Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02250

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
2,506,486	+				-1.8
2,506,493	+				+0.8
2,506,504	+				-0.0
2,506,512	-				-0.4
2,506,522	-				+1.6
2,506,537	+				+0.5
2,506,562	-				+2.3
2,506,680	-		MIT1002_02248	0.35	-1.3
2,506,714	+		MIT1002_02248	0.47	+0.6
2,506,724	+		MIT1002_02248	0.51	+0.1
2,506,756	+		MIT1002_02248	0.63	+0.0
2,506,781	-		MIT1002_02248	0.72	+1.4
2,506,861	+				+0.4
2,506,924	+				-0.9
2,506,950	+				+0.4
2,507,123	-		MIT1002_02249	0.33	+1.0
2,507,138	+		MIT1002_02249	0.37	+0.5
2,507,190	-		MIT1002_02249	0.52	+0.2
2,507,266	-		MIT1002_02249	0.74	+1.6
2,507,307	-		MIT1002_02249	0.85	-0.7
2,507,317	+		MIT1002_02249	0.88	-0.5
2,507,324	+				-0.6
2,507,324	+				-0.8
2,507,385	-				-1.5
2,507,433	+				-1.0
2,507,433	+				-0.0
2,507,444	+				-0.1
2,507,444	+				+0.9
2,507,452	-				+0.6
2,507,456	+				+1.1
2,507,519	-				+0.7
2,507,520	-		MIT1002_02250	0.10	-0.7
2,507,651	+		MIT1002_02250	0.42	-0.5
2,507,688	+		MIT1002_02250	0.51	-0.0
2,507,723	-		MIT1002_02250	0.59	-0.1
2,507,776	-		MIT1002_02250	0.72	-1.1
2,507,807	+		MIT1002_02250	0.80	-0.1
2,507,807	+		MIT1002_02250	0.80	+1.3
2,507,825	+		MIT1002_02250	0.84	-0.5
2,507,825	+		MIT1002_02250	0.84	-0.2
2,507,833	-		MIT1002_02250	0.86	+0.1
2,507,857	+				-0.5
2,507,857	+				+1.4
2,507,865	-				+0.2
2,507,865	-				-0.3
2,507,868	+				+0.5
2,507,876	-				-0.5
2,507,876	-				-0.5
2,507,876	-				+0.5
2,507,919	+				+0.8
2,507,968	-				+0.2
2,507,985	-				-1.2
2,508,056	+		MIT1002_02251	0.13	-0.4
2,508,175	+		MIT1002_02251	0.46	-1.4
2,508,192	-		MIT1002_02251	0.51	-0.3
2,508,243	+		MIT1002_02251	0.64	+1.1
2,508,243	+		MIT1002_02251	0.64	-1.6
2,508,243	+		MIT1002_02251	0.64	+0.1
2,508,243	+		MIT1002_02251	0.64	-0.3
2,508,251	-		MIT1002_02251	0.67	+0.5
2,508,251	-		MIT1002_02251	0.67	+0.6
2,508,251	-		MIT1002_02251	0.67	-0.3
2,508,251	-		MIT1002_02251	0.67	+0.7
2,508,251	-		MIT1002_02251	0.67	-0.0
2,508,253	+		MIT1002_02251	0.67	+0.9
2,508,283	+		MIT1002_02251	0.75	+2.0
2,508,359	+				-1.1
2,508,359	+				-0.7
2,508,359	+				+0.7
2,508,367	-				+0.1
2,508,367	-				+1.0
2,508,367	-				+0.5
2,508,367	-				-0.2
2,508,367	-				+1.1
2,508,371	+				-0.1
2,508,377	+				-0.2
2,508,377	+				-0.9
2,508,379	-				+2.0
2,508,385	-				+1.5
2,508,442	-				-0.6
2,508,523	-				-0.3
2,508,574	+				+0.4
2,508,582	-				+0.5
2,508,586	+				+0.2
2,508,586	+				+1.7
2,508,594	-				-0.9
2,508,594	-				-0.5
2,508,594	-				-0.4
2,508,610	+				+0.6
2,508,655	+				-0.9
2,508,673	-				+0.6
2,508,701	+				-2.2
2,508,708	-				+1.2
2,508,789	+				+1.3
2,508,797	-				-1.3
2,508,820	-				-0.1
2,508,820	-				+0.3
2,508,825	-				-1.5
2,508,843	+				+1.9
2,508,851	-				-1.9