Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03002

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
3,343,630	-				-1.2
3,343,679	-				-0.6
3,343,939	-		MIT1002_03002	0.12	-2.0
3,343,949	+		MIT1002_03002	0.12	+1.1
3,344,028	+		MIT1002_03002	0.16	-0.8
3,344,163	-		MIT1002_03002	0.23	+0.6
3,344,417	+		MIT1002_03002	0.35	-2.0
3,344,462	-		MIT1002_03002	0.37	-0.2
3,344,571	+		MIT1002_03002	0.43	+0.3
3,344,579	-		MIT1002_03002	0.43	+0.9
3,344,623	-		MIT1002_03002	0.45	+0.1
3,344,635	-		MIT1002_03002	0.46	+0.6
3,344,678	+		MIT1002_03002	0.48	-1.4
3,344,741	-		MIT1002_03002	0.51	-1.1
3,345,078	+		MIT1002_03002	0.67	-1.4
3,345,254	+		MIT1002_03002	0.76	-1.1
3,345,409	+		MIT1002_03002	0.83	-2.0
3,346,079	+		MIT1002_03003	0.12	-0.2
3,346,271	-		MIT1002_03003	0.19	-0.5
3,346,342	-		MIT1002_03003	0.21	-0.9
3,346,599	-		MIT1002_03003	0.31	-2.0
3,346,685	+		MIT1002_03003	0.34	+0.6
3,346,716	+		MIT1002_03003	0.35	-0.2