Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01312

Experiment: monoculture; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 3
1,457,817	+				+1.6
1,457,856	-				-2.0
1,457,937	+		MIT1002_01312	0.15	-1.4
1,457,945	-		MIT1002_01312	0.16	+0.8
1,457,965	+		MIT1002_01312	0.19	+0.1
1,458,024	+		MIT1002_01312	0.29	-0.1
1,458,068	-		MIT1002_01312	0.36	+0.9
1,458,073	-		MIT1002_01312	0.36	-2.6
1,458,075	+		MIT1002_01312	0.37	-0.3
1,458,089	+		MIT1002_01312	0.39	-0.7
1,458,133	+		MIT1002_01312	0.46	+0.8
1,458,141	-		MIT1002_01312	0.47	-0.1
1,458,141	-		MIT1002_01312	0.47	-0.7
1,458,141	-		MIT1002_01312	0.47	-0.1
1,458,209	+		MIT1002_01312	0.58	+0.7
1,458,265	+		MIT1002_01312	0.67	-1.7
1,458,265	+		MIT1002_01312	0.67	-0.6
1,458,326	+		MIT1002_01312	0.77	+0.9
1,458,326	+		MIT1002_01312	0.77	-0.6
1,458,334	-		MIT1002_01312	0.78	+1.6
1,458,336	+		MIT1002_01312	0.78	-0.6
1,458,350	+		MIT1002_01312	0.80	+0.3
1,458,353	-		MIT1002_01312	0.81	-0.2
1,458,353	-		MIT1002_01312	0.81	-0.9
1,458,414	+				-0.4
1,458,419	+				+2.1
1,458,428	+				-0.6
1,458,430	-				-1.5
1,458,457	+				+1.9
1,458,473	+				-1.4
1,458,476	+				-0.2
1,458,476	+				-1.6
1,458,554	-				-0.7
1,458,561	-				-0.7
1,458,695	+		MIT1002_01313	0.17	-1.1
1,458,703	-		MIT1002_01313	0.18	-3.2
1,458,724	+		MIT1002_01313	0.21	+0.3
1,458,787	-		MIT1002_01313	0.30	-1.7
1,458,901	+		MIT1002_01313	0.46	+0.4
1,458,903	-		MIT1002_01313	0.46	-3.4
1,459,091	-		MIT1002_01313	0.73	-1.4
1,459,128	+		MIT1002_01313	0.78	+1.6
1,459,138	+		MIT1002_01313	0.79	+0.8
1,459,141	+		MIT1002_01313	0.79	-0.9
1,459,149	-		MIT1002_01313	0.81	+0.5
1,459,185	-		MIT1002_01313	0.86	-0.2
1,459,192	-		MIT1002_01313	0.87	+0.9
1,459,252	+				+0.3
1,459,262	+				-0.5
1,459,262	+				-0.8
1,459,262	+				-0.2
1,459,262	+				+0.9
1,459,262	+				-0.7
1,459,262	+				-1.3
1,459,270	-				-1.2
1,459,270	-				-2.4
1,459,450	-				-2.9
1,459,452	+				+1.6