Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS07935

Experiment: Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Oryza_sativa; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
1,757,884	+		QEN71_RS07930	0.40	-0.7
1,757,884	+		QEN71_RS07930	0.40	-0.2
1,757,884	+		QEN71_RS07930	0.40	-0.2
1,757,884	+		QEN71_RS07930	0.40	+2.3
1,757,885	-		QEN71_RS07930	0.40	+0.2
1,757,885	-		QEN71_RS07930	0.40	-0.9
1,757,885	-		QEN71_RS07930	0.40	+0.2
1,757,920	-		QEN71_RS07930	0.43	-0.6
1,757,931	-		QEN71_RS07930	0.44	-0.2
1,757,931	-		QEN71_RS07930	0.44	-0.3
1,757,931	-		QEN71_RS07930	0.44	-0.5
1,758,016	+		QEN71_RS07930	0.49	+0.3
1,758,016	+		QEN71_RS07930	0.49	+0.2
1,758,016	+		QEN71_RS07930	0.49	-0.6
1,758,017	-		QEN71_RS07930	0.49	+0.0
1,758,017	-		QEN71_RS07930	0.49	-0.6
1,758,017	-		QEN71_RS07930	0.49	-0.4
1,758,017	-		QEN71_RS07930	0.49	-0.0
1,758,017	-		QEN71_RS07930	0.49	+1.0
1,758,017	-		QEN71_RS07930	0.49	+0.3
1,758,017	-		QEN71_RS07930	0.49	+1.0
1,758,017	-		QEN71_RS07930	0.49	+0.2
1,758,158	-		QEN71_RS07930	0.59	-0.0
1,758,158	-		QEN71_RS07930	0.59	-0.3
1,758,247	+		QEN71_RS07930	0.64	+0.6
1,758,336	+		QEN71_RS07930	0.70	-0.2
1,758,337	-		QEN71_RS07930	0.70	-0.0
1,758,346	+		QEN71_RS07930	0.71	+0.2
1,758,519	+		QEN71_RS07930	0.83	-0.1
1,758,519	+		QEN71_RS07930	0.83	-1.0
1,758,519	+		QEN71_RS07930	0.83	-0.8
1,758,519	+		QEN71_RS07930	0.83	+0.3
1,758,519	+		QEN71_RS07930	0.83	-0.3
1,758,557	-		QEN71_RS07930	0.85	-0.3
1,758,557	-		QEN71_RS07930	0.85	-1.7
1,758,589	+		QEN71_RS07930	0.87	+1.3
1,758,589	+		QEN71_RS07930	0.87	-2.0
1,758,589	+		QEN71_RS07930	0.87	+1.0
1,758,590	-		QEN71_RS07930	0.87	-0.8
1,758,590	-		QEN71_RS07930	0.87	-0.0
1,758,590	-		QEN71_RS07930	0.87	-0.2
1,758,590	-		QEN71_RS07930	0.87	-0.9
1,758,818	-				+0.1
1,758,818	-				+0.3
1,758,821	+				+0.8
1,758,834	-				-0.1
1,758,839	-				-1.9
1,758,864	+				-0.0
1,758,864	+				+0.3
1,758,864	+				-0.4
1,758,864	+				+0.6
1,758,864	+				+0.4
1,758,864	+				-0.4
1,758,864	+				+0.7
1,758,865	-				-0.2
1,758,865	-				-0.5
1,759,127	+		QEN71_RS07935	0.35	-0.0
1,759,127	+		QEN71_RS07935	0.35	-0.8
1,759,127	+		QEN71_RS07935	0.35	-1.2
1,759,127	+		QEN71_RS07935	0.35	-0.8
1,759,127	+		QEN71_RS07935	0.35	-0.5
1,759,127	+		QEN71_RS07935	0.35	-0.5
1,759,127	+		QEN71_RS07935	0.35	-1.4
1,759,127	+		QEN71_RS07935	0.35	-1.7
1,759,127	+		QEN71_RS07935	0.35	-0.5
1,759,127	+		QEN71_RS07935	0.35	+0.0
1,759,127	+		QEN71_RS07935	0.35	-1.0
1,759,128	-		QEN71_RS07935	0.35	-0.1
1,759,128	-		QEN71_RS07935	0.35	-0.1
1,759,128	-		QEN71_RS07935	0.35	+0.5
