Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04191

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
50,117	-				-0.1
50,132	+		MIT1002_04189	0.11	+0.6
50,156	+		MIT1002_04189	0.17	-0.3
50,175	+		MIT1002_04189	0.22	+0.2
50,175	+		MIT1002_04189	0.22	+11.0
50,180	+		MIT1002_04189	0.24	-1.7
50,180	+		MIT1002_04189	0.24	+0.2
50,183	-		MIT1002_04189	0.24	+0.8
50,216	+		MIT1002_04189	0.33	+0.0
50,269	-		MIT1002_04189	0.47	-0.7
50,314	-		MIT1002_04189	0.59	+0.5
50,314	-		MIT1002_04189	0.59	+0.2
50,314	-		MIT1002_04189	0.59	-0.6
50,428	-		MIT1002_04189	0.88	-1.1
50,438	-				+0.5
50,522	+				-1.2
50,522	+				-1.8
50,522	+				+0.6
50,522	+				-0.1
50,522	+				-1.0
50,522	+				-0.2
50,522	+				-0.5
50,530	-				+0.7
50,530	-				-1.0
50,530	-				-0.9
50,532	+				+0.1
50,555	+				+1.0
50,609	-				-1.3
50,623	+				+1.7
50,642	+		MIT1002_04190	0.14	+0.7
50,642	+		MIT1002_04190	0.14	+1.0
50,666	-		MIT1002_04190	0.22	-0.1
50,923	+				-1.1
50,954	+				-0.9
50,956	+				+0.4
51,034	+				+0.8
51,081	+				+0.9
51,241	+		MIT1002_04191	0.25	+2.5
51,256	+		MIT1002_04191	0.28	-0.5
51,256	+		MIT1002_04191	0.28	-0.2
51,264	-		MIT1002_04191	0.30	-1.2
51,282	+		MIT1002_04191	0.33	-0.3
51,404	-		MIT1002_04191	0.56	-0.0
51,447	-		MIT1002_04191	0.64	+0.1
51,546	+		MIT1002_04191	0.83	+0.0
51,546	+		MIT1002_04191	0.83	-0.1
51,554	-		MIT1002_04191	0.84	-0.2
51,554	-		MIT1002_04191	0.84	-0.8
51,603	+				+1.2
51,610	+				-0.7
51,642	+				-0.6
51,642	+				+0.5
51,685	-				-0.5
51,727	+				+1.8
51,760	-				+0.3
51,794	+				+0.3
51,802	-				+0.1
51,824	+				-0.2
51,836	+				+0.5
51,836	+				+0.1
51,844	-				-1.0
51,915	+				+3.5
51,923	-				-0.0
52,024	-				+0.1
52,070	+				+0.2
52,071	+				+1.1
52,132	-				-0.2
52,132	-				-1.2
52,132	-				+1.6
52,160	-				+2.0
52,356	+		MIT1002_04192	0.48	+0.1
52,357	-		MIT1002_04192	0.48	-0.5
52,371	+		MIT1002_04192	0.52	+0.3
52,454	-		MIT1002_04192	0.75	+1.1
52,454	-		MIT1002_04192	0.75	-0.3
52,484	-		MIT1002_04192	0.83	-0.3
52,491	+		MIT1002_04192	0.85	-0.1
52,575	-				+1.2