Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03264

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
3,634,583	+		MIT1002_03262	0.47	-0.3
3,634,591	-		MIT1002_03262	0.49	+1.3
3,634,677	-		MIT1002_03262	0.70	+0.0
3,634,699	-		MIT1002_03262	0.75	+0.9
3,634,706	-		MIT1002_03262	0.76	-0.3
3,634,769	-				+1.9
3,634,894	+				+1.4
3,634,894	+				-0.4
3,634,904	+				-1.7
3,634,917	-				-0.9
3,634,990	-				+1.8
3,635,016	+				-0.4
3,635,052	+				+0.3
3,635,170	+		MIT1002_03263	0.67	+0.9
3,635,170	+		MIT1002_03263	0.67	-0.5
3,635,170	+		MIT1002_03263	0.67	+1.7
3,635,178	-		MIT1002_03263	0.71	-1.4
3,635,225	-				+0.3
3,635,249	+				+0.5
3,635,257	-				+0.5
3,635,399	-				-1.5
3,635,480	+				+0.4
3,635,498	-				+1.2
3,635,534	+				-0.3
3,635,572	+				-0.9
3,635,616	-		MIT1002_03264	0.11	+0.2
3,635,619	+		MIT1002_03264	0.12	+1.3
3,635,644	-		MIT1002_03264	0.14	-0.7
3,635,661	+		MIT1002_03264	0.16	+0.2
3,635,691	+		MIT1002_03264	0.20	-0.2
3,635,691	+		MIT1002_03264	0.20	-0.7
3,635,699	-		MIT1002_03264	0.21	+0.0
3,635,699	-		MIT1002_03264	0.21	-0.8
3,635,701	-		MIT1002_03264	0.21	+0.3
3,635,721	+		MIT1002_03264	0.23	+0.2
3,635,724	-		MIT1002_03264	0.24	-2.6
3,635,729	-		MIT1002_03264	0.24	-0.6
3,635,746	-		MIT1002_03264	0.26	+0.4
3,635,779	+		MIT1002_03264	0.30	+0.3
3,635,787	+		MIT1002_03264	0.31	-1.4
3,635,792	-		MIT1002_03264	0.31	-0.4
3,635,810	-		MIT1002_03264	0.34	+0.2
3,635,830	+		MIT1002_03264	0.36	+1.1
3,635,830	-		MIT1002_03264	0.36	+0.3
3,635,865	+		MIT1002_03264	0.40	-0.0
3,635,873	-		MIT1002_03264	0.41	-0.2
3,635,873	-		MIT1002_03264	0.41	+1.7
3,635,897	+		MIT1002_03264	0.44	-1.2
3,635,897	+		MIT1002_03264	0.44	+0.7
3,635,897	+		MIT1002_03264	0.44	-1.6
3,635,905	-		MIT1002_03264	0.44	-0.7
3,635,905	-		MIT1002_03264	0.44	+0.2
3,635,905	-		MIT1002_03264	0.44	-0.0
3,635,995	+		MIT1002_03264	0.55	-0.1
3,635,995	+		MIT1002_03264	0.55	+0.3
3,635,998	-		MIT1002_03264	0.55	+0.7
3,636,003	-		MIT1002_03264	0.56	+0.3
3,636,018	-		MIT1002_03264	0.57	+0.9
3,636,081	-		MIT1002_03264	0.65	+1.3
3,636,100	+		MIT1002_03264	0.67	+1.8
3,636,175	+		MIT1002_03264	0.76	+1.6
3,636,175	+		MIT1002_03264	0.76	+0.2
3,636,216	-		MIT1002_03264	0.80	-0.3
3,636,254	+		MIT1002_03264	0.85	-0.3
3,636,262	-		MIT1002_03264	0.86	-0.1
3,636,267	+		MIT1002_03264	0.86	+0.6
3,636,278	+		MIT1002_03264	0.87	+0.4
3,636,322	+				-0.2
3,636,330	-				-0.0
3,636,381	+				+1.8
3,636,387	+				-1.0
3,636,402	+				-0.1
3,636,407	+				+0.7
3,636,409	-				+0.1
3,636,409	-				+0.5
3,636,415	-				-0.7
3,636,415	-				+0.9
3,636,428	+				-0.9
3,636,498	+				-0.9
3,636,538	-				-0.6
3,636,603	-				-1.0
3,636,647	-				+0.2
3,636,679	-		MIT1002_03265	0.13	+0.5
3,636,719	+		MIT1002_03265	0.17	-1.4
3,636,724	-		MIT1002_03265	0.18	+0.1
3,636,729	-		MIT1002_03265	0.19	-0.7
3,636,754	+		MIT1002_03265	0.21	-0.7
3,636,762	-		MIT1002_03265	0.22	-1.5
3,636,775	-		MIT1002_03265	0.24	+0.4
3,636,840	-		MIT1002_03265	0.31	-0.6
3,636,844	+		MIT1002_03265	0.32	-1.0
3,636,853	+		MIT1002_03265	0.33	+1.1
3,636,861	-		MIT1002_03265	0.34	+0.2
3,636,891	-		MIT1002_03265	0.37	+0.6
3,636,994	+		MIT1002_03265	0.49	-2.5
3,637,002	+		MIT1002_03265	0.50	-0.5
3,637,002	+		MIT1002_03265	0.50	-0.8
3,637,002	+		MIT1002_03265	0.50	+0.5
3,637,002	+		MIT1002_03265	0.50	-0.8
3,637,003	-		MIT1002_03265	0.50	+1.1
3,637,003	-		MIT1002_03265	0.50	-1.2
3,637,010	-		MIT1002_03265	0.51	-0.1
3,637,081	-		MIT1002_03265	0.59	+0.2
3,637,081	-		MIT1002_03265	0.59	-1.9
3,637,085	-		MIT1002_03265	0.60	+0.1
3,637,096	+		MIT1002_03265	0.61	-0.4
3,637,116	+		MIT1002_03265	0.63	-0.3
3,637,124	+		MIT1002_03265	0.64	+0.7
3,637,147	-		MIT1002_03265	0.67	-1.1
3,637,170	+		MIT1002_03265	0.70	-0.9
3,637,198	+		MIT1002_03265	0.73	-2.0
3,637,305	+		MIT1002_03265	0.85	-1.4
3,637,313	-		MIT1002_03265	0.86	-0.2
3,637,337	+		MIT1002_03265	0.89	+0.0