RS09455	0.38	+0.5
2,115,405	-		QEN71_RS09455	0.38	+1.2
2,115,546	+		QEN71_RS09455	0.75	-1.1
2,115,547	-		QEN71_RS09455	0.76	-0.1
2,115,549	-		QEN71_RS09455	0.76	-0.8
2,116,084	-		QEN71_RS09460	0.80	+1.0
2,116,167	+				-0.8
2,116,167	+				-0.1
2,116,168	-				-0.1
2,116,168	-				+0.2
2,116,168	-				+0.7
2,116,168	-				-0.6
2,116,212	+				-0.2
2,116,212	+				-0.5
2,116,212	+				-0.1
2,116,212	+				-0.6
2,116,212	+				-0.8
2,116,212	+				+1.2
2,116,212	+				-2.0
2,116,212	+				+0.4
2,116,212	+				+0.2
2,116,212	+				-0.3
2,116,213	-				+1.3
2,116,213	-				-0.0
2,116,213	-				-0.2
2,116,213	-				-0.2
2,116,213	-				-1.2
2,116,213	-				-0.4
2,116,213	-				+0.2
2,116,213	-				-0.2
2,116,213	-				+0.2
2,116,213	-				+0.2
2,116,213	-				-1.6
2,116,213	-				-0.5
2,116,213	-				-0.2
2,116,351	+				+0.2
2,116,351	+				-0.0
2,116,351	+				-0.1
2,116,351	+				-2.8
2,116,351	+				+0.2
2,116,351	+				+0.2
2,116,351	+				-0.0
2,116,351	+				-0.2
2,116,351	+				+0.5
2,116,352	-				+0.8
2,116,352	-				+0.2
2,116,352	-				+0.0
2,116,352	-				+1.4
2,116,352	-				-1.9
2,116,352	-				+0.9
2,116,352	-				-0.7
2,116,353	+				-0.7
2,116,353	+				-1.1
2,116,353	+				+1.1
2,116,354	-				+1.0
2,116,354	-				-0.9
2,116,354	-				+0.2
2,116,354	-				+0.5
2,116,354	-				-0.6
2,116,354	-				-0.6
2,116,354	-				-0.7
2,116,481	-				+0.6
2,116,834	+		QEN71_RS09465	0.13	-0.6
2,116,834	+		QEN71_RS09465	0.13	+0.5
2,116,834	+		QEN71_RS09465	0.13	+0.0
2,116,834	+		QEN71_RS09465	0.13	-0.1
2,116,834	+		QEN71_RS09465	0.13	+0.3
2,116,834	+		QEN71_RS09465	0.13	+0.2
2,116,835	-		QEN71_RS09465	0.13	-1.4
2,116,835	-		QEN71_RS09465	0.13	-2.1
2,116,922	-		QEN71_RS09465	0.15	-0.7
2,116,922	-		QEN71_RS09465	0.15	-1.2
2,116,922	-		QEN71_RS09465	0.15	-0.1
2,116,922	-		QEN71_RS09465	0.15	-1.8
2,117,388	+		QEN71_RS09465	0.25	-0.2
2,117,389	-		QEN71_RS09465	0.25	+0.4
2,117,389	-		QEN71_RS09465	0.25	+0.8
2,117,389	-		QEN71_RS09465	0.25	+0.8
2,117,389	-		QEN71_RS09465	0.25	-1.1
2,117,389	-		QEN71_RS09465	0.25	-1.8
2,117,404	+		QEN71_RS09465	0.25	-0.4
2,117,405	-		QEN71_RS09465	0.25	-0.4
2,117,405	-		QEN71_RS09465	0.25	+0.4
2,117,405	-		QEN71_RS09465	0.25	+0.2
2,117,425	+		QEN71_RS09465	0.25	-0.2
2,117,425	+		QEN71_RS09465	0.25	+0.2
2,117,482	-		QEN71_RS09465	0.27	-0.5
2,117,503	+		QEN71_RS09465	0.27	+0.1
2,117,503	+		QEN71_RS09465	0.27	+0.8
2,117,504	-		QEN71_RS09465	0.27	-0.2
2,117,504	-		QEN71_RS09465	0.27	+1.3
