Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02167

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
2,422,012	-		MIT1002_02165	0.65	+1.2
2,422,017	-		MIT1002_02165	0.65	+0.7
2,422,034	-		MIT1002_02165	0.66	+0.2
2,422,036	+		MIT1002_02165	0.66	-0.0
2,422,052	-		MIT1002_02165	0.67	-2.8
2,422,053	+		MIT1002_02165	0.67	-1.2
2,422,053	+		MIT1002_02165	0.67	+0.0
2,422,061	-		MIT1002_02165	0.68	-0.7
2,422,061	-		MIT1002_02165	0.68	+0.1
2,422,061	-		MIT1002_02165	0.68	-0.5
2,422,107	+		MIT1002_02165	0.71	-1.5
2,422,153	-		MIT1002_02165	0.74	+1.7
2,422,169	-		MIT1002_02165	0.75	+1.0
2,422,174	-		MIT1002_02165	0.76	-1.1
2,422,176	+		MIT1002_02165	0.76	-1.5
2,422,226	-		MIT1002_02165	0.79	-0.0
2,422,437	+				+1.1
2,422,445	-				-0.6
2,422,526	+				-0.1
2,422,536	+				+0.3
2,422,536	+				+0.0
2,422,536	+				+2.7
2,422,573	-				+0.3
2,422,855	+				+0.5
2,422,859	+				-0.5
2,422,867	-				-0.1
2,423,023	+				-1.9
2,423,023	+				-0.1
2,423,079	+		MIT1002_02167	0.11	-1.0
2,423,079	+		MIT1002_02167	0.11	+1.3
2,423,079	+		MIT1002_02167	0.11	-1.0
2,423,079	+		MIT1002_02167	0.11	-1.6
2,423,102	+		MIT1002_02167	0.14	+1.3
2,423,126	+		MIT1002_02167	0.18	+0.8
2,423,318	+		MIT1002_02167	0.47	+2.1
2,423,334	+		MIT1002_02167	0.49	-0.2
2,423,342	+		MIT1002_02167	0.50	+0.1
2,423,435	+		MIT1002_02167	0.64	-2.7
2,423,490	+		MIT1002_02167	0.73	-2.3
2,423,497	+		MIT1002_02167	0.74	-0.5