Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02514

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
2,803,373	+		MIT1002_02513	0.67	-0.1
2,803,388	+		MIT1002_02513	0.68	-0.1
2,803,429	-		MIT1002_02513	0.70	-2.7
2,803,431	+		MIT1002_02513	0.70	+1.5
2,803,439	-		MIT1002_02513	0.70	-0.3
2,803,478	-		MIT1002_02513	0.72	+0.5
2,803,507	+		MIT1002_02513	0.74	-0.8
2,803,515	-		MIT1002_02513	0.74	+0.3
2,803,549	-		MIT1002_02513	0.76	+0.1
2,803,698	-		MIT1002_02513	0.83	-4.0
2,803,727	-		MIT1002_02513	0.84	-1.7
2,803,818	-		MIT1002_02513	0.89	-0.6
2,803,818	-		MIT1002_02513	0.89	-0.1
2,803,818	-		MIT1002_02513	0.89	-0.9
2,803,826	+		MIT1002_02513	0.89	+1.1
2,803,929	+				+0.5
2,803,943	+				-0.5
2,803,953	+				-1.1
2,803,956	-				-1.1
2,803,961	-				+1.3
2,803,961	-				+0.5
2,803,961	-				+0.2
2,803,961	-				+0.5
2,803,961	-				+0.2
2,804,242	-				-1.1
2,804,242	-				+0.3
2,804,243	-				-1.0
2,804,254	+				-0.1
2,804,428	+				-0.8
2,804,469	+		MIT1002_02514	0.13	-0.1
2,804,477	-		MIT1002_02514	0.14	-0.7
2,804,547	-		MIT1002_02514	0.21	+0.8
2,804,579	-		MIT1002_02514	0.24	+0.5
2,804,648	-		MIT1002_02514	0.31	+0.9
2,804,650	+		MIT1002_02514	0.31	+0.7
2,804,714	+		MIT1002_02514	0.37	+0.2
2,804,719	+		MIT1002_02514	0.38	-0.7
2,804,737	-		MIT1002_02514	0.40	+1.1
2,804,737	-		MIT1002_02514	0.40	+0.5
2,804,737	-		MIT1002_02514	0.40	+0.0
2,804,740	+		MIT1002_02514	0.40	-1.0
2,804,770	+		MIT1002_02514	0.43	+0.1
2,804,802	+		MIT1002_02514	0.46	+2.5
2,804,802	+		MIT1002_02514	0.46	+0.4
2,805,080	+		MIT1002_02514	0.73	+0.1
2,805,185	+		MIT1002_02514	0.84	-0.9
2,805,299	+				-0.0
2,805,309	+				+1.9
2,805,309	+				-0.9
2,805,317	-				+0.2
2,805,317	-				+1.8
2,805,317	-				-0.7
2,805,328	+				+0.3
2,805,336	-				+0.7
2,805,460	+				-0.6
2,805,506	-				-0.1
2,805,628	+		MIT1002_02515	0.19	-0.2
2,805,692	-		MIT1002_02515	0.26	+0.6
2,805,697	-		MIT1002_02515	0.27	+3.3
2,805,883	+		MIT1002_02515	0.47	-0.5
2,805,933	-		MIT1002_02515	0.52	-0.1
2,806,024	+		MIT1002_02515	0.62	+0.9
2,806,035	+		MIT1002_02515	0.63	-1.7
2,806,036	+		MIT1002_02515	0.63	+1.5
2,806,036	+		MIT1002_02515	0.63	-0.4
2,806,043	-		MIT1002_02515	0.64	-0.9
2,806,136	-		MIT1002_02515	0.74	-0.7
2,806,166	-		MIT1002_02515	0.77	+2.5
2,806,197	+		MIT1002_02515	0.81	-0.1
2,806,212	-		MIT1002_02515	0.82	+1.9
2,806,253	-		MIT1002_02515	0.87	-0.1
2,806,286	+				-0.8