2,117,504	-		QEN71_RS09465	0.27	-0.1
2,117,504	-		QEN71_RS09465	0.27	-0.1
2,117,647	+		QEN71_RS09465	0.30	-0.2
2,117,719	+		QEN71_RS09465	0.32	+0.3
2,117,720	-		QEN71_RS09465	0.32	-0.4
2,117,721	+		QEN71_RS09465	0.32	-0.5
2,117,722	-		QEN71_RS09465	0.32	+0.3
2,117,722	-		QEN71_RS09465	0.32	+0.1
2,117,722	-		QEN71_RS09465	0.32	-0.8
2,117,722	-		QEN71_RS09465	0.32	-0.7
2,117,722	-		QEN71_RS09465	0.32	+0.5
2,117,815	+		QEN71_RS09465	0.34	-0.9
2,117,816	-		QEN71_RS09465	0.34	-1.2
2,117,816	-		QEN71_RS09465	0.34	+0.7
2,117,850	+		QEN71_RS09465	0.34	-0.2
2,117,854	+		QEN71_RS09465	0.35	+0.3
2,117,854	+		QEN71_RS09465	0.35	-0.2
2,117,854	+		QEN71_RS09465	0.35	+1.0
2,117,854	+		QEN71_RS09465	0.35	-0.4
2,117,854	+		QEN71_RS09465	0.35	+0.0
2,117,854	+		QEN71_RS09465	0.35	-0.2
2,117,854	+		QEN71_RS09465	0.35	-1.9
2,117,854	+		QEN71_RS09465	0.35	+0.8
2,117,854	+		QEN71_RS09465	0.35	+0.1
2,117,855	-		QEN71_RS09465	0.35	+0.8
2,117,855	-		QEN71_RS09465	0.35	-1.3
2,117,855	-		QEN71_RS09465	0.35	+1.1
2,117,855	-		QEN71_RS09465	0.35	-1.4
2,117,855	-		QEN71_RS09465	0.35	+0.5
2,117,855	-		QEN71_RS09465	0.35	+0.6
2,117,855	-		QEN71_RS09465	0.35	-0.4
2,117,860	+		QEN71_RS09465	0.35	-0.2
2,117,860	+		QEN71_RS09465	0.35	+0.2
2,117,860	+		QEN71_RS09465	0.35	+0.8
2,117,860	+		QEN71_RS09465	0.35	+1.2
2,117,860	+		QEN71_RS09465	0.35	-0.4
2,117,860	+		QEN71_RS09465	0.35	+0.8
2,117,861	-		QEN71_RS09465	0.35	-0.4
2,117,861	-		QEN71_RS09465	0.35	-2.2
2,117,861	-		QEN71_RS09465	0.35	-0.4
2,117,861	-		QEN71_RS09465	0.35	-0.3
2,117,861	-		QEN71_RS09465	0.35	+1.3
2,117,899	+		QEN71_RS09465	0.35	+0.8
2,117,917	+		QEN71_RS09465	0.36	+0.0
2,117,918	-		QEN71_RS09465	0.36	+0.5
2,117,918	-		QEN71_RS09465	0.36	+1.2
2,117,923	+		QEN71_RS09465	0.36	-2.1
2,117,924	-		QEN71_RS09465	0.36	+0.6
2,117,947	+		QEN71_RS09465	0.36	-0.4
2,117,947	+		QEN71_RS09465	0.36	-2.2
2,117,947	+		QEN71_RS09465	0.36	-0.1
2,117,948	-		QEN71_RS09465	0.36	+0.5
2,117,948	-		QEN71_RS09465	0.36	+0.1
2,117,950	-		QEN71_RS09465	0.37	-0.7
2,118,022	+		QEN71_RS09465	0.38	-2.4
2,118,036	+		QEN71_RS09465	0.38	+0.9
2,118,036	+		QEN71_RS09465	0.38	+0.2
2,118,037	-		QEN71_RS09465	0.38	-1.2
2,118,083	-		QEN71_RS09465	0.39	+0.8
2,118,083	-		QEN71_RS09465	0.39	-0.5
2,118,083	-		QEN71_RS09465	0.39	-0.2
2,118,118	+		QEN71_RS09465	0.40	+1.0
2,118,118	+		QEN71_RS09465	0.40	-0.2
2,118,119	-		QEN71_RS09465	0.40	-1.4
2,118,121	+		QEN71_RS09465	0.40	-0.1
