Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03286

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
3,660,937	+		MIT1002_03285	0.60	+0.5
3,660,945	-		MIT1002_03285	0.61	+0.3
3,660,960	+		MIT1002_03285	0.62	+0.8
3,660,969	-		MIT1002_03285	0.62	+0.5
3,660,976	+		MIT1002_03285	0.62	-2.5
3,661,016	+		MIT1002_03285	0.65	-0.3
3,661,019	-		MIT1002_03285	0.65	-0.3
3,661,024	-		MIT1002_03285	0.65	+0.3
3,661,024	-		MIT1002_03285	0.65	-1.4
3,661,024	-		MIT1002_03285	0.65	+0.0
3,661,026	+		MIT1002_03285	0.65	+1.1
3,661,055	-		MIT1002_03285	0.67	-0.4
3,661,156	+		MIT1002_03285	0.72	+1.1
3,661,181	-		MIT1002_03285	0.73	+0.0
3,661,220	+		MIT1002_03285	0.76	-0.2
3,661,267	-		MIT1002_03285	0.78	+1.3
3,661,323	-		MIT1002_03285	0.81	-0.4
3,661,323	-		MIT1002_03285	0.81	-0.9
3,661,376	-		MIT1002_03285	0.84	+1.9
3,661,413	+		MIT1002_03285	0.86	+1.0
3,661,413	+		MIT1002_03285	0.86	-0.2
3,661,413	+		MIT1002_03285	0.86	-1.2
3,661,413	+		MIT1002_03285	0.86	+0.8
3,661,447	+		MIT1002_03285	0.88	-0.2
3,661,471	+		MIT1002_03285	0.89	+0.3
3,661,479	-		MIT1002_03285	0.89	-1.3
3,661,494	-				+0.6
3,661,598	-				+0.7
3,661,617	+				-0.9
3,661,617	+				-0.3
3,661,624	+				-0.5
3,661,694	+				-0.5
3,661,791	+				-0.4
3,661,811	-				-1.8
3,661,844	+				+0.7
3,661,859	-				-0.6
3,661,991	+				-0.2
3,662,021	+		MIT1002_03286	0.11	-0.4
3,662,027	+		MIT1002_03286	0.11	+0.2
3,662,029	+		MIT1002_03286	0.12	+0.5
3,662,029	+		MIT1002_03286	0.12	-0.1
3,662,040	-		MIT1002_03286	0.13	-0.4
3,662,060	-		MIT1002_03286	0.15	+1.1
3,662,089	-		MIT1002_03286	0.18	-0.3
3,662,106	-		MIT1002_03286	0.20	+0.7
3,662,124	+		MIT1002_03286	0.22	-1.5
3,662,178	-		MIT1002_03286	0.28	+0.4
3,662,178	-		MIT1002_03286	0.28	-0.1
3,662,191	+		MIT1002_03286	0.29	-0.1
3,662,206	+		MIT1002_03286	0.31	+1.0
3,662,207	-		MIT1002_03286	0.31	+0.3
3,662,240	-		MIT1002_03286	0.34	-0.8
3,662,240	-		MIT1002_03286	0.34	+0.3
3,662,240	-		MIT1002_03286	0.34	-0.8
3,662,240	-		MIT1002_03286	0.34	-0.2
3,662,241	-		MIT1002_03286	0.35	+0.9
3,662,254	+		MIT1002_03286	0.36	-1.9
3,662,326	+		MIT1002_03286	0.44	-0.0
3,662,336	-		MIT1002_03286	0.45	-0.4
3,662,409	+		MIT1002_03286	0.53	+1.3
3,662,437	-		MIT1002_03286	0.56	+0.5
3,662,461	-		MIT1002_03286	0.58	-0.5
3,662,548	+		MIT1002_03286	0.68	+0.5
3,662,548	+		MIT1002_03286	0.68	-0.4
3,662,548	+		MIT1002_03286	0.68	+1.1
3,662,598	-		MIT1002_03286	0.73	-0.8
3,662,642	+		MIT1002_03286	0.78	-0.4
3,662,689	-		MIT1002_03286	0.83	+0.6
3,662,728	-		MIT1002_03286	0.87	-1.8
3,662,771	+				+1.1
3,662,771	+				-1.1
3,662,771	+				+0.5
3,662,779	-				-0.9
3,662,779	-				+1.0
3,662,786	-				-0.5
3,662,838	+				+1.1
3,663,016	+		MIT1002_03287	0.22	-0.8
3,663,024	-		MIT1002_03287	0.24	-0.1
3,663,169	-		MIT1002_03287	0.43	-1.5
3,663,176	+		MIT1002_03287	0.44	-0.4
3,663,204	-		MIT1002_03287	0.47	-1.2
3,663,340	+		MIT1002_03287	0.65	+0.1
3,663,371	-		MIT1002_03287	0.69	-0.1
3,663,402	+		MIT1002_03287	0.74	-0.0
3,663,404	+		MIT1002_03287	0.74	-1.8
3,663,419	-		MIT1002_03287	0.76	-0.2
3,663,455	-		MIT1002_03287	0.81	-0.1
3,663,472	+		MIT1002_03287	0.83	+0.6
3,663,472	+		MIT1002_03287	0.83	-0.7
3,663,474	+		MIT1002_03287	0.83	-0.1
3,663,633	+				+1.8
3,663,723	+		MIT1002_03288	0.31	+0.1
3,663,772	+		MIT1002_03288	0.44	-1.4
3,663,772	+		MIT1002_03288	0.44	-0.4
3,663,772	+		MIT1002_03288	0.44	-0.3
3,663,780	-		MIT1002_03288	0.46	-0.2
3,663,787	+		MIT1002_03288	0.48	-0.3
3,663,823	-		MIT1002_03288	0.57	-0.3