Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01396

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
1,546,180	+		MIT1002_01395	0.11	+0.4
1,546,205	-		MIT1002_01395	0.13	-0.3
1,546,408	+		MIT1002_01395	0.34	+0.2
1,546,408	+		MIT1002_01395	0.34	+0.0
1,546,408	+		MIT1002_01395	0.34	+0.6
1,546,408	+		MIT1002_01395	0.34	-0.4
1,546,408	+		MIT1002_01395	0.34	-0.2
1,546,414	+		MIT1002_01395	0.35	+0.3
1,546,416	-		MIT1002_01395	0.35	-1.3
1,546,416	-		MIT1002_01395	0.35	+0.3
1,546,416	-		MIT1002_01395	0.35	+1.8
1,546,416	-		MIT1002_01395	0.35	+0.7
1,546,416	-		MIT1002_01395	0.35	+0.1
1,546,439	+		MIT1002_01395	0.37	+0.6
1,546,447	-		MIT1002_01395	0.38	+1.9
1,546,471	+		MIT1002_01395	0.41	+1.7
1,546,490	-		MIT1002_01395	0.43	+0.4
1,546,526	+		MIT1002_01395	0.46	+0.7
1,546,557	-		MIT1002_01395	0.49	+0.8
1,546,613	-		MIT1002_01395	0.55	+0.2
1,546,638	+		MIT1002_01395	0.58	-0.3
1,546,677	+		MIT1002_01395	0.62	-0.6
1,546,774	-		MIT1002_01395	0.72	-1.5
1,546,844	+		MIT1002_01395	0.79	-0.2
1,547,034	+				-0.3
1,547,054	+				+0.2
1,547,181	+				+0.5
1,547,286	+		MIT1002_01396	0.21	-0.1
1,547,340	+		MIT1002_01396	0.31	+1.3
1,547,341	-		MIT1002_01396	0.31	-0.8
1,547,355	+		MIT1002_01396	0.34	+2.7
1,547,355	+		MIT1002_01396	0.34	-0.8
1,547,355	+		MIT1002_01396	0.34	+0.9
1,547,362	+		MIT1002_01396	0.35	-0.3
1,547,363	-		MIT1002_01396	0.36	+0.3
1,547,380	+		MIT1002_01396	0.39	+0.5
1,547,421	+		MIT1002_01396	0.47	-1.3
1,547,450	+		MIT1002_01396	0.52	+1.3
1,547,450	-		MIT1002_01396	0.52	+0.5
1,547,501	+		MIT1002_01396	0.62	+0.7
1,547,501	+		MIT1002_01396	0.62	-1.3
1,547,507	+		MIT1002_01396	0.63	+0.8
1,547,509	-		MIT1002_01396	0.63	+0.0
1,547,515	+		MIT1002_01396	0.64	+0.2
1,547,515	-		MIT1002_01396	0.64	-0.0
1,547,515	-		MIT1002_01396	0.64	+1.4
1,547,557	-		MIT1002_01396	0.72	-0.9
1,547,557	-		MIT1002_01396	0.72	-0.0
1,547,661	+				+1.1
1,547,700	-				-0.6
1,547,778	+				+2.0
1,547,864	+				-0.9
1,547,872	-				+0.7
1,547,872	-				+1.0
1,547,965	+		MIT1002_01397	0.13	-2.6
1,547,965	+		MIT1002_01397	0.13	-1.8
1,547,965	+		MIT1002_01397	0.13	-0.9
1,547,973	-		MIT1002_01397	0.14	+2.0
1,547,973	-		MIT1002_01397	0.14	+0.1
1,547,989	+		MIT1002_01397	0.15	+0.8
1,547,989	+		MIT1002_01397	0.15	+1.0
1,547,989	+		MIT1002_01397	0.15	+0.4
1,547,989	+		MIT1002_01397	0.15	-6.4
1,547,997	-		MIT1002_01397	0.15	-1.0
1,547,997	-		MIT1002_01397	0.15	-0.4
1,547,997	-		MIT1002_01397	0.15	+0.3
1,547,997	-		MIT1002_01397	0.15	+0.5
1,548,007	-		MIT1002_01397	0.16	+2.3
1,548,073	-		MIT1002_01397	0.20	+1.0
1,548,121	-		MIT1002_01397	0.23	-2.0
1,548,199	+		MIT1002_01397	0.28	+0.6
1,548,262	-		MIT1002_01397	0.32	-0.5
1,548,320	-		MIT1002_01397	0.35	+3.2
1,548,322	+		MIT1002_01397	0.35	-0.6
1,548,389	-		MIT1002_01397	0.39	-0.0
1,548,509	-		MIT1002_01397	0.47	+0.4
1,548,509	-		MIT1002_01397	0.47	+0.1
1,548,567	+		MIT1002_01397	0.50	-0.7
1,548,593	+		MIT1002_01397	0.52	-1.1
1,548,601	-		MIT1002_01397	0.53	+2.4
1,548,603	+		MIT1002_01397	0.53	+0.6
1,548,604	-		MIT1002_01397	0.53	+0.6
1,548,606	-		MIT1002_01397	0.53	+0.5
1,548,606	-		MIT1002_01397	0.53	-1.4
1,548,606	-		MIT1002_01397	0.53	-0.1
1,548,611	-		MIT1002_01397	0.53	+0.2
1,548,623	-		MIT1002_01397	0.54	-0.2
1,548,662	-		MIT1002_01397	0.56	+0.6
1,548,683	-		MIT1002_01397	0.58	-0.2