2,118,121	+		QEN71_RS09465	0.40	-2.2
2,118,136	+		QEN71_RS09465	0.40	+0.1
2,118,136	+		QEN71_RS09465	0.40	-1.1
2,118,137	-		QEN71_RS09465	0.41	+0.7
2,118,142	+		QEN71_RS09465	0.41	+0.3
2,118,142	+		QEN71_RS09465	0.41	+0.2
2,118,181	+		QEN71_RS09465	0.41	+0.8
2,118,217	+		QEN71_RS09465	0.42	-0.5
2,118,218	-		QEN71_RS09465	0.42	+0.5
2,118,248	-		QEN71_RS09465	0.43	-0.1
2,118,299	+		QEN71_RS09465	0.44	-1.5
2,118,299	+		QEN71_RS09465	0.44	+0.1
2,118,300	-		QEN71_RS09465	0.44	+0.4
2,118,300	-		QEN71_RS09465	0.44	-0.8
2,118,300	-		QEN71_RS09465	0.44	+1.2
2,118,373	+		QEN71_RS09465	0.46	-0.6
2,118,373	+		QEN71_RS09465	0.46	+0.4
2,118,373	+		QEN71_RS09465	0.46	-0.2
2,118,373	+		QEN71_RS09465	0.46	+0.5
2,118,374	-		QEN71_RS09465	0.46	-0.2
2,118,430	+		QEN71_RS09465	0.47	+0.7
2,118,430	+		QEN71_RS09465	0.47	+0.4
2,118,430	+		QEN71_RS09465	0.47	+0.8
2,118,430	+		QEN71_RS09465	0.47	+0.4
2,118,431	-		QEN71_RS09465	0.47	+0.1
2,118,431	-		QEN71_RS09465	0.47	-3.1
2,118,431	-		QEN71_RS09465	0.47	-1.6
2,118,436	+		QEN71_RS09465	0.47	-0.6
2,118,436	+		QEN71_RS09465	0.47	+0.3
2,118,436	+		QEN71_RS09465	0.47	-1.4
2,118,436	+		QEN71_RS09465	0.47	-1.2
2,118,436	+		QEN71_RS09465	0.47	+0.3
2,118,436	+		QEN71_RS09465	0.47	-0.8
2,118,436	+		QEN71_RS09465	0.47	-0.1
2,118,437	-		QEN71_RS09465	0.47	-0.0
2,118,437	-		QEN71_RS09465	0.47	-0.2
2,118,437	-		QEN71_RS09465	0.47	+0.6
2,118,437	-		QEN71_RS09465	0.47	-1.2
2,118,499	+		QEN71_RS09465	0.48	-0.6
2,118,500	-		QEN71_RS09465	0.48	-0.2
2,118,526	+		QEN71_RS09465	0.49	-0.3
2,118,526	+		QEN71_RS09465	0.49	-2.5
2,118,527	-		QEN71_RS09465	0.49	+1.0
2,118,562	+		QEN71_RS09465	0.50	+0.1
2,118,562	+		QEN71_RS09465	0.50	+0.2
2,118,562	+		QEN71_RS09465	0.50	-0.2
2,118,563	-		QEN71_RS09465	0.50	+0.6
2,118,563	-		QEN71_RS09465	0.50	-2.1
2,118,563	-		QEN71_RS09465	0.50	+0.4
2,118,609	+		QEN71_RS09465	0.51	-0.1
2,118,609	+		QEN71_RS09465	0.51	-0.1
2,118,609	+		QEN71_RS09465	0.51	-0.4
2,118,609	+		QEN71_RS09465	0.51	+0.5
2,118,609	+		QEN71_RS09465	0.51	-0.2
2,118,609	+		QEN71_RS09465	0.51	+1.0
2,118,609	+		QEN71_RS09465	0.51	-1.4
2,118,609	+		QEN71_RS09465	0.51	+0.2
2,118,609	+		QEN71_RS09465	0.51	+0.8
2,118,609	+		QEN71_RS09465	0.51	-0.6
2,118,609	+		QEN71_RS09465	0.51	+0.2
2,118,609	+		QEN71_RS09465	0.51	-0.8
2,118,610	-		QEN71_RS09465	0.51	-0.5
2,118,610	-		QEN71_RS09465	0.51	-0.2
2,118,610	-		QEN71_RS09465	0.51	-0.7
