Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02747

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
3,048,900	+				+0.6
3,048,901	+				-0.6
3,048,901	+				-2.4
3,048,913	+				-1.1
3,048,916	-				-0.0
3,048,927	+				+1.0
3,048,946	+				+1.5
3,049,169	+		MIT1002_02746	0.26	-2.2
3,049,169	+		MIT1002_02746	0.26	-1.7
3,049,172	+		MIT1002_02746	0.27	-0.7
3,049,246	-		MIT1002_02746	0.36	+0.6
3,049,270	-		MIT1002_02746	0.40	-1.5
3,049,282	-		MIT1002_02746	0.41	+0.3
3,049,282	-		MIT1002_02746	0.41	-0.5
3,049,359	+		MIT1002_02746	0.51	+0.7
3,049,389	-		MIT1002_02746	0.55	-1.6
3,049,413	+		MIT1002_02746	0.59	-0.2
3,049,421	-		MIT1002_02746	0.60	+0.0
3,049,455	-		MIT1002_02746	0.64	-0.6
3,049,485	-		MIT1002_02746	0.68	+0.4
3,049,497	-		MIT1002_02746	0.70	+1.3
3,049,564	-		MIT1002_02746	0.79	-1.6
3,049,628	+		MIT1002_02746	0.87	-0.5
3,049,628	+		MIT1002_02746	0.87	-1.8
3,049,634	+		MIT1002_02746	0.88	+0.6
3,049,636	-		MIT1002_02746	0.88	+0.2
3,049,669	+				+1.5
3,049,674	+				+0.4
3,049,687	-				-0.1
3,049,687	-				-0.1
3,049,755	+				+1.6
3,049,814	-				+0.2
3,049,836	-				-1.0
3,049,849	+		MIT1002_02747	0.11	+1.6
3,049,849	+		MIT1002_02747	0.11	-1.1
3,049,882	-		MIT1002_02747	0.14	+1.0
3,049,929	-		MIT1002_02747	0.18	+0.5
3,049,929	-		MIT1002_02747	0.18	-0.0
3,049,931	-		MIT1002_02747	0.18	-0.8
3,049,945	+		MIT1002_02747	0.20	+1.5
3,049,953	-		MIT1002_02747	0.20	-1.6
3,049,970	+		MIT1002_02747	0.22	+2.6
3,050,045	-		MIT1002_02747	0.28	-2.9
3,050,070	-		MIT1002_02747	0.31	-1.3
3,050,071	-		MIT1002_02747	0.31	+1.9
3,050,084	+		MIT1002_02747	0.32	-0.9
3,050,155	+		MIT1002_02747	0.38	-0.5
3,050,168	-		MIT1002_02747	0.39	+5.7
3,050,199	-		MIT1002_02747	0.42	-1.2
3,050,199	-		MIT1002_02747	0.42	-1.7
3,050,254	-		MIT1002_02747	0.47	+0.9
3,050,347	+		MIT1002_02747	0.55	+0.0
3,050,347	+		MIT1002_02747	0.55	+0.6
3,050,377	+		MIT1002_02747	0.58	-0.7
3,050,378	-		MIT1002_02747	0.58	+0.5
3,050,392	+		MIT1002_02747	0.59	-0.4
3,050,392	+		MIT1002_02747	0.59	-0.8
3,050,392	+		MIT1002_02747	0.59	-1.6
3,050,392	+		MIT1002_02747	0.59	-1.4
3,050,400	-		MIT1002_02747	0.60	+0.1
3,050,402	+		MIT1002_02747	0.60	+0.9
3,050,410	-		MIT1002_02747	0.61	-0.9
3,050,410	-		MIT1002_02747	0.61	+0.6
3,050,428	-		MIT1002_02747	0.62	-0.0
3,050,758	+				-0.5
3,050,790	+				+0.3
3,050,805	-				-0.7
3,050,942	-				-0.7
3,051,135	-		MIT1002_02748	0.13	+0.2
3,051,137	+		MIT1002_02748	0.13	+0.5
3,051,181	+		MIT1002_02748	0.19	-1.6
3,051,256	+		MIT1002_02748	0.28	-0.8
3,051,299	+		MIT1002_02748	0.33	-0.0
3,051,417	+		MIT1002_02748	0.47	-0.1
3,051,477	+		MIT1002_02748	0.54	-1.2
3,051,483	-		MIT1002_02748	0.55	-0.0
3,051,485	+		MIT1002_02748	0.55	+1.1
3,051,493	-		MIT1002_02748	0.56	+0.4
3,051,496	+		MIT1002_02748	0.56	-0.6
3,051,542	+		MIT1002_02748	0.62	-0.8
3,051,542	+		MIT1002_02748	0.62	-1.3
3,051,550	-		MIT1002_02748	0.63	+0.3
3,051,623	+		MIT1002_02748	0.72	-0.7
3,051,642	+		MIT1002_02748	0.74	+0.3
3,051,762	+		MIT1002_02748	0.88	-1.0
3,051,762	+		MIT1002_02748	0.88	-0.1
3,051,762	+		MIT1002_02748	0.88	-0.3
3,051,762	+		MIT1002_02748	0.88	+1.1
3,051,774	+		MIT1002_02748	0.90	-1.8
3,051,801	+				-1.1
3,051,801	+				+0.1
3,051,809	-				-0.3
3,051,821	-				+0.5
3,051,821	-				-1.2
3,051,821	-				+0.1
3,051,826	-				-1.3
3,051,826	-				-1.3
3,051,838	+				+1.6
3,051,853	+				+0.2