Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02721

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
3,024,581	+				+1.9
3,024,624	+				+1.7
3,024,632	-				-1.0
3,024,721	+				+0.4
3,024,758	+				-0.3
3,024,758	+				+0.9
3,024,807	-				+0.0
3,024,886	+		MIT1002_02721	0.19	+0.6
3,024,921	+		MIT1002_02721	0.23	-1.1
3,024,939	-		MIT1002_02721	0.25	-0.4
3,024,946	-		MIT1002_02721	0.26	+0.3
3,024,976	-		MIT1002_02721	0.29	+0.6
3,025,010	-		MIT1002_02721	0.33	-1.7
3,025,012	+		MIT1002_02721	0.33	-0.1
3,025,012	+		MIT1002_02721	0.33	+1.8
3,025,012	+		MIT1002_02721	0.33	+0.3
3,025,012	+		MIT1002_02721	0.33	+1.6
3,025,020	-		MIT1002_02721	0.34	+0.6
3,025,031	+		MIT1002_02721	0.35	+0.7
3,025,032	-		MIT1002_02721	0.35	+0.6
3,025,032	-		MIT1002_02721	0.35	+2.1
3,025,041	+		MIT1002_02721	0.36	+1.0
3,025,051	+		MIT1002_02721	0.38	+0.2
3,025,059	-		MIT1002_02721	0.38	-2.3
3,025,059	-		MIT1002_02721	0.38	+0.9
3,025,142	+		MIT1002_02721	0.48	+1.5
3,025,150	+		MIT1002_02721	0.49	-2.0
3,025,150	+		MIT1002_02721	0.49	-0.8
3,025,158	-		MIT1002_02721	0.50	+0.7
3,025,165	-		MIT1002_02721	0.51	+0.2
3,025,181	-		MIT1002_02721	0.52	+0.3
3,025,277	+		MIT1002_02721	0.63	+1.7
3,025,418	+		MIT1002_02721	0.80	+2.4
3,025,509	-				-1.3
3,025,529	+				-0.2
3,025,536	-				-1.3
3,025,544	+				+0.3
3,025,560	-				+3.2
3,025,581	-				-0.5
3,025,606	+				-1.5
3,025,635	-				-0.0
3,025,662	-		MIT1002_02722	0.13	+0.4
3,025,687	-		MIT1002_02722	0.20	-0.8
3,025,753	-		MIT1002_02722	0.36	-2.3
3,025,755	+		MIT1002_02722	0.37	-1.8
3,025,763	+		MIT1002_02722	0.39	+0.7
3,025,815	-		MIT1002_02722	0.52	-0.4
3,025,870	+		MIT1002_02722	0.66	-0.3
3,025,915	+		MIT1002_02722	0.77	-0.4
3,025,923	-		MIT1002_02722	0.79	+0.3
3,026,022	-				+0.1
3,026,024	+				-2.0
3,026,042	+				-0.5
3,026,050	-				+0.7
3,026,050	-				+0.9
3,026,055	-				-0.8
3,026,131	-				+0.7
3,026,141	+				+1.0
3,026,149	-				+2.0
3,026,194	-		MIT1002_02723	0.27	-1.1
3,026,210	+		MIT1002_02723	0.33	+0.6
3,026,444	+				-1.4
3,026,471	+				-0.4
3,026,472	+				-0.2