2,118,610	-		QEN71_RS09465	0.51	-0.2
2,118,610	-		QEN71_RS09465	0.51	-0.7
2,118,610	-		QEN71_RS09465	0.51	+0.2
2,118,610	-		QEN71_RS09465	0.51	+0.1
2,118,610	-		QEN71_RS09465	0.51	+0.8
2,118,610	-		QEN71_RS09465	0.51	-1.9
2,118,610	-		QEN71_RS09465	0.51	-0.2
2,118,626	-		QEN71_RS09465	0.51	-0.4
2,118,626	-		QEN71_RS09465	0.51	-0.1
2,118,678	+		QEN71_RS09465	0.52	+0.2
2,118,678	+		QEN71_RS09465	0.52	+0.6
2,118,748	+		QEN71_RS09465	0.53	-0.2
2,118,862	+		QEN71_RS09465	0.56	+0.1
2,118,863	-		QEN71_RS09465	0.56	-1.0
2,118,863	-		QEN71_RS09465	0.56	-0.8
2,118,863	-		QEN71_RS09465	0.56	+0.2
2,118,863	-		QEN71_RS09465	0.56	+0.0
2,118,863	-		QEN71_RS09465	0.56	+0.3
2,118,874	+		QEN71_RS09465	0.56	+0.8
2,118,874	+		QEN71_RS09465	0.56	-2.3
2,118,875	-		QEN71_RS09465	0.56	-0.2
2,118,875	-		QEN71_RS09465	0.56	-0.9
2,118,875	-		QEN71_RS09465	0.56	-0.5
2,118,875	-		QEN71_RS09465	0.56	-0.5
2,118,932	-		QEN71_RS09465	0.57	+0.1
2,118,937	+		QEN71_RS09465	0.57	-1.1
2,118,937	+		QEN71_RS09465	0.57	+0.7
2,118,938	-		QEN71_RS09465	0.58	-0.3
2,119,000	+		QEN71_RS09465	0.59	+0.1
2,119,000	+		QEN71_RS09465	0.59	+0.3
2,119,060	+		QEN71_RS09465	0.60	+0.1
2,119,060	+		QEN71_RS09465	0.60	-0.1
2,119,061	-		QEN71_RS09465	0.60	-1.1
2,119,061	-		QEN71_RS09465	0.60	-1.1
2,119,120	+		QEN71_RS09465	0.61	-1.1
2,119,120	+		QEN71_RS09465	0.61	-0.6
2,119,120	+		QEN71_RS09465	0.61	+0.6
2,119,121	-		QEN71_RS09465	0.61	-0.6
2,119,121	-		QEN71_RS09465	0.61	-0.1
2,119,159	+		QEN71_RS09465	0.62	+1.3
2,119,159	+		QEN71_RS09465	0.62	+0.3
2,119,159	+		QEN71_RS09465	0.62	-0.8
2,119,159	+		QEN71_RS09465	0.62	-0.5
2,119,186	+		QEN71_RS09465	0.63	-0.8
2,119,186	+		QEN71_RS09465	0.63	-0.8
2,119,186	+		QEN71_RS09465	0.63	+0.7
2,119,186	+		QEN71_RS09465	0.63	-2.3
2,119,186	+		QEN71_RS09465	0.63	-1.2
2,119,186	+		QEN71_RS09465	0.63	+0.5
2,119,186	+		QEN71_RS09465	0.63	-0.2
2,119,186	+		QEN71_RS09465	0.63	-0.4
2,119,186	+		QEN71_RS09465	0.63	-0.3
2,119,187	-		QEN71_RS09465	0.63	-0.8
2,119,187	-		QEN71_RS09465	0.63	+0.9
2,119,187	-		QEN71_RS09465	0.63	-0.5
2,119,187	-		QEN71_RS09465	0.63	-0.4
2,119,187	-		QEN71_RS09465	0.63	-0.2
2,119,187	-		QEN71_RS09465	0.63	-0.1
2,119,187	-		QEN71_RS09465	0.63	+0.2
2,119,187	-		QEN71_RS09465	0.63	+0.7
2,119,187	-		QEN71_RS09465	0.63	-0.5
2,119,187	-		QEN71_RS09465	0.63	+0.5
2,119,187	-		QEN71_RS09465	0.63	+0.2
2,119,187	-		QEN71_RS09465	0.63	+0.3
2,119,187	-		QEN71_RS09465	0.63	+0.4