1,759,128	-		QEN71_RS07935	0.35	-0.5
1,759,128	-		QEN71_RS07935	0.35	-1.8
1,759,128	-		QEN71_RS07935	0.35	-0.7
1,759,128	-		QEN71_RS07935	0.35	-0.7
1,759,128	-		QEN71_RS07935	0.35	-0.3
1,759,130	+		QEN71_RS07935	0.35	-1.0
1,759,130	+		QEN71_RS07935	0.35	-0.5
1,759,131	-		QEN71_RS07935	0.36	-0.5
1,759,286	+		QEN71_RS07935	0.57	+0.7
1,759,397	+		QEN71_RS07935	0.72	-0.1
1,759,397	+		QEN71_RS07935	0.72	-0.6
1,759,397	+		QEN71_RS07935	0.72	-1.4
1,759,397	+		QEN71_RS07935	0.72	-0.6
1,759,397	+		QEN71_RS07935	0.72	-0.5
1,759,397	+		QEN71_RS07935	0.72	-1.0
1,759,397	+		QEN71_RS07935	0.72	-1.0
1,759,397	+		QEN71_RS07935	0.72	-0.4
1,759,398	-		QEN71_RS07935	0.72	-0.1
1,759,604	+				-0.7
1,759,604	+				-0.6
1,759,604	+				+0.1
1,759,604	+				-0.8
1,759,605	-				+2.0
1,759,605	-				-0.8
1,759,651	+				-1.0
1,759,652	-				-0.4
1,759,739	+				-0.7
1,759,739	+				-0.1
1,759,739	+				-1.0
1,759,739	+				-0.4
1,759,739	+				-0.5
1,759,740	-				+1.1
1,759,740	-				+0.2
1,759,740	-				+0.8
1,759,740	-				+1.5
1,759,740	-				+0.2
1,759,740	-				-1.9
1,759,740	-				+0.1
1,759,740	-				-0.5
1,759,740	-				-1.2
1,759,878	+				-0.1
1,759,878	+				-0.3
1,759,878	+				+1.1
1,759,878	+				-0.0
1,759,878	+				-1.6
1,759,878	+				-0.3
1,759,878	+				+0.8
1,759,878	+				-0.0
1,759,878	+				-0.6
1,759,878	+				+0.1
1,759,879	-				+0.4
1,759,879	-				+0.8
1,759,879	-				+0.9
1,759,917	-				+0.7
1,759,928	+				-0.5
1,759,928	+				-0.3
1,759,928	+				-0.1
1,759,928	+				-1.5
1,759,928	+				+0.6
1,759,928	+				-0.2
1,759,928	+				-0.8
1,759,929	-				-0.4
1,759,929	-				-1.4
1,759,929	-				-2.6
1,759,977	+				-0.6
1,759,977	+				-1.1
1,759,977	+				-0.7
1,759,978	-				+0.1
1,759,978	-				+0.1
1,759,989	+				-1.0
1,759,989	+				-0.7
1,759,990	-				-0.2
1,759,990	-				+0.3
1,759,990	-				+0.7
1,759,990	-				-0.8
1,759,990	-				-2.2
1,759,990	-				+1.6
1,760,015	-				+0.2
1,760,033	+				-0.3
1,760,033	+				-0.1
1,760,033	+				+0.4
1,760,033	+				-0.5
1,760,033	+				-2.5
1,760,033	+				-0.3
1,760,034	-				+0.0
1,760,034	-				-0.6
1,760,034	-				-0.0
1,760,053	+		QEN71_RS07940	0.12	-1.2
1,760,053	+		QEN71_RS07940	0.12	+0.4
1,760,053	+		QEN71_RS07940	0.12	+0.0
1,760,054	-		QEN71_RS07940	0.13	-1.4
1,760,054	-		QEN71_RS07940	0.13	+0.6
1,760,054	-		QEN71_RS07940	0.13	+0.8
1,760,054	-		QEN71_RS07940	0.13	+0.3
1,760,054	-		QEN71_RS07940	0.13	-0.9
1,760,250	+		QEN71_RS07940	0.55	+2.1
1,760,251	-		QEN71_RS07940	0.55	+0.1
1,760,251	-		QEN71_RS07940	0.55	+0.8
1,760,251	-		QEN71_RS07940	0.55	-0.6
1,760,431	+				-1.4
1,760,432	-				-0.7