2,119,187	-		QEN71_RS09465	0.63	-0.5
2,119,187	-		QEN71_RS09465	0.63	+0.2
2,119,190	+		QEN71_RS09465	0.63	-1.9
2,119,190	+		QEN71_RS09465	0.63	+0.5
2,119,190	+		QEN71_RS09465	0.63	-0.0
2,119,190	+		QEN71_RS09465	0.63	-0.2
2,119,191	-		QEN71_RS09465	0.63	+0.2
2,119,191	-		QEN71_RS09465	0.63	-1.0
2,119,191	-		QEN71_RS09465	0.63	+0.0
2,119,205	-		QEN71_RS09465	0.63	-0.8
2,119,270	+		QEN71_RS09465	0.65	-0.9
2,119,270	+		QEN71_RS09465	0.65	-0.8
2,119,270	+		QEN71_RS09465	0.65	-0.4
2,119,393	+		QEN71_RS09465	0.67	-1.1
2,119,393	+		QEN71_RS09465	0.67	+0.2
2,119,393	+		QEN71_RS09465	0.67	-0.2
2,119,393	+		QEN71_RS09465	0.67	-0.8
2,119,393	+		QEN71_RS09465	0.67	-1.1
2,119,394	-		QEN71_RS09465	0.67	-0.0
2,119,468	+		QEN71_RS09465	0.69	-0.2
2,119,531	+		QEN71_RS09465	0.70	-0.4
2,119,531	+		QEN71_RS09465	0.70	+0.4
2,119,532	-		QEN71_RS09465	0.70	+0.3
2,119,537	+		QEN71_RS09465	0.70	-0.9
2,119,538	-		QEN71_RS09465	0.70	-2.2
2,119,636	-		QEN71_RS09465	0.72	-0.2
2,119,693	-		QEN71_RS09465	0.74	-1.2
2,119,700	+		QEN71_RS09465	0.74	-0.2
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2,119,701	-		QEN71_RS09465	0.74	+0.2
2,119,708	+		QEN71_RS09465	0.74	+0.4
2,119,709	-		QEN71_RS09465	0.74	-0.5
2,119,729	+		QEN71_RS09465	0.74	-1.3
2,119,783	+		QEN71_RS09465	0.75	-0.2
2,119,783	+		QEN71_RS09465	0.75	+1.2
2,119,784	-		QEN71_RS09465	0.75	-0.2
2,119,861	+		QEN71_RS09465	0.77	+0.5
2,119,862	-		QEN71_RS09465	0.77	+0.3
2,119,862	-		QEN71_RS09465	0.77	+0.2
2,120,011	+		QEN71_RS09465	0.80	-0.6
2,120,011	+		QEN71_RS09465	0.80	-0.1
2,120,012	-		QEN71_RS09465	0.80	-1.8
2,120,012	-		QEN71_RS09465	0.80	-0.7
2,120,134	+		QEN71_RS09465	0.83	+0.1
2,120,206	+		QEN71_RS09465	0.84	+0.4
2,120,206	+		QEN71_RS09465	0.84	-1.1
2,120,206	+		QEN71_RS09465	0.84	+0.3
2,120,206	+		QEN71_RS09465	0.84	-0.2
2,120,206	+		QEN71_RS09465	0.84	+0.4
2,120,206	+		QEN71_RS09465	0.84	-0.7
2,120,207	-		QEN71_RS09465	0.84	+0.2
2,120,207	-		QEN71_RS09465	0.84	-1.9
2,120,207	-		QEN71_RS09465	0.84	-1.7
2,120,207	-		QEN71_RS09465	0.84	-0.6
2,120,207	-		QEN71_RS09465	0.84	-0.6
2,120,207	-		QEN71_RS09465	0.84	+0.4
2,120,207	-		QEN71_RS09465	0.84	+0.0
2,120,254	-		QEN71_RS09465	0.85	+0.1
2,120,254	-		QEN71_RS09465	0.85	+0.0
2,120,326	+		QEN71_RS09465	0.87	+0.8
2,120,341	+		QEN71_RS09465	0.87	+0.8
2,120,341	+		QEN71_RS09465	0.87	+0.2
2,120,344	+		QEN71_RS09465	0.87	-0.2
2,120,344	+		QEN71_RS09465	0.87	+0.0
2,120,344	+		QEN71_RS09465	0.87	+0.8
2,120,344	+		QEN71_RS09465	0.87	-1.1
2,120,345	-		QEN71_RS09465	0.87	+1.2
2,120,345	-		QEN71_RS09465	0.87	+0.9
2,120,366	-		QEN71_RS09465	0.88	+0.0
2,120,416	+		QEN71_RS09465	0.89	-0.1
2,120,416	+		QEN71_RS09465	0.89	-0.4
2,120,563	+				-0.4
2,120,564	-				+0.4
2,120,564	-				-0.6
2,120,564	-				-2.2
2,120,564	-				+1.3
2,120,581	+				+1.3
2,120,582	-				+0.1
2,120,617	+				-0.9
2,120,618	-				+2.2
2,120,618	-				-0.5
2,120,626	+				-0.1
2,120,626	+				-0.2
2,120,627	-				-0.1
2,120,743	-				-2.8
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2,120,777	-				-0.5
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2,120,794	-				+0.8
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2,120,829	+				-0.2
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2,120,830	-				-0.8
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2,120,860	+				-1.1
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2,120,881	+				-0.9
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2,120,882	-				-0.5
2,120,882	-				+0.3
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2,120,922	+				+0.0
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2,121,190	+		QEN71_RS09470	0.74	-3.6
2,121,212	-		QEN71_RS09470	0.81	-2.1
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2,121,571	+		QEN71_RS09475	0.51	+0.1
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2,121,607	-		QEN71_RS09475	0.63	-0.5
2,121,607	-		QEN71_RS09475	0.63	-1.3
2,121,607	-		QEN71_RS09475	0.63	-0.6
2,121,651	+		QEN71_RS09475	0.76	-0.8
2,121,651	+		QEN71_RS09475	0.76	-1.4
2,121,651	+		QEN71_RS09475	0.76	+0.0
2,121,651	+		QEN71_RS09475	0.76	+1.1
2,121,651	+		QEN71_RS09475	0.76	+0.4
2,121,651	+		QEN71_RS09475	0.76	+0.3
2,121,651	+		QEN71_RS09475	0.76	+0.1
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2,121,652	-		QEN71_RS09475	0.77	-0.1
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2,121,745	+				-0.9
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2,121,754	-				-0.4
2,121,754	-				-1.7
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2,121,754	-				-1.1
2,121,754	-				-0.2
2,121,754	-				-0.5
2,121,769	+				-0.1
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2,121,770	-				+0.3
2,121,796	-				-0.6
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2,121,855	-				-2.8
2,121,855	-				+0.3
2,121,855	-				-0.2
2,121,855	-				+0.6
2,121,855	-				